mRNA_H-canaliculatus_M_contigs7481.2.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7481.2.1
Unique NamemRNA_H-canaliculatus_M_contigs7481.2.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.240e-52
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1
Query:   10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
            +EPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVL NR+Q +GNIAPTAHKLGGKDLPHGPLS YVEAQVKKRLE AYEAEA E+G+P+ QV
Sbjct: 1529 EEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLNNRRQ-AGNIAPTAHKLGGKDLPHGPLSAYVEAQVKKRLEAAYEAEAKERGVPLDQV 1624          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGT9_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.730e-27
Identity = 46/90 (51.11%), Postives = 61/90 (67.78%), Query Frame = 1
Query:    4 LLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAA 273
            L +EPW EC  C+RW HQ CALFN+R+N H+   + CP C+L  R++  G+ APTA KLGG D+PH P+S ++E  VK RL+  Y   AA
Sbjct:  368 LQEEPWAECTDCRRWTHQACALFNARRNVHDDVPFSCPECILAKRRRAGGSAAPTARKLGGDDIPHTPMSQFIEDAVKARLQRCYAESAA 457          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B5R4_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.010e-23
Identity = 45/90 (50.00%), Postives = 58/90 (64.44%), Query Frame = 1
Query:   10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEK 279
            +EPWVECDSCKRWVHQICALFN RKN  E   Y+CP C+   R++    + PT +    KD+ H   S Y+E  V+K+LE  Y+  A E+
Sbjct:  124 EEPWVECDSCKRWVHQICALFNGRKNQVETTVYHCPLCIEATRRKLRQEM-PTVNIKRAKDIMHTKFSLYIETAVRKKLELEYDKVAVER 212          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 4.490e-21
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 1
Query:  121 CVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
            C    R  R+GNIAPTAHKLGGKDLPHGPLS YVEAQVKKRL+ AYEAEA E+G+PV QV
Sbjct:  637 CERSRRGTRAGNIAPTAHKLGGKDLPHGPLSAYVEAQVKKRLDAAYEAEAKERGVPVDQV 696          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RXC2_9ARCH)

HSP 1 Score: 89.7 bits (221), Expect = 2.600e-20
Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 1
Query:   13 EPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIA--PTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEK 279
            E WV+C+SC+RWVHQ+C+LFNSR+N  +  S+ CP C+   RK     +   PT  K+   DLP   LS ++E ++ KRL+ AYE E AEK
Sbjct:   25 EGWVQCESCQRWVHQVCSLFNSRRNVGDEVSFVCPTCLCAKRKTDPEKVLVMPTTKKMKASDLPVTTLSEFLEKRIFKRLQIAYE-ETAEK 114          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4U4_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.940e-20
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 1
Query:   10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPV 291
            +EPWV CD C RWVHQ+CALFN RKN  +   Y+CP CV ++R +R  + +PT    G  D+ H   S ++E +V  +L  AY+A  AE G P+
Sbjct:  217 EEPWVGCDQCSRWVHQVCALFNGRKNQVDSTVYHCPFCVEQDRIKRKDD-SPTVKIPGAADVAHTKFSKFIEDRVFSKLTDAYKAREAETGKPL 309          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5Q0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.890e-19
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1
Query:    4 LLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGI 285
            +++E WV+CD C+RW+HQIC LFN+R+N   H+ Y CP C+L  RK       P     G  +LP   LS ++EA+VKK++E   +  A+EK +
Sbjct:  945 IVEESWVQCDICERWIHQICGLFNTRQNKEHHSEYCCPLCLLDKRKV--DKKPPLPRPAGATELPRTKLSEFIEARVKKKIEGRQQKVASEKSL 1036          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=2 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MH41_RHIMU)

HSP 1 Score: 90.1 bits (222), Expect = 6.520e-19
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1
Query:   10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
            +EPWV+CD CK W HQICALFN ++++   A Y CP C L + + +     P A  LG KDLP   LS Y+E ++ +RL+   E  A   G+ V +V
Sbjct:  804 EEPWVQCDKCKEWQHQICALFNDKRDTGGKAGYICPKCCLIDMESKRLIPLPKAAVLGAKDLPKSLLSDYIELRLSRRLQQEREERANTTGMDVNEV 900          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQN1_FISSO)

HSP 1 Score: 90.1 bits (222), Expect = 6.540e-19
Identity = 36/80 (45.00%), Postives = 57/80 (71.25%), Query Frame = 1
Query:   10 QEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLE 249
            +E WV+CD C+RWVHQICALFN+R+N  + + Y CP C ++ RK+R GN+  T+     +DLP   +S Y+E+ V+++++
Sbjct:  717 EESWVQCDRCERWVHQICALFNTRQNKDQRSEYACPRCTIEERKKR-GNLEATSSSPMAEDLPRTKMSQYLESHVRQKVD 795          
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAP6_CYCTE)

HSP 1 Score: 84.3 bits (207), Expect = 7.900e-19
Identity = 45/99 (45.45%), Postives = 58/99 (58.59%), Query Frame = 1
Query:    4 LLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRSGNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV 300
            L +E WV+CD C  WVHQICALFN RKN    ASY CP C L ++  +SG         G +DLPH  +S  +E  ++  L+ AYE  A  +G+ V QV
Sbjct:   21 LPEEAWVQCDKCDSWVHQICALFNGRKNKTA-ASYLCPKCHL-DKVSKSGEETSDEVMKGARDLPHCFMSQALEKGLESALQRAYEERARGQGVNVDQV 117          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7481.2.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Histone1.240e-5287.63acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
Histone3.730e-2751.11acetyltransferase n=1 Tax=Tribonema minus TaxID=30... [more]
Histone3.010e-2350.00acetyltransferase (Fragment) n=1 Tax=Dictyocha spe... [more]
Histone4.490e-2176.67acetyltransferase n=1 Tax=Ectocarpus siliculosus T... [more]
Histone2.600e-2047.25acetyltransferase n=1 Tax=archaeon TaxID=1906665 R... [more]
Histone4.940e-2045.74acetyltransferase (Fragment) n=1 Tax=Rhizochromuli... [more]
Histone1.890e-1942.55acetyltransferase n=1 Tax=Pseudo-nitzschia multist... [more]
Histone6.520e-1943.30acetyltransferase n=2 Tax=Rhizophora mucronata Tax... [more]
Histone6.540e-1945.00acetyltransferase n=2 Tax=Fistulifera solaris TaxI... [more]
Histone7.900e-1945.45acetyltransferase (Fragment) n=1 Tax=Cyclophora te... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7481contigH-canaliculatus_M_contigs7481:4076..5253 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LPT9
PFAMsBromodomain,HAT_KAT11,PHD,ZZ,zf-TAZ
Model size300
Max annot lvl2759|Eukaryota
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting categoryother localisation
Exons2
Evalue7.36e-22
EggNOG OGsCOG5076@1|root,KOG1778@2759|Eukaryota
EC2.3.1.48
Descriptionhistone acetyltransferase activity
Cds size300
COG categoryBK
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854085.64768-CDS-H-canaliculatus_M_contigs7481:4075..42181696854085.64768-CDS-H-canaliculatus_M_contigs7481:4075..4218Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7481 4076..4218 +
1696854085.6632373-CDS-H-canaliculatus_M_contigs7481:5096..52531696854085.6632373-CDS-H-canaliculatus_M_contigs7481:5096..5253Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7481 5097..5253 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7481.2.1prot_H-canaliculatus_M_contigs7481.2.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7481 4076..5253 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7481.2.1

>prot_H-canaliculatus_M_contigs7481.2.1 ID=prot_H-canaliculatus_M_contigs7481.2.1|Name=mRNA_H-canaliculatus_M_contigs7481.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=100bp
RLLQEPWVECDSCKRWVHQICALFNSRKNSHEHASYYCPHCVLKNRKQRS
GNIAPTAHKLGGKDLPHGPLSTYVEAQVKKRLETAYEAEAAEKGIPVYQV
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mRNA from alignment at H-canaliculatus_M_contigs7481:4076..5253+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7481.2.1 ID=mRNA_H-canaliculatus_M_contigs7481.2.1|Name=mRNA_H-canaliculatus_M_contigs7481.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1178bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7481:4076..5253+ (Hapterophycus canaliculatus Oshoro7m male)
CGCCTCCTGCAGGAGCCGTGGGTCGAGTGCGACTCGTGCAAGCGCTGGGT CCACCAGATTTGCGCGCTGTTCAACAGCCGCAAGAACTCGCACGAGCACG CGAGCTACTACTGCCCGCACTGCGTCCTCAAGAACCGAAAGCAGTGAGTA GTCGTCTAACTTCGTAGTCTGTAGTCTGTTTTGCTTGCGGTCTACAAGTA TATAGCTTGCAGTCTGCATTGCTTGGAGTCTGTATTGCTTGCAGTCTGCA TTGCTTGGAGTATGTATTGCTTGCAGTCTGCATTGCTTGCAGTCTGCATT GCTTGCACCCCTTGTACCGCTCGTGCCGCTCGTGCCGCTCGCATTGCTTG TCTTCCTGCCGCTTGCCGCTGCTGCGGCCGGTACACGGTACTGTCGTCGC CACCGCTGCTCTTGTCTCCGCCAAGAGTCGCTCTTTCCGTCGCTGGGTAT TTCGCTACTACTACTGCTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGCTGTTGTTGTTGCTGTTGTTGCTGTTGCTGTTGCTGTTG CCGGCGCATGACCCTTCACCCAAGACTTCGAAGGAGAGTGGGCGTGCCTT GTTGGCTTGTCGTCTCTCATTGCTGAAAGTCGGAGGTCCTTTGATTTGGG GGGGCATAAACGACACAAACCTGTAGAGCGCTGTCCGAAGCGCGGCGGCG GGGCCCCTTGAAAGAGCGGCACTTGCTGCGGAGATCGGAGCGGAAGTACT CGTACCAGCTCTGACACAACAACTTCTTTGGTGCAAGTACATGTATTGTG CACGCAGTAAAGACGCATGGTGTCGCCCATTCGGAGAAAGCTCCCGCCCC GCTCCCGCACTCGGTGATCAGAATCCCTTTTACCGTAGAGCTTCATCAAA AACAAGCGGTCGAGGCGAAACGGTTTGAACCATGGGGTCAAGCAGGGTGG GGGCGGCAAGAGGAGTCGCCCTCGCTGCTTTCATCTGGCTAACGGCGCAC TTTTTTTCCTCGGCGTTGCAGAAGGTCCGGCAACATCGCGCCCACCGCGC ACAAGCTGGGGGGCAAGGATCTGCCGCACGGGCCCCTCAGCACGTACGTG GAGGCGCAGGTGAAGAAGCGCCTGGAGACGGCGTACGAGGCCGAGGCGGC CGAGAAGGGCATCCCGGTTTACCAGGTG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7481:4076..5253+

>mRNA_H-canaliculatus_M_contigs7481.2.1 ID=mRNA_H-canaliculatus_M_contigs7481.2.1|Name=mRNA_H-canaliculatus_M_contigs7481.2.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=300bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7481:4076..5253+ (Hapterophycus canaliculatus Oshoro7m male)
CGCCTCCTGCAGGAGCCGTGGGTCGAGTGCGACTCGTGCAAGCGCTGGGT
CCACCAGATTTGCGCGCTGTTCAACAGCCGCAAGAACTCGCACGAGCACG
CGAGCTACTACTGCCCGCACTGCGTCCTCAAGAACCGAAAGCAAAGGTCC
GGCAACATCGCGCCCACCGCGCACAAGCTGGGGGGCAAGGATCTGCCGCA
CGGGCCCCTCAGCACGTACGTGGAGGCGCAGGTGAAGAAGCGCCTGGAGA
CGGCGTACGAGGCCGAGGCGGCCGAGAAGGGCATCCCGGTTTACCAGGTG
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