mRNA_H-canaliculatus_M_contigs74780.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs74780.1.1
Unique NamemRNA_H-canaliculatus_M_contigs74780.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Non-specific (serine/threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYJ6_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 2.990e-28
Identity = 55/62 (88.71%), Postives = 59/62 (95.16%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            QDLFNAAFLTVWDEL+MENWEG+  H+PVIEAIQSALSSPSLP EIQ+QLLNLAGFMELQDK
Sbjct:  127 QDLFNAAFLTVWDELFMENWEGDNTHSPVIEAIQSALSSPSLPPEIQTQLLNLAGFMELQDK 188
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K683_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 5.530e-28
Identity = 54/62 (87.10%), Postives = 59/62 (95.16%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            QDLFNAAFLTVWDEL++ENWEG+  H+PVIEAIQSALSSPSLP EIQ+QLLNLAGFMELQDK
Sbjct:  544 QDLFNAAFLTVWDELFVENWEGDNAHSPVIEAIQSALSSPSLPPEIQTQLLNLAGFMELQDK 605
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Serine/threonine-protein (kinase TOR n=4 Tax=Microbotryum TaxID=34416 RepID=A0A2X0MMZ4_9BASI)

HSP 1 Score: 65.1 bits (157), Expect = 1.180e-10
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            +DLFNA F++VW ELY +N++ ++     + AIQ+A SSP+LP EI  QLLNLA FME  DK
Sbjct: 1282 RDLFNAGFVSVWGELY-DNYQEDL-----VRAIQNAFSSPTLPPEITQQLLNLAEFMEHDDK 1337
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Serine/threonine-protein (kinase TOR n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7DS05_MIXOS)

HSP 1 Score: 61.2 bits (147), Expect = 2.680e-9
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            +DLFNA+F++ W ELY + ++ E+     + AI+SALSSP++P EI   LLNLA FME  DK
Sbjct: 1177 RDLFNASFVSCWTELY-DQYQDEL-----VRAIESALSSPTVPPEIMQTLLNLAEFMEHDDK 1232
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Serine/threonine-protein (kinase TOR (Fragment) n=1 Tax=Sporidiobolus salmonicolor TaxID=5005 RepID=A0A0D6EK51_SPOSA)

HSP 1 Score: 59.7 bits (143), Expect = 9.320e-9
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            +DLFNAAF++ W ELY + ++ E+     + AI +AL+SP+LP EI   LLNLA FME  DK
Sbjct: 1320 RDLFNAAFVSCWTELY-DQYQEEL-----VRAISTALASPTLPPEITQTLLNLAEFMEHDDK 1375
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: DUF3385 (domain-containing protein (Fragment) n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5Y6Q2_9DELT)

HSP 1 Score: 59.7 bits (143), Expect = 9.350e-9
Identity = 25/62 (40.32%), Postives = 42/62 (67.74%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            ++LFN++F ++W+ELY    +  + + P+I  I++AL S  +P  I   LLNLA FM++QD+
Sbjct: 1328 EELFNSSFHSIWEELYASQVQDVVQNIPLITGIETALESNQIPKNIMISLLNLAEFMDMQDR 1389
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Serine/threonine-protein (kinase TOR n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2G3P1_9BASI)

HSP 1 Score: 59.7 bits (143), Expect = 9.350e-9
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            +DLFNAAF++ W ELY + ++ E+     + AI +AL++PSLP EI   LLNLA FME  DK
Sbjct: 1192 RDLFNAAFVSCWTELY-DQYQEEL-----VRAISTALAAPSLPPEITQTLLNLAEFMEHDDK 1247
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Serine/threonine-protein (kinase TOR (Fragment) n=2 Tax=Rhodotorula TaxID=5533 RepID=A0A194S413_RHOGW)

HSP 1 Score: 59.7 bits (143), Expect = 9.350e-9
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            +DLFNAAF++ W ELY + ++ E+     + AI +AL+SP+LP EI   LLNLA FME  DK
Sbjct: 1172 RDLFNAAFVSCWTELY-DQYQEEL-----VRAISTALASPTLPPEITQTLLNLAEFMEHDDK 1227
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: Serine/threonine-protein (kinase TOR n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4S1X9_MELLP)

HSP 1 Score: 59.7 bits (143), Expect = 9.350e-9
Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            ++LFNAAF++ W ELY +  E       ++ AIQ+ALSSP++P EI   LLNLA FME  +K
Sbjct: 1217 RELFNAAFVSCWTELYSQYQE------ELVNAIQTALSSPTIPPEITQTLLNLAEFMEHDEK 1272
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BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Match: DNA-directed (RNA polymerase n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UH62_CAPO3)

HSP 1 Score: 59.7 bits (143), Expect = 9.380e-9
Identity = 31/62 (50.00%), Postives = 44/62 (70.97%), Query Frame = 1 
Query:   22 QDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLPSEIQSQLLNLAGFMELQDK 207
            ++LFNAAF++ W ELY E ++ E+     ++A+++AL SP +P EIQ  LLNLA FME  DK
Sbjct: 2644 RELFNAAFVSCWTELY-EQYQEEL-----VQALETALLSPHIPPEIQQTLLNLAEFMEHDDK 2699
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74780.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Non-specific2.990e-2888.71serine/threonine protein kinase n=1 Tax=Ectocarpus... [more]
Uncharacterized5.530e-2887.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Serine/threonine-protein1.180e-1054.84kinase TOR n=4 Tax=Microbotryum TaxID=34416 RepID=... [more]
Serine/threonine-protein2.680e-951.61kinase TOR n=1 Tax=Mixia osmundae (strain CBS 9802... [more]
Serine/threonine-protein9.320e-951.61kinase TOR (Fragment) n=1 Tax=Sporidiobolus salmon... [more]
DUF33859.350e-940.32domain-containing protein (Fragment) n=1 Tax=Myxoc... [more]
Serine/threonine-protein9.350e-951.61kinase TOR n=1 Tax=Leucosporidium creatinivorum Ta... [more]
Serine/threonine-protein9.350e-951.61kinase TOR (Fragment) n=2 Tax=Rhodotorula TaxID=55... [more]
Serine/threonine-protein9.350e-950.00kinase TOR n=1 Tax=Melampsora larici-populina (str... [more]
DNA-directed9.380e-950.00RNA polymerase n=2 Tax=Capsaspora owczarzaki (stra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74780contigH-canaliculatus_M_contigs74780:6..212 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FYJ6
Preferred nameTOR1
PFAMsDUF3385,FAT,FATC,FRB_dom,PI3_PI4_kinase
Model size207
Max annot lvl2759|Eukaryota
KEGG koko:K07203
KEGG Pathwayko01521,ko01522,ko04012,ko04066,ko04072,ko04136,ko04138,ko04139,ko04140,ko04150,ko04151,ko04152,ko04211,ko04212,ko04213,ko04218,ko04371,ko04630,ko04659,ko04714,ko04910,ko04919,ko04920,ko04930,ko04931,ko05165,ko05167,ko05200,ko05205,ko05206,ko05210,ko05212,ko05214,ko05215,ko05221,ko05224,ko05225,ko05226,ko05230,ko05231,map01521,map01522,map04012,map04066,map04072,map04136,map04138,map04139,map04140,map04150,map04151,map04152,map04211,map04212,map04213,map04218,map04371,map04630,map04659,map04714,map04910,map04919,map04920,map04930,map04931,map05165,map05167,map05200,map05205,map05206,map05210,map05212,map05214,map05215,map05221,map05224,map05225,map05226,map05230,map05231
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.91e-29
EggNOG OGsCOG5032@1|root,KOG0891@2759|Eukaryota
EC2.7.11.1
Descriptionprotein serine/threonine kinase activity
Cds size207
COG categoryBDLTU
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854085.061819-CDS-H-canaliculatus_M_contigs74780:5..2121696854085.061819-CDS-H-canaliculatus_M_contigs74780:5..212Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74780 6..212 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74780.1.1prot_H-canaliculatus_M_contigs74780.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs74780 6..212 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs74780.1.1

>prot_H-canaliculatus_M_contigs74780.1.1 ID=prot_H-canaliculatus_M_contigs74780.1.1|Name=mRNA_H-canaliculatus_M_contigs74780.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=69bp
MPPRSPPQDLFNAAFLTVWDELYMENWEGEIGHAPVIEAIQSALSSPSLP
SEIQSQLLNLAGFMELQDK
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mRNA from alignment at H-canaliculatus_M_contigs74780:6..212+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs74780.1.1 ID=mRNA_H-canaliculatus_M_contigs74780.1.1|Name=mRNA_H-canaliculatus_M_contigs74780.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=207bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74780:6..212+ (Hapterophycus canaliculatus Oshoro7m male)
ATGCCTCCCCGATCCCCTCCCCAGGACCTATTCAACGCGGCGTTTCTCAC
GGTGTGGGACGAGCTCTACATGGAGAACTGGGAGGGGGAGATCGGCCACG
CGCCGGTGATCGAGGCGATACAGTCGGCCCTCAGCTCCCCCTCTCTGCCC
TCGGAGATACAGAGCCAGCTGCTCAACCTCGCGGGGTTCATGGAGCTCCA
GGACAAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74780:6..212+

>mRNA_H-canaliculatus_M_contigs74780.1.1 ID=mRNA_H-canaliculatus_M_contigs74780.1.1|Name=mRNA_H-canaliculatus_M_contigs74780.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=207bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74780:6..212+ (Hapterophycus canaliculatus Oshoro7m male)
ATGCCTCCCCGATCCCCTCCCCAGGACCTATTCAACGCGGCGTTTCTCAC
GGTGTGGGACGAGCTCTACATGGAGAACTGGGAGGGGGAGATCGGCCACG
CGCCGGTGATCGAGGCGATACAGTCGGCCCTCAGCTCCCCCTCTCTGCCC
TCGGAGATACAGAGCCAGCTGCTCAACCTCGCGGGGTTCATGGAGCTCCA
GGACAAG
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