mRNA_H-canaliculatus_M_contigs7472.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI) HSP 1 Score: 298 bits (763), Expect = 1.040e-98 Identity = 156/227 (68.72%), Postives = 180/227 (79.30%), Query Frame = 1
Query: 1 KKMNAGRFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGG--TAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
++MN GRFLL+VTGASRGFGRCVAEEFVRQ PANPVDL+L+ARS++ L++A++++ EIA S + P GVVVR EP+DLGDLDHLEANLE VFSRIDP RYSRAVLVNNAGS+GH+ + LPSLA RSEMDFNITSA WL+SRF+AVFGAK+ S +G D G TA A DT D SNN+VVNISSLAALQPFE+WGGYSSGKAARDMFHR
Sbjct: 4 QQMNGGRFLLLVTGASRGFGRCVAEEFVRQVAPANPVDLVLVARSETGLESATDSVNEIAASINAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPNLSSGNSVEGTLGESGADVDKNGATTAATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHR 230
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK79_PYTOL) HSP 1 Score: 127 bits (318), Expect = 6.060e-32 Identity = 79/221 (35.75%), Postives = 114/221 (51.58%), Query Frame = 1
Query: 19 RFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRT--EPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
R +V+TGASRGFGRC+A +F R+ T A VD+ L+AR + DL + E S +N ++T + +DLGD + + ++ Y R LV+NAGSIG + F ELPS A+L +FN+ S W RF V+GA + E + D + A +VNISS A++PF+++G Y +GKAAR+M HR
Sbjct: 2 RSAVVITGASRGFGRCLALDFTREIT-AGDVDMFLLARHEGDLGETVRLVTEAWASKANAAESKLQTFVKTVDLGDQVDYVTKFDAILEQLQATAYDRVYLVHNAGSIGDLCFTQELPSPAELAQYWEFNVNSVVWFNKRFLDVYGATREELLSDAPLSASYQA-------------------------FIVNISSGCAIKPFKTYGMYCTGKAAREMHHR 196
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H4_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.720e-29 Identity = 80/224 (35.71%), Postives = 123/224 (54.91%), Query Frame = 1
Query: 28 LVVTGASRGFGRCVA----EEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPD-----GVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFH 672
+V+TGASRGFGR VA E+V Q T L+L+ARS LQ + + T + + V +DL +L+ EA + ++ R +LVNNAG+IG + + E+ S+ ++++EMD N+TSA ++ + FA FGA +++ +H E+ G A GG + PQ ++N+SSLAA +PF+SWG Y +GKAAR++FH
Sbjct: 7 VVITGASRGFGRAVAVAMAREWVCQLT------LMLVARSSESLQETAAMLLRERSKTEGIEMPMDQSMAVSVAAVDLRNLEETEAWAKQAVDKLKGLAPDRIILVNNAGTIGGLGCIQEIESIKEMQTEMDLNVTSAMYITAAFARKFGAPRADRLH----AEENGHAGAAA--GGMGMPPAPPRPQ----TFIINVSSLAAREPFQSWGMYCAGKAAREIFH 214
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Sepiapterin (reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U863_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.440e-28 Identity = 89/230 (38.70%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 19 RFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDP------------GRYSRAVLVNNAGSIGHMSFVTEL-PSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMF 669
RFL+ +TGASRGFGRC+A E R+ PA VD+ LIAR+ L A I E + S + GV V T P DLG+L+ LE N +F+ +D +Y L NNAGS+G +++ +L L LR +D N+TS+ + S F F SSPS V A+ ++NISS+AA+QPF SWG Y +GKAARDMF
Sbjct: 8 RFLVFITGASRGFGRCLALEAARKWGPA--VDMHLIARNAEALTAVKRDI-EASLSDQSKIGVRVWTWPFDLGNLETLEPNFARIFATVDEFSAEQESTAMIMHKYGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSILITSLFLRRFCT--------LSSPSNK----VPAL-------------------FIINISSMAAIQPFHSWGVYCAGKAARDMF 203
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM32_9STRA) HSP 1 Score: 117 bits (292), Expect = 8.270e-28 Identity = 81/243 (33.33%), Postives = 117/243 (48.15%), Query Frame = 1
Query: 22 FLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSN--------------------------NLVVNISSLAALQPFESWGGYSSGKAARDMFH 672
+L++VTGASRG GRC+A+E VR + + L+L+ARS+S L + +I + N + V + +P+DLG+L LE +L+ FS +D Y R VL NNAGS+G ++ +L S A LR +D NITSA W+ F + + + ++VVNISSLAA++PF +W Y +GKAARDMFH
Sbjct: 6 WLVIVTGASRGLGRCLAQEAVRSIGKDHRMTLLLMARSESGLMETAASIRGM-----NSEDVTIEVQPVDLGNLSTLETSLQNAFSGLDARHYQRCVLFNNAGSLGELAPAMDL-SFAGLREAVDLNITSAMWVTCAFVNLILPRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPDVVVNISSLAAVKPFPTWAAYCAGKAARDMFH 242
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W3N7_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.030e-25 Identity = 75/235 (31.91%), Postives = 121/235 (51.49%), Query Frame = 1
Query: 19 RFLLVVTGASRGFGRCVAEEFVRQATPA---NPVDLILIARSQSDLQAASNAIGEIAG----STSNPDGVV-----VRTEPIDLGDLDHLEANLEVVF-----SRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFH 672
R +++VTGASRG GR +A FV++ +P+ ++L+ARS+ L + + + A +T+N + + IDL DLD+L+ NL + S+ + + +A+L+NNAGS+GH+ + SL +L++ +DFNITS+ W+++RF F + +VVNISSL A++PF++ G Y +GKAARDMFH
Sbjct: 40 RTVVIVTGASRGLGRAIALSFVKEEKTFQKFSPLRILLLARSEEGLVGTKSLMQQEADKFLDTTANDNDATSDLLDMTHHVIDLSDLDNLDDNLNDILDFSSSSKNNLPPFEKAILINNAGSLGHLGPCMNMTSLKELQTSLDFNITSSLWVSTRFVRSFSQQXXXXXXX--------------------------------KTVVVNISSLCAIEPFKTMGVYCTGKAARDMFH 242
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX65_PHATC) HSP 1 Score: 109 bits (273), Expect = 1.980e-25 Identity = 82/228 (35.96%), Postives = 109/228 (47.81%), Query Frame = 1
Query: 7 MNAGRFLLVVTGASRGFGRCVAEEFVRQATPA-----NPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRI--DPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMF 669
M LLV+TGASRG GR +A EF + + +LIARS S L+ AI A + + + V IDL DL+ L+ L+ VF +I D +Y R VLVNNAGS+G + E PSL+ +R +DFN+TSA W RF I D D + + +VNISSL A+QPF + YS+ KAARD +
Sbjct: 1 MPVTNLLLVITGASRGLGRAIANEFCGPSLSGYWPSLRYIRAVLIARSTSGLEETRTAIE--ANTRKSDLNIRVDLHSIDLSDLNTLDHKLDAVFQQIQNDQIKYDRVVLVNNAGSLGALGPCLESPSLSDMRQTVDFNVTSALWTTVRFGRF--------IRD-------------------------DERTNDATTTIVNISSLVAVQPFPTMAIYSAVKAARDSY 193
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF97_PYTOL) HSP 1 Score: 108 bits (270), Expect = 7.130e-25 Identity = 71/219 (32.42%), Postives = 111/219 (50.68%), Query Frame = 1
Query: 19 RFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
R ++V+TGASRG+GRC+A +F R+ + VD+ L AR ++DL + E + + V T+ +DL +E + ++ Y + LV+NAGS+G + + EL S A+L + + N+ S W RF VFGA + E + T AV P ++ ++NISSL A++PF + G Y +GKAAR+M R
Sbjct: 2 RSVVVITGASRGYGRCLALDFAREIEQGD-VDMYLWARHEADLAETKRLVHEAWQQSKG--ALDVATQVVDLSLQADYVPKIETLIVQLQSKSYEQVFLVHNAGSLGDLGYTNELSSPAQLSAYWELNVNSVVWFNKRFLDVFGATREELVAST---------------------AVSTKPATQAT--IINISSLCAIEPFATQGLYCTGKAAREMHFR 194
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Sepiapterin (reductase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBF2_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.270e-24 Identity = 71/219 (32.42%), Postives = 110/219 (50.23%), Query Frame = 1
Query: 28 LVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEI---AGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
++VTGASRGFGR +A + A + ++L A S LQ + + G + + + V +D+ DL +EA + + G+ SR +LVNNAG++G + V EL ++ +D N+TS L + F FGA +S+ AA + P+ ++ V+N+SSLAAL+PF++WG Y KAAR+MFHR
Sbjct: 25 VLVTGASRGFGRALAMQMA--ARWPQKLTIVLAASSSEGLQETATLLVNARVKTGVKNLEESMAVSVAAVDMRDLPAVEAWAQTAMDVLQAGKPSRVILVNNAGTVGDLGTVAELRDWQSVQKNLDLNVTSCMSLTAEFTRRFGAPRSDR------------------------AAAKELPRPEA--FVINVSSLAALEPFQTWGNYCVTKAAREMFHR 215
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFV0_GLOUD) HSP 1 Score: 107 bits (267), Expect = 1.670e-24 Identity = 66/216 (30.56%), Postives = 108/216 (50.00%), Query Frame = 1
Query: 28 LVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
+++TGASRGFGRCVA +F +Q + + +D+ L ARS++DL+ + + T + T +DLG+ D ++ + ++I Y+R +V+NAGS+GH+ E S L FN+ S W RF FGA + E P+E+ Q + +++VN++SL +QP ++G Y K AR+M H+
Sbjct: 5 VLITGASRGFGRCVAVDFAQQISAGDDLDIHLWARSEADLKETERMVQDAWERTHPSHTLRTFTLTVDLGNKDDYTPKIDALLAQIKAESYARVFVVHNAGSLGHLGLTQEWSSHEMLDQYWHFNVHSVLWFNKRFLEEFGASREE----LQKPAEA--------------------AQPPTLSVIVNVTSLFGIQPAATFGLYCLSKGAREMHHK 196 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7472.1.1 >prot_H-canaliculatus_M_contigs7472.1.1 ID=prot_H-canaliculatus_M_contigs7472.1.1|Name=mRNA_H-canaliculatus_M_contigs7472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=224bp MNAGRFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAAback to top mRNA from alignment at H-canaliculatus_M_contigs7472:4029..5202+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7472.1.1 ID=mRNA_H-canaliculatus_M_contigs7472.1.1|Name=mRNA_H-canaliculatus_M_contigs7472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1174bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7472:4029..5202+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7472:4029..5202+ >mRNA_H-canaliculatus_M_contigs7472.1.1 ID=mRNA_H-canaliculatus_M_contigs7472.1.1|Name=mRNA_H-canaliculatus_M_contigs7472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=672bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7472:4029..5202+ (Hapterophycus canaliculatus Oshoro7m male)back to top |