mRNA_H-canaliculatus_M_contigs7481.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.240e-52 Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1
Query: 10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
+EPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVL NR+Q +GNIAPTAHKLGGKDLPHGPLS YVEAQVKKRLE AYEAEA E+G+P+ QV
Sbjct: 1529 EEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLNNRRQ-AGNIAPTAHKLGGKDLPHGPLSAYVEAQVKKRLEAAYEAEAKERGVPLDQV 1624
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT9_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.730e-27 Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1
Query: 4 LLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAA 273
L +EPW EC C+RW HQ CALFN+R+N H+ + CP C+L R++ G+ APTA KLGG D+PH P+S ++E VK RL+ Y AA
Sbjct: 368 LQEEPWAECTDCRRWTHQACALFNARRNVHDDVPFSCPECILAKRRRAGGSAAPTARKLGGDDIPHTPMSQFIEDAVKARLQRCYAESAA 457
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5R4_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 3.010e-23 Identity = 45/90 (50.00%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEK 279
+EPWVECDSCKRWVHQICALFN RKN E Y+CP C+ R++ + PT + KD+ H S Y+E V+K+LE Y+ A E+
Sbjct: 124 EEPWVECDSCKRWVHQICALFNGRKNQVETTVYHCPLCIEATRRKLRQEM-PTVNIKRAKDIMHTKFSLYIETAVRKKLELEYDKVAVER 212
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 4.490e-21 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 1
Query: 121 CVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
C R R+GNIAPTAHKLGGKDLPHGPLS YVEAQVKKRL+ AYEAEA E+G+PV QV
Sbjct: 637 CERSRRGTRAGNIAPTAHKLGGKDLPHGPLSAYVEAQVKKRLDAAYEAEAKERGVPVDQV 696
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXC2_9ARCH) HSP 1 Score: 89.7 bits (221), Expect = 2.600e-20 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 1
Query: 13 EPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIA--PTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEK 279
E WV+C+SC+RWVHQ+C+LFNSR+N + S+ CP C+ RK + PT K+ DLP LS ++E ++ KRL+ AYE E AEK
Sbjct: 25 EGWVQCESCQRWVHQVCSLFNSRRNVGDEVSFVCPTCLCAKRKTDPEKVLVMPTTKKMKASDLPVTTLSEFLEKRIFKRLQIAYE-ETAEK 114
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4U4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.940e-20 Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPV 291
+EPWV CD C RWVHQ+CALFN RKN + Y+CP CV ++R +R + +PT G D+ H S ++E +V +L AY+A AE G P+
Sbjct: 217 EEPWVGCDQCSRWVHQVCALFNGRKNQVDSTVYHCPFCVEQDRIKRKDD-SPTVKIPGAADVAHTKFSKFIEDRVFSKLTDAYKAREAETGKPL 309
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5Q0_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.890e-19 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 4 LLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGI 285
+++E WV+CD C+RW+HQIC LFN+R+N H+ Y CP C+L RK P G +LP LS ++EA+VKK++E + A+EK +
Sbjct: 945 IVEESWVQCDICERWIHQICGLFNTRQNKEHHSEYCCPLCLLDKRKV--DKKPPLPRPAGATELPRTKLSEFIEARVKKKIEGRQQKVASEKSL 1036
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MH41_RHIMU) HSP 1 Score: 90.1 bits (222), Expect = 6.520e-19 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
+EPWV+CD CK W HQICALFN ++++ A Y CP C L + + + P A LG KDLP LS Y+E ++ +RL+ E A G+ V +V
Sbjct: 804 EEPWVQCDKCKEWQHQICALFNDKRDTGGKAGYICPKCCLIDMESKRLIPLPKAAVLGAKDLPKSLLSDYIELRLSRRLQQEREERANTTGMDVNEV 900
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQN1_FISSO) HSP 1 Score: 90.1 bits (222), Expect = 6.540e-19 Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLE 249
+E WV+CD C+RWVHQICALFN+R+N + + Y CP C ++ RK+R GN+ T+ +DLP +S Y+E+ V+++++
Sbjct: 717 EESWVQCDRCERWVHQICALFNTRQNKDQRSEYACPRCTIEERKKR-GNLEATSSSPMAEDLPRTKMSQYLESHVRQKVD 795
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAP6_CYCTE) HSP 1 Score: 84.3 bits (207), Expect = 7.900e-19 Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 1
Query: 4 LLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
L +E WV+CD C WVHQICALFN RKN ASY CP C L ++ +SG G +DLPH +S +E ++ L+ AYE A +G+ V QV
Sbjct: 21 LPEEAWVQCDKCDSWVHQICALFNGRKNKTA-ASYLCPKCHL-DKVSKSGEETSDEVMKGARDLPHCFMSQALEKGLESALQRAYEERARGQGVNVDQV 117 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7481.2.1 >prot_H-canaliculatus_M_contigs7481.2.1 ID=prot_H-canaliculatus_M_contigs7481.2.1|Name=mRNA_H-canaliculatus_M_contigs7481.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=100bp RLLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSback to top mRNA from alignment at H-canaliculatus_M_contigs7481:4076..5253+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7481.2.1 ID=mRNA_H-canaliculatus_M_contigs7481.2.1|Name=mRNA_H-canaliculatus_M_contigs7481.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1178bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7481:4076..5253+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7481:4076..5253+ >mRNA_H-canaliculatus_M_contigs7481.2.1 ID=mRNA_H-canaliculatus_M_contigs7481.2.1|Name=mRNA_H-canaliculatus_M_contigs7481.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=300bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7481:4076..5253+ (Hapterophycus canaliculatus Oshoro7m male)back to top |