mRNA_H-canaliculatus_M_contigs7478.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7478.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7478.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs7478.1.1 vs.
Match: Tankyrase (1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T9_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 9.310e-10
Identity = 31/45 (68.89%), Postives = 34/45 (75.56%), Query Frame = 1 
Query:    1 PLHVAAASRNFGGIRLLLQFGAEVDVKDAHGCTPLYAACKAAAQR 135
            PLH AA+ RN  GIR LLQ GAEVDV+D  G TPL+AACKA A R
Sbjct:  112 PLHDAASHRNIVGIRQLLQCGAEVDVRDRRGYTPLFAACKATAFR 156
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BLAST of mRNA_H-canaliculatus_M_contigs7478.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PV87_SAPDV)

HSP 1 Score: 55.8 bits (133), Expect = 7.780e-8
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 1 
Query:    1 PLHVAAASRNFGGIRLLLQFGAEVDVKDAHGCTPLYAACK 120
            PLH+AAA+R+   +RLLLQFGA V+ +D +GCTPL+AA +
Sbjct:   72 PLHLAAAARSLASVRLLLQFGANVNARDDNGCTPLHAAAR 111
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BLAST of mRNA_H-canaliculatus_M_contigs7478.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Blastomyces percursus TaxID=1658174 RepID=A0A1J9QCQ4_9EURO)

HSP 1 Score: 47.4 bits (111), Expect = 7.180e-5
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 1 
Query:    1 PLHVAAASRNFGGIRLLLQFGAEVDVKDAHGCTPLYAACK 120
            PLHVA+ S   G +RLLL+ GAEVDV+++ G TPLY A +
Sbjct:   24 PLHVASCSGPAGLVRLLLEHGAEVDVRNSKGWTPLYCAIR 63
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7478.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Tankyrase9.310e-1068.891 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=... [more]
Uncharacterized7.780e-860.00protein n=2 Tax=Saprolegnia diclina (strain VS20) ... [more]
Uncharacterized7.180e-557.50protein n=1 Tax=Blastomyces percursus TaxID=165817... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7478contigH-canaliculatus_M_contigs7478:1857..1994 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G6T9
Preferred nameANKS6
PFAMsAnk,Ank_2,Ank_4,Leu_zip,SAM_1
Model size138
Max annot lvl2759|Eukaryota
KEGG koko:K19400,ko:K21415
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.53e-10
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
Cds size138
COG categoryI
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854085.0263875-CDS-H-canaliculatus_M_contigs7478:1856..19941696854085.0263875-CDS-H-canaliculatus_M_contigs7478:1856..1994Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7478 1857..1994 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7478.1.1prot_H-canaliculatus_M_contigs7478.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7478 1857..1994 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7478.1.1

>prot_H-canaliculatus_M_contigs7478.1.1 ID=prot_H-canaliculatus_M_contigs7478.1.1|Name=mRNA_H-canaliculatus_M_contigs7478.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=46bp
PLHVAAASRNFGGIRLLLQFGAEVDVKDAHGCTPLYAACKAAAQR*
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mRNA from alignment at H-canaliculatus_M_contigs7478:1857..1994+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7478.1.1 ID=mRNA_H-canaliculatus_M_contigs7478.1.1|Name=mRNA_H-canaliculatus_M_contigs7478.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=138bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7478:1857..1994+ (Hapterophycus canaliculatus Oshoro7m male)
CCCCTTCACGTGGCGGCGGCGAGTCGAAACTTTGGTGGTATCCGGCTGCT
GCTACAGTTCGGCGCGGAGGTGGACGTGAAAGATGCGCACGGTTGCACCC
CGCTCTATGCTGCTTGTAAAGCCGCCGCGCAAAGGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7478:1857..1994+

>mRNA_H-canaliculatus_M_contigs7478.1.1 ID=mRNA_H-canaliculatus_M_contigs7478.1.1|Name=mRNA_H-canaliculatus_M_contigs7478.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=138bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7478:1857..1994+ (Hapterophycus canaliculatus Oshoro7m male)
CCCCTTCACGTGGCGGCGGCGAGTCGAAACTTTGGTGGTATCCGGCTGCT
GCTACAGTTCGGCGCGGAGGTGGACGTGAAAGATGCGCACGGTTGCACCC
CGCTCTATGCTGCTTGTAAAGCCGCCGCGCAAAGGTAA
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