mRNA_H-canaliculatus_M_contigs7477.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U464_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 7.690e-17 Identity = 42/68 (61.76%), Postives = 57/68 (83.82%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKV 204
RWR LEGED ++QL + I +LEDRL++K+E LLEK+LVLEEV +LT+KLR QA AG+AEA+ L+K++
Sbjct: 713 RWRGLEGEDPDVEQLASKIKVLEDRLNEKREALLEKDLVLEEVSTLTEKLRSQANAGKAEAVALAKQI 780
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Aste57867_13890 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L0Y5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.540e-14 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKVTT 210
RWRALEG+D DQL A + LE+R + KKE LLEKELVLEEV +L+ KLR QA+ GR + L L+KKV T
Sbjct: 718 RWRALEGDDPDEDQLGAKLAFLEERYNMKKEQLLEKELVLEEVTNLSDKLRMQASDGRGDTLQLAKKVNT 787
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKD7_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 2.100e-14 Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKVTT 210
RWR LEG+D DQL A + LE+R + KKE LLEKELVLEEV +L+ KLR QA+ GR + L L+KKV T
Sbjct: 718 RWRPLEGDDPDEDQLAAKLAFLEERYNAKKEQLLEKELVLEEVTNLSDKLRSQASEGRGDTLQLAKKVNT 787
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H390_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.910e-14 Identity = 39/68 (57.35%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKV 204
RWRAL GED +DQLEA + +LE RL +KK ++EKELVLEE+ +LT KLR +A +GR +AL L+K++
Sbjct: 539 RWRALGGEDPELDQLEAKMSVLEARLEEKKVNIIEKELVLEEITTLTTKLRNRAHSGRDDALALTKRL 606
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: MBO2, (coiled coil flagellar protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z2P3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.930e-14 Identity = 42/70 (60.00%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKVTT 210
RWRALEG+D +QL A + LE+R + KKE LLEKELVLEEV +L+ KLR QA GR + L L+KKV T
Sbjct: 715 RWRALEGDDPDDEQLSAKLAFLEERFNVKKEQLLEKELVLEEVTNLSDKLRAQAADGRGDTLQLAKKVNT 784
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4E7_PYTOL) HSP 1 Score: 74.7 bits (182), Expect = 5.370e-14 Identity = 43/68 (63.24%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKV 204
RWRAL+G+D +QL+A I LE R KKE LLEKELVLEEV SL+ KLR QAT R E L L+KKV
Sbjct: 761 RWRALDGDDPDEEQLQAKIAFLEGRYHRKKEQLLEKELVLEEVTSLSNKLRTQATERRGETLALAKKV 828
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3VXW6_9SPIT) HSP 1 Score: 70.1 bits (170), Expect = 7.640e-14 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKV 204
+WR L GEDL L I LE+RL+DKKE+LLEKEL+LEEV +L+ KLR+QA GR + LS+KV
Sbjct: 9 KWRKLGGEDLDPQTLRVKIQDLEERLNDKKESLLEKELILEEVTALSDKLRQQAVDGRQGTMELSQKV 76
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFN2_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.070e-13 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLS 195
RWR L+G DL ++QL A I +LEDRL K+E LLEKEL+LEEV SLT KLR QA + R A +L+
Sbjct: 35 RWRPLDGADLDLEQLVAKIKVLEDRLDQKREALLEKELILEEVTSLTDKLRTQAVSKRDAAKVLA 99
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Coiled-coil (flagellar protein, move backward only 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G001_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 1.090e-13 Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 1
Query: 61 ILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKV 204
ILEDRLS KKE LLEKELVLEEV+SLTKKLRKQA+ GRA+AL LSKKV
Sbjct: 30 ILEDRLSGKKEVLLEKELVLEEVISLTKKLRKQASDGRAQALALSKKV 77
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0RMU6_9CHLO) HSP 1 Score: 73.6 bits (179), Expect = 1.320e-13 Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLRKQATAGRAEALLLSKKV 204
RWR LEG+ ++L A I LE+RL+DKKE LLEKEL+LEEV SL+ KLRKQA GR + L L++KV
Sbjct: 271 RWRLLEGKIPDKEELSARIQQLEERLNDKKEALLEKELILEEVTSLSDKLRKQAAEGRQDTLELAQKV 338 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7477.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7477.1.1 >prot_H-canaliculatus_M_contigs7477.1.1 ID=prot_H-canaliculatus_M_contigs7477.1.1|Name=mRNA_H-canaliculatus_M_contigs7477.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=72bp RWRALEGEDLSMDQLEASIMILEDRLSDKKETLLEKELVLEEVVSLTKKLback to top mRNA from alignment at H-canaliculatus_M_contigs7477:3276..4276- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7477.1.1 ID=mRNA_H-canaliculatus_M_contigs7477.1.1|Name=mRNA_H-canaliculatus_M_contigs7477.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1001bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7477:3276..4276- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7477:3276..4276- >mRNA_H-canaliculatus_M_contigs7477.1.1 ID=mRNA_H-canaliculatus_M_contigs7477.1.1|Name=mRNA_H-canaliculatus_M_contigs7477.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=216bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7477:3276..4276- (Hapterophycus canaliculatus Oshoro7m male)back to top |