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Homology
BLAST of mRNA_H-canaliculatus_M_contigs7480.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G657_ECTSI) HSP 1 Score: 273 bits (699), Expect = 1.140e-89 Identity = 170/222 (76.58%), Postives = 185/222 (83.33%), Query Frame = 1
Query: 1 MGKKGAGTGVNTKVQAAREKKAIAEESKAAKSRAAEEAAEAREWSKGANQRGSKREDEAAXXXXXXXXXLAVKKALQAEEAEQLSGFKSVVKTKKKVEVPPWEAALMSSSTSNKEKKRQEAAKRQAEAEEARKAKAERAAREAKAMRDSGIEMGDDSELMGSANPNRK--DGGEDGGDWASGIDAAIGSLSLEGGSGGPAEKHPEKRMKAVRSVESDRDVAA 660
MGKKGAGTGVNTKVQAAREK+A E ++AAK+ +EWSKGANQRGSKREDEAA LA KKALQAEEAEQLSGFKSVVKTKKKV+VPPWEAALMSSS SNKEKKRQEAAKRQA+AEEARKAKAERA +EAKAMRDSGI+MGDDSEL GSANPNRK DGG DGGDWASGIDAAIGSLSLEG GPAE+HPEKR+KA + +R++ A
Sbjct: 1 MGKKGAGTGVNTKVQAAREKQAAVEGARAAKAXXXXXXXXXKEWSKGANQRGSKREDEAARKQEEKTSKLAAKKALQAEEAEQLSGFKSVVKTKKKVDVPPWEAALMSSSVSNKEKKRQEAAKRQAQAEEARKAKAERAEKEAKAMRDSGIQMGDDSELSGSANPNRKGADGG-DGGDWASGIDAAIGSLSLEGA--GPAERHPEKRLKAALAAYEERELPA 219
BLAST of mRNA_H-canaliculatus_M_contigs7480.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L325_9PHAE) HSP 1 Score: 255 bits (652), Expect = 4.030e-83 Identity = 162/210 (77.14%), Postives = 175/210 (83.33%), Query Frame = 1
Query: 1 MGKKGAGTGVNTKVQAAREKKAIAEESKAAKSRAAEEAAEAREWSKGANQRGSKREDEAAXXXXXXXXXLAVKKALQAEEAEQLSGFKSVVKTKKKVEVPPWEAALMSSSTSNKEKKRQEAAKRQAEAEEARKAKAERAAREAKAMRDSGIEMGDDSELMGSANPNRK--DGGEDGGDWASGIDAAIGSLSLEGGSGGPAEKHPEKRMKA 624
MGKKGAGTGVNTKVQAAREK+A E ++AAK+ A+EWSKGANQRGSKREDEAA +A KKALQAEEAEQLSGFKSVV V+VPPWEAALMSSS SNKEKKRQEAAKRQA+AEEARKAKAERA +EAKAMRDSGI+MGDDS+L GSANPNRK DGG DGGDWASGIDAAIGSLSLEG GPAE+HPEKR+KA
Sbjct: 1 MGKKGAGTGVNTKVQAAREKQAAVEGARAAKAXXXXXXXXAKEWSKGANQRGSKREDEAARKQEEKASKIAAKKALQAEEAEQLSGFKSVV-----VDVPPWEAALMSSSVSNKEKKRQEAAKRQAQAEEARKAKAERAEKEAKAMRDSGIQMGDDSDLSGSANPNRKGADGG-DGGDWASGIDAAIGSLSLEGA--GPAERHPEKRLKA 202
BLAST of mRNA_H-canaliculatus_M_contigs7480.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CES5_PYTIN) HSP 1 Score: 59.7 bits (143), Expect = 3.810e-7 Identity = 61/112 (54.46%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 4 GKKGAGTGVNTKVQAAREKKAIAEESKAAKSRAAEEAAEAREWSKGANQRGSKREDEAAXXXXXXXXXLAVKKALQAEEAEQLSGF-------KSVVKTKKKVEVPPWEAAL 318
GKKG GVN+KV+AA KKA A+ K K+RAA EAAEA EWSKGA+ RGSKR +E XXXXXXXXX K +QA E +S KS K KK++ PWE AL
Sbjct: 3 GKKG---GVNSKVEAANAKKAAAQAVKDGKARAAAEAAEAAEWSKGADARGSKRREEXXXXXXXXXXXXXELKRIQALEEHAMSKVEDKNAIRKSKTKDKKELN-KPWEEAL 110
BLAST of mRNA_H-canaliculatus_M_contigs7480.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CH49_PYTIN) HSP 1 Score: 53.1 bits (126), Expect = 8.990e-5 Identity = 37/57 (64.91%), Postives = 43/57 (75.44%), Query Frame = 1
Query: 4 GKKGAGTGVNTKVQAAREKKAIAEESKAAKSRAAEEAAEAREWSKGANQRGSKREDE 174
GKKG GVN+KV+AA KKA A+ K K+RAA EAAEA EWSKGA+ RGSKR +E
Sbjct: 3 GKKG---GVNSKVEAANAKKAAAQAVKDGKARAAAEAAEAAEWSKGADARGSKRREE 56
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7480.1.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
|---|
| Uncharacterized | 1.140e-89 | 76.58 | protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... | [more] |
| Uncharacterized | 4.030e-83 | 77.14 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Uncharacterized | 3.810e-7 | 54.46 | protein n=1 Tax=Pythium insidiosum TaxID=114742 Re... | [more] |
| Uncharacterized | 8.990e-5 | 64.91 | protein n=1 Tax=Pythium insidiosum TaxID=114742 Re... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 2880.D7G657 |
| Preferred name | CCDC124 |
| PFAMs | Ccdc124 |
| Model size | 660 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K02357 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0003674,GO:0003712,GO:0003713,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010556,GO:0010557,GO:0010604,GO:0016020,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0033554,GO:0034599,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0060255,GO:0065007,GO:0065008,GO:0070887,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097659,GO:0098771,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2001141 |
| Exons | 3 |
| Evalue | 1.87e-90 |
| EggNOG OGs | KOG3223@1|root,KOG3223@2759|Eukaryota |
| Ec32 ortholog description | Protein of unknown function DUF1014 |
| Ec32 ortholog | Ec-11_005260.1 |
| Description | cell division |
| Cds size | 660 |
| COG category | CH |
| BRITE | ko00000,ko03012,ko03029 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696854085.4056277-CDS-H-canaliculatus_M_contigs7480:11..272 | 1696854085.4056277-CDS-H-canaliculatus_M_contigs7480:11..272 | Hapterophycus canaliculatus Oshoro7m male | CDS | H-canaliculatus_M_contigs7480 12..272 - |
| 1696854085.4249644-CDS-H-canaliculatus_M_contigs7480:1284..1410 | 1696854085.4249644-CDS-H-canaliculatus_M_contigs7480:1284..1410 | Hapterophycus canaliculatus Oshoro7m male | CDS | H-canaliculatus_M_contigs7480 1285..1410 - |
| 1696854085.4378552-CDS-H-canaliculatus_M_contigs7480:2738..3011 | 1696854085.4378552-CDS-H-canaliculatus_M_contigs7480:2738..3011 | Hapterophycus canaliculatus Oshoro7m male | CDS | H-canaliculatus_M_contigs7480 2739..3011 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7480.1.1 >prot_H-canaliculatus_M_contigs7480.1.1 ID=prot_H-canaliculatus_M_contigs7480.1.1|Name=mRNA_H-canaliculatus_M_contigs7480.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=220bp
MGKKGAGTGVNTKVQAAREKKAIAEESKAAKSRAAEEAAEAREWSKGANQ
RGSKREDEAAKKQEEKAAKLAVKKALQAEEAEQLSGFKSVVKTKKKVEVP
PWEAALMSSSTSNKEKKRQEAAKRQAEAEEARKAKAERAAREAKAMRDSG
IEMGDDSELMGSANPNRKDGGEDGGDWASGIDAAIGSLSLEGGSGGPAEK
HPEKRMKAVRSVESDRDVAA back to topmRNA from alignment at H-canaliculatus_M_contigs7480:12..3011- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_M_contigs7480.1.1 ID=mRNA_H-canaliculatus_M_contigs7480.1.1|Name=mRNA_H-canaliculatus_M_contigs7480.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=3000bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7480:12..3011- (Hapterophycus canaliculatus Oshoro7m male)
ATGGGTAAGAAAGGTGCGGGCACGGGTGTGAACACGAAGGTGCAGGCTGC
GCGGGAGAAAAAGGCTATCGCCGAGGAAAGCAAAGCTGCCAAGTCTCGAG
CCGCGGAAGAAGCTGCCGAGGCACGCGAGTGGAGCAAGGGCGCGAACCAA
AGGGGCTCGAAGCGGGAGGACGAAGCCGCCAAGAAGCAAGAAGAGAAGGC
TGCCAAGCTGGCCGTGAAAAAGGCGCTGCAGGCGGAGGAGGCGGAGCAGC
TCTCCGGCTTCAAGTCGGTCGTGGTGAGTTGTACACCAAGGCGCGGCGGG
ATGAAGGACAGAGCATTCTTCAGGAGCAGCATCGGGTCCAAGAGACAGAG
GGAGAGACACTCGTAGTGCAAGAGTTGCAGCCGCACACCGTTGCTGAGCG
TTACCGGTAGTACGAATCGTGGCGTGGAGAAGACGTCTGCGCCCCGCTGC
ACCTACACATACTACGAAGAACGGAGTAATGTTTTATGTCTGAGACCGGC
CTCCACCACGGTGGGCGTGCACGGCCGGTTTCCACGTAAGCGGCGGGCAC
TCCCGTGCACACCAACACGAAGATACCCTTGCTCCCCTCAAGGACACCTG
GATTTCCATTGCCGACGCTATGGCAAAGCGTGGGCAGCGGCTGGCACCGC
TGGTGTGCACTGTGCCTCGGAGTTTTGCCACCTTACGCATCCCGCCAAGC
TACGACGCCCGCCGAGATTTTTCTCGTCCAACACTCCCGAATATCTTGCT
GCTCACACCCTTCCTGCTGTACACATGTGCGGTGTGATTGAGGGTTCTGG
GTACCGTTCCGTGGGGACTCCTGCATCTAGAAGGAGCAGACTCTGGCGGG
CCTCATCACAGTCGCGTTTCTTGACCTGGTGTTACTCGCGGCGTCTCCGG
TGGGGAATCAATCGCGCATGCAGGACGCGGATCCATCCCTCCCCGTTGCG
TGCGACTTGTCGGCCACGCCTCGGCCGCGCGACGGGCGCGTGGTCTACCC
CGCGGCACCCTGCCGCGGGCCGTCCTGCCTTTCGCTCCAGAGCCACCATC
CGTAGCTATCTTTAGAGGTATCATATCTTCAGGCAGTTTGTCGGTCTTGC
GTCCAACAGAGGGGAGCGAGTGCAGTTTCACGCCTGTGGTTCAGATGCGC
ACCACGCCCACAGCTTCGAGCGGCGCACGTCGATGGGTTGGATGGATCCT
CGACCCTCTTTTCCTTTCTCTCCGTGTTCGTGACCCGCAAGCTCCGCGCT
TCCGCCCTGAAGTCACGGGTTTTCCGAACCCCGCGCCGGGAGGGCTATGA
TCGAGAAGGGAGGAAGGACTCTATGGGACGAGCAACGGAGAGCCTCGTGT
TCGTGGCCGAGCATGGGGCGAAAGAAGCATGCTCGTGCTTCCTTTGAGCG
CGCGCGAGCGCCGGGCTTACCAGGAACGCCCCGTGCCCCTCGGTCTCGGT
CTCTGCTGCGCAGGACGACTGCCGACGGCTGAGTTGATTCCCGTGCAGCG
TCCCAACGCGCAACGCGGGCAGCAGCAGTGGTTGATCTGTTTCCCTTCCT
TGCCCGTCTCGCCCGGCTTGAATCCCGCCGCTTCGCCGTTGCTCGCCGCA
GAAAACGAAGAAGAAGGTGGAAGTGCCGCCGTGGGAGGCGGCTCTGATGT
CCTCCTCCACGAGCAACAAAGAGAAGAAGAGGCAGGAGGCGGCCAAACGG
CAGGCGGAGGCGGAGGAAGCCCGCAAGGTGGGTGCGCTCTCGTGCGTGGG
ATCGAAAAGGAGAAAGGAGAAAGGGGTCGAGGAGGGAAGAGGAGTAGATA
CCAGCGCTGTTTCATCGTGTGCGTGTGGTGCGCCGTGACGAGAGGTGGTG
TGGTTGGACGAAGGGCAGGATGAGCAGATGCATGGTGCGTGCGGTCCGCT
GGGTTTGCTCGGCAGGCGCGAGGGATGGACGAGGACGCAGGAACGTTCCT
TCGTCGCCTCTTACTAGAAGCGGCGAAATCTCTACGCATGCACGAGTTCC
CATCCGGAAACGCTGTTCCCTTGCTGGAGAGGTTTCCATAAACAGAGGAA
AGAAACCACTATTAATAGTGGCGCACCTGACGACGAAAGGGACTACGCTG
TGTGATACCCCGAGAAGGTTGCACGAGGAAGGCTTGAGTAAGAAGACTAT
GGTCGAGGAGAACGGGAGGGCAATAAACAGACGCGGGTGTTCTCCTTCGG
TGCCTGTGCGGGTAAGGCATGCCTCTGTTGCTTCTTCCGCACCATGATCA
TCGATCAATCCTGGAATCATCGGTCCGATCAGACGCTTGTGGTGGAGACT
GAGCTACCCGTCAGGACCGGTATGATGATGTGGGCGATGTAGATATGACA
TACCGTGGGATTTGGATTAGACTCGCTCAATCGGCGAGGAGAGGAGATGA
ACCTTTCGCCACCTGCCGCTCCCGGCGCAAGAAAAGCGGTGCTGAGCAGC
CAATGTAGAAGGTTTAGGTGGCCGGAGTGAATGCTTGGCATCATCGGCGA
AGCAACGCGATGGGTTAAGCCCCCCCTCCCCCACCCTGCATCCCCCCTCC
TCTCCTTTTCTCAGCCGGCATGTACCTTACCGCACGTGTACAGTAGTCAG
CGCGCTACCTAAAGGAAGACGTCTTGTTTTGCGAGCCCAAGACCGAAAGC
TAGCAAAGACACGACAGCGGTAGCTACAACACGTACCAACCCAACCCAAC
CCAGTAAAGCGCGCCGCCCTGTGTTACTCGACGTTTTAGGCGAAGGCCGA
GCGCGCCGCCAGGGAGGCCAAGGCCATGCGAGACTCGGGCATCGAGATGG
GTGACGACTCCGAGCTGATGGGCAGCGCGAACCCCAACAGAAAAGACGGC
GGGGAAGACGGCGGGGACTGGGCCAGCGGCATCGACGCCGCCATCGGAAG
CCTGAGCCTCGAGGGCGGGAGCGGCGGGCCGGCGGAGAAGCACCCCGAGA
AGCGGATGAAGGCGGTGCGTTCGGTGGAAAGTGATCGTGATGTAGCCGCA
back to topCoding sequence (CDS) from alignment at H-canaliculatus_M_contigs7480:12..3011- >mRNA_H-canaliculatus_M_contigs7480.1.1 ID=mRNA_H-canaliculatus_M_contigs7480.1.1|Name=mRNA_H-canaliculatus_M_contigs7480.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=660bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7480:12..3011- (Hapterophycus canaliculatus Oshoro7m male)
ATGGGTAAGAAAGGTGCGGGCACGGGTGTGAACACGAAGGTGCAGGCTGC
GCGGGAGAAAAAGGCTATCGCCGAGGAAAGCAAAGCTGCCAAGTCTCGAG
CCGCGGAAGAAGCTGCCGAGGCACGCGAGTGGAGCAAGGGCGCGAACCAA
AGGGGCTCGAAGCGGGAGGACGAAGCCGCCAAGAAGCAAGAAGAGAAGGC
TGCCAAGCTGGCCGTGAAAAAGGCGCTGCAGGCGGAGGAGGCGGAGCAGC
TCTCCGGCTTCAAGTCGGTCGTGAAAACGAAGAAGAAGGTGGAAGTGCCG
CCGTGGGAGGCGGCTCTGATGTCCTCCTCCACGAGCAACAAAGAGAAGAA
GAGGCAGGAGGCGGCCAAACGGCAGGCGGAGGCGGAGGAAGCCCGCAAGG
CGAAGGCCGAGCGCGCCGCCAGGGAGGCCAAGGCCATGCGAGACTCGGGC
ATCGAGATGGGTGACGACTCCGAGCTGATGGGCAGCGCGAACCCCAACAG
AAAAGACGGCGGGGAAGACGGCGGGGACTGGGCCAGCGGCATCGACGCCG
CCATCGGAAGCCTGAGCCTCGAGGGCGGGAGCGGCGGGCCGGCGGAGAAG
CACCCCGAGAAGCGGATGAAGGCGGTGCGTTCGGTGGAAAGTGATCGTGA
TGTAGCCGCA back to top
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