mRNA_H-canaliculatus_M_contigs7481.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT9_ECTSI) HSP 1 Score: 486 bits (1251), Expect = 2.440e-159 Identity = 234/246 (95.12%), Postives = 240/246 (97.56%), Query Frame = 1
Query: 61 ARVAPGKMLSPEDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKKNDEQAE 798
AR PGKMLSPEDCTSLIEAFTE+QILNHVKSLDTGMH+SQERIQAAAGAVLTKLR+SQFGWVFNDPVDP+HLNLPDYFEIIT+PMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEF KDW ALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHA+GSNQWHWCS CYNDLKDGEIIALAETAVRKADLKRKKNDEQAE
Sbjct: 372 ARATPGKMLSPEDCTSLIEAFTEDQILNHVKSLDTGMHVSQERIQAAAGAVLTKLRDSQFGWVFNDPVDPVHLNLPDYFEIITHPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFNKDWALALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHATGSNQWHWCSSCYNDLKDGEIIALAETAVRKADLKRKKNDEQAE 617
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY4_9PHAE) HSP 1 Score: 498 bits (1282), Expect = 3.470e-159 Identity = 243/264 (92.05%), Postives = 251/264 (95.08%), Query Frame = 1
Query: 19 QMVVTGTPGIQQPDARVAPGKMLSPEDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFE----IITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKKNDEQAE 798
QMVVTGTPGIQQPDAR PGKMLSPEDCTSLIEAFTEEQILNHVKSLDTGMH+SQERIQAAAGAVLTKLR S FGWVFNDPVDP++LNLPDYFE IIT+PMDLGTVARKLAKEGAGGYLEHEEFAADV+LVFDNAMKYNGPESEVYPVA+RMKKEF KDW ALKR+EAEEN RKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHA+GSNQWHWCS CYNDLKDGEIIALAETAVRKADLKRKKNDEQAE
Sbjct: 1266 QMVVTGTPGIQQPDARATPGKMLSPEDCTSLIEAFTEEQILNHVKSLDTGMHVSQERIQAAAGAVLTKLRNSTFGWVFNDPVDPVYLNLPDYFEASRRIITHPMDLGTVARKLAKEGAGGYLEHEEFAADVRLVFDNAMKYNGPESEVYPVADRMKKEFNKDWAAALKRLEAEENARKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHATGSNQWHWCSSCYNDLKDGEIIALAETAVRKADLKRKKNDEQAE 1529
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z166_9STRA) HSP 1 Score: 225 bits (573), Expect = 2.020e-63 Identity = 109/233 (46.78%), Postives = 151/233 (64.81%), Query Frame = 1
Query: 91 PEDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKKNDE 789
P++ +LI F+ EQI H+ SL+ G+ L +++A+ VL L+ Q GWVFN PVDP+ L LPDYFE+I PMDLGT+ +KL G Y ++F VQ+ FDNAM YN S VY +A MK +FI+D+ +K++ AEE+ ++ GE C+LCG FEP +YCNG C KRI R Y+Y G+NQ+HWC C+ DLKDG+++ LA+ ++RK L +KKNDE
Sbjct: 622 PQEDHTLINCFSVEQIETHIASLNKGLQLPPAKLKASCLDVLKNLQSHQHGWVFNSPVDPVELGLPDYFEVIKQPMDLGTIRKKLEN---GCYHSLDDFHNHVQITFDNAMLYNPEGSVVYNMANEMKTKFIQDFENLMKQLNAEEDAKRRNGEACSLCGCEKLLFEPPVFYCNGHNCPSKRIRRNSYYY-VGGNNQYHWCHQCFGDLKDGQLLELADASIRKEQLIKKKNDE 850
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8EDF0_9STRA) HSP 1 Score: 222 bits (565), Expect = 2.210e-62 Identity = 111/232 (47.84%), Postives = 152/232 (65.52%), Query Frame = 1
Query: 94 EDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKKNDE 789
E TSL+ +FT QI H++SL TG +S +I+ +L KL E + W+F PVDPI LNLPDYFEII NPMDLG++ ++L A GY +F+AD++L FDNA+ YNG ES+V VA+ MK F + + + + ++AEE RK G+ C LCG FEP +YYCNG+ CNG+RI R Y+Y G NQ+HWC CYN+LK+ E + +T + K +L++KKNDE
Sbjct: 384 EQNTSLLNSFTPAQIQAHLQSLKTGFRMSTSKIRHKCSPLLKKLTEHENSWIFMQPVDPIELNLPDYFEIIKNPMDLGSIKKRLE---ANGYKTISQFSADIKLTFDNAILYNGDESDVSKVAKEMKSMFERLYEELIASIDAEEEQRKSSGDVCILCGCEKLLFEPTSYYCNGS-CNGQRIRRNSYYY-TGGRNQYHWCQPCYNELKENEPLEFPDTTLWKKELQKKKNDE 610
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8EE49_9STRA) HSP 1 Score: 211 bits (538), Expect = 8.040e-61 Identity = 108/229 (47.16%), Postives = 146/229 (63.76%), Query Frame = 1
Query: 94 EDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKK 780
E TSL+ +FT QI H++SL TG +S +I+ +L KL E + W+F PVDPI LNLPDYFEII NPMDLG++ ++L A Y +F+AD +L FDNA+ YNG ES+V VA+ MK F + + + ++AEE RK G+ C LCG FEP +YYCNG+ CNG+RI R Y+Y G NQ+HWC CYNDLK+ E + +T + K +L++KK
Sbjct: 392 EQNTSLLNSFTPAQIQAHLQSLKTGYRMSTSKIRHKCSPLLKKLTEHENSWIFMQPVDPIELNLPDYFEIIKNPMDLGSIKKRLE---ANNYKTISQFSADTKLTFDNAIIYNGDESDVSKVAKEMKSMFERLYEAMIASIDAEEEQRKSSGDVCILCGCEKLLFEPTSYYCNGS-CNGQRIRRNSYYY-MGGRNQYHWCQPCYNDLKENEPLEFPDTTLWKKELQKKK 615
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3SN67_9STRA) HSP 1 Score: 215 bits (548), Expect = 3.780e-60 Identity = 104/233 (44.64%), Postives = 148/233 (63.52%), Query Frame = 1
Query: 91 PEDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKKNDE 789
P++ +LI FT EQI H+KSL+ G+ L+ ++++ G VL L+ GWVFN PVDP+ LNLPDYFE+I PMDLGTV +KL G Y +E D+ L FDNAM YN S V +A+ +K F ++W + ++ AEE +++ G+ C+LCG FEP +YCNG C KRI R YF+ G+NQ+HWC CY+DLK+ + I +A+ ++K+ L +KKN+E
Sbjct: 252 PQEDHTLINCFTLEQIETHIKSLNQGLQLAIPKLKSKCGEVLKVLQSHAHGWVFNSPVDPVELNLPDYFEVIEKPMDLGTVKKKLDN---GVYRNLKEVEGDINLTFDNAMLYNPDGSVVSNMAKELKDRFTQEWSVLMTQLHAEEEEKRKNGDACSLCGCEKLLFEPPVFYCNGLSCRSKRIRRNSYFF-VGGNNQYHWCQPCYDDLKEHKPIQMADITLKKSSLDKKKNNE 480
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JQN1_FISSO) HSP 1 Score: 213 bits (543), Expect = 2.080e-59 Identity = 114/262 (43.51%), Postives = 160/262 (61.07%), Query Frame = 1
Query: 13 ASQMVVTGTPGIQQPDARVAPGKMLSP---EDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKKNDE 789
+S+ VV TPG+ + +V K P ED T LI F+ EQI H++SL+ G+ L +++A VL L+ Q WVFN PVDP+ L LPDYFE+I PMDLGT+ +KL G Y + EEF V L FDNAM YN S VY +A+ M+++F++D+ + ++ + EE+ +++ GE C LCG FEP +YCNG C KRI R ++Y +G+NQ+HWC CY +L+D I L + V+K L +KKNDE
Sbjct: 458 SSRPVVAATPGLAFSNGQVITPKYSGPKPQEDHT-LINCFSVEQIECHIESLNNGLQLPPVKLKAKCLDVLRLLQSHQHAWVFNTPVDPVELGLPDYFEVIKKPMDLGTIRKKLEN---GVYQKIEEFEEHVLLTFDNAMLYNPEGSVVYNMAKEMREKFVRDYAKLIEVLNEEEDVKRKNGEACLLCGCEKLLFEPPVFYCNGMNCPSKRIRRNSHYY-VAGNNQYHWCHQCYQELRDNSTIDLGDIQVKKESLTKKKNDE 714
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Z8_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.820e-59 Identity = 104/235 (44.26%), Postives = 148/235 (62.98%), Query Frame = 1
Query: 85 LSPEDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALAETAVRKADLKRKKNDE 789
+ P++ +LI FT +QI H+ SL+ G+ L +++ VL L+ Q WVFN PVDP+ L LPDYF++I PMDLGT+ ++L G Y E+F D L FDNAM YN S VY +AE MK +F+ D+ Q LK+++AEE+ +++ G+ C LCG FEP +YCNG C KRI R Y++ G NQ+HWC CY DLK+ + I +A+ +++K+ L +KKNDE
Sbjct: 409 IKPQEDHTLINCFTVKQIETHIASLNRGLQLPPPKLKIKCLEVLKVLQGHQHSWVFNSPVDPVELGLPDYFQVIKRPMDLGTIKKRLEN---GCYHLLEDFEGDAHLTFDNAMLYNPEGSVVYNMAEEMKAQFVLDYEQLLKQLKAEEDEKRKNGDACALCGSEKLLFEPPVFYCNGLNCPSKRIRRNSYYF-VGGKNQYHWCHQCYGDLKENQEIHMADLSLKKSQLTKKKNDE 639
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9Z8T9_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.840e-59 Identity = 107/234 (45.73%), Postives = 149/234 (63.68%), Query Frame = 1
Query: 91 PEDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALA-ETAVRKADLKRKKNDE 789
P++ +LI F+ EQI H+ SL+ G+ L +++A+ VL L+ Q GWVFN PVDPI L LPDYFE+I PMDLGT+ +KL G Y ++F V + FDNAM YN S VY +A MK +FI+D+ +K++ AEE+ ++ GE C+LCG FEP +YCNG C KRI R Y+Y G+NQ+HWC C+ DLK+G++I L + +++K L +KKNDE
Sbjct: 406 PQEDHTLINCFSVEQIETHIASLNKGLQLPPAKLKASCLEVLKVLQGHQHGWVFNSPVDPIELGLPDYFEVIKQPMDLGTIRKKLEN---GCYHSLDDFHNHVHITFDNAMLYNPEGSVVYNMANEMKTKFIQDFENLMKQLNAEEDSKRRNGEACSLCGCEKLLFEPPVFYCNGLSCPAKRIRRNSYYY-VGGNNQYHWCHICFADLKEGQLIELVGDVSIKKEQLIKKKNDE 635
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AKT6_9STRA) HSP 1 Score: 213 bits (542), Expect = 2.840e-59 Identity = 107/234 (45.73%), Postives = 149/234 (63.68%), Query Frame = 1
Query: 91 PEDCTSLIEAFTEEQILNHVKSLDTGMHLSQERIQAAAGAVLTKLRESQFGWVFNDPVDPIHLNLPDYFEIITNPMDLGTVARKLAKEGAGGYLEHEEFAADVQLVFDNAMKYNGPESEVYPVAERMKKEFIKDWGQALKRMEAEENGRKERGETCNLCGYSAKTFEPMTYYCNGAQCNGKRIGRGRYFYHASGSNQWHWCSGCYNDLKDGEIIALA-ETAVRKADLKRKKNDE 789
P++ +LI F+ EQI H+ SL+ G+ L +++A+ VL L+ Q GWVFN PVDPI L LPDYFE+I PMDLGT+ +KL G Y ++F V + FDNAM YN S VY +A MK +FI+D+ +K++ AEE+ ++ GE C+LCG FEP +YCNG C KRI R Y+Y G+NQ+HWC C+ DLK+G++I L + +++K L +KKNDE
Sbjct: 433 PQEDHTLINCFSVEQIETHIASLNKGLQLPPAKLKASCLEVLKVLQGHQHGWVFNSPVDPIELGLPDYFEVIKQPMDLGTIRKKLEN---GCYHSLDDFHNHVHITFDNAMLYNPEGSVVYNMANEMKTKFIQDFENLMKQLNAEEDSKRRNGEACSLCGCEKLLFEPPVFYCNGLSCPAKRIRRNSYYY-VGGNNQYHWCHICFADLKEGQLIELVGDVSIKKEQLIKKKNDE 662 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7481.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7481.1.1 >prot_H-canaliculatus_M_contigs7481.1.1 ID=prot_H-canaliculatus_M_contigs7481.1.1|Name=mRNA_H-canaliculatus_M_contigs7481.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=260bp MVVTGTPGIQQPDARVAPGKMLSPEDCTSLIEAFTEEQILNHVKSLDTGMback to top mRNA from alignment at H-canaliculatus_M_contigs7481:487..3627+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7481.1.1 ID=mRNA_H-canaliculatus_M_contigs7481.1.1|Name=mRNA_H-canaliculatus_M_contigs7481.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3141bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7481:487..3627+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7481:487..3627+ >mRNA_H-canaliculatus_M_contigs7481.1.1 ID=mRNA_H-canaliculatus_M_contigs7481.1.1|Name=mRNA_H-canaliculatus_M_contigs7481.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=780bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7481:487..3627+ (Hapterophycus canaliculatus Oshoro7m male)back to top |