mRNA_H-canaliculatus_M_contigs7472.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs7472.1.1
Unique NamemRNA_H-canaliculatus_M_contigs7472.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR4_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 1.040e-98
Identity = 156/227 (68.72%), Postives = 180/227 (79.30%), Query Frame = 1
Query:    1 KKMNAGRFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGG--TAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
            ++MN GRFLL+VTGASRGFGRCVAEEFVRQ  PANPVDL+L+ARS++ L++A++++ EIA S + P GVVVR EP+DLGDLDHLEANLE VFSRIDP RYSRAVLVNNAGS+GH+   + LPSLA  RSEMDFNITSA WL+SRF+AVFGAK+       S       +G D    G  TA  A  DT  D SNN+VVNISSLAALQPFE+WGGYSSGKAARDMFHR
Sbjct:    4 QQMNGGRFLLLVTGASRGFGRCVAEEFVRQVAPANPVDLVLVARSETGLESATDSVNEIAASINAPGGVVVRKEPLDLGDLDHLEANLEGVFSRIDPTRYSRAVLVNNAGSLGHIGVASALPSLAAFRSEMDFNITSALWLSSRFSAVFGAKRPNLSSGNSVEGTLGESGADVDKNGATTAATASADTVHDVSNNIVVNISSLAALQPFETWGGYSSGKAARDMFHR 230          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FK79_PYTOL)

HSP 1 Score: 127 bits (318), Expect = 6.060e-32
Identity = 79/221 (35.75%), Postives = 114/221 (51.58%), Query Frame = 1
Query:   19 RFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRT--EPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
            R  +V+TGASRGFGRC+A +F R+ T A  VD+ L+AR + DL      + E   S +N     ++T  + +DLGD        + +  ++    Y R  LV+NAGSIG + F  ELPS A+L    +FN+ S  W   RF  V+GA + E + D    +   A                          +VNISS  A++PF+++G Y +GKAAR+M HR
Sbjct:    2 RSAVVITGASRGFGRCLALDFTREIT-AGDVDMFLLARHEGDLGETVRLVTEAWASKANAAESKLQTFVKTVDLGDQVDYVTKFDAILEQLQATAYDRVYLVHNAGSIGDLCFTQELPSPAELAQYWEFNVNSVVWFNKRFLDVYGATREELLSDAPLSASYQA-------------------------FIVNISSGCAIKPFKTYGMYCTGKAAREMHHR 196          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U7H4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.720e-29
Identity = 80/224 (35.71%), Postives = 123/224 (54.91%), Query Frame = 1
Query:   28 LVVTGASRGFGRCVA----EEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPD-----GVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFH 672
            +V+TGASRGFGR VA     E+V Q T      L+L+ARS   LQ  +  +      T   +      + V    +DL +L+  EA  +    ++      R +LVNNAG+IG +  + E+ S+ ++++EMD N+TSA ++ + FA  FGA +++ +H      E+   G  A  GG  +      PQ      ++N+SSLAA +PF+SWG Y +GKAAR++FH
Sbjct:    7 VVITGASRGFGRAVAVAMAREWVCQLT------LMLVARSSESLQETAAMLLRERSKTEGIEMPMDQSMAVSVAAVDLRNLEETEAWAKQAVDKLKGLAPDRIILVNNAGTIGGLGCIQEIESIKEMQTEMDLNVTSAMYITAAFARKFGAPRADRLH----AEENGHAGAAA--GGMGMPPAPPRPQ----TFIINVSSLAAREPFQSWGMYCAGKAAREIFH 214          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Sepiapterin (reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U863_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.440e-28
Identity = 89/230 (38.70%), Postives = 118/230 (51.30%), Query Frame = 1
Query:   19 RFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDP------------GRYSRAVLVNNAGSIGHMSFVTEL-PSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMF 669
            RFL+ +TGASRGFGRC+A E  R+  PA  VD+ LIAR+   L A    I E + S  +  GV V T P DLG+L+ LE N   +F+ +D              +Y    L NNAGS+G +++  +L   L  LR  +D N+TS+  + S F   F           SSPS      V A+                    ++NISS+AA+QPF SWG Y +GKAARDMF
Sbjct:    8 RFLVFITGASRGFGRCLALEAARKWGPA--VDMHLIARNAEALTAVKRDI-EASLSDQSKIGVRVWTWPFDLGNLETLEPNFARIFATVDEFSAEQESTAMIMHKYGNVYLFNNAGSVGPIAYAKDLCTDLPALRQSLDLNLTSSILITSLFLRRFCT--------LSSPSNK----VPAL-------------------FIINISSMAAIQPFHSWGVYCAGKAARDMF 203          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM32_9STRA)

HSP 1 Score: 117 bits (292), Expect = 8.270e-28
Identity = 81/243 (33.33%), Postives = 117/243 (48.15%), Query Frame = 1
Query:   22 FLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSN--------------------------NLVVNISSLAALQPFESWGGYSSGKAARDMFH 672
            +L++VTGASRG GRC+A+E VR     + + L+L+ARS+S L   + +I  +     N + V +  +P+DLG+L  LE +L+  FS +D   Y R VL NNAGS+G ++   +L S A LR  +D NITSA W+   F  +   +  +                                                               ++VVNISSLAA++PF +W  Y +GKAARDMFH
Sbjct:    6 WLVIVTGASRGLGRCLAQEAVRSIGKDHRMTLLLMARSESGLMETAASIRGM-----NSEDVTIEVQPVDLGNLSTLETSLQNAFSGLDARHYQRCVLFNNAGSLGELAPAMDL-SFAGLREAVDLNITSAMWVTCAFVNLILPRWQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMPDVVVNISSLAAVKPFPTWAAYCAGKAARDMFH 242          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W3N7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.030e-25
Identity = 75/235 (31.91%), Postives = 121/235 (51.49%), Query Frame = 1
Query:   19 RFLLVVTGASRGFGRCVAEEFVRQATPA---NPVDLILIARSQSDLQAASNAIGEIAG----STSNPDGVV-----VRTEPIDLGDLDHLEANLEVVF-----SRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFH 672
            R +++VTGASRG GR +A  FV++       +P+ ++L+ARS+  L    + + + A     +T+N +        +    IDL DLD+L+ NL  +      S+ +   + +A+L+NNAGS+GH+     + SL +L++ +DFNITS+ W+++RF   F  +                                         +VVNISSL A++PF++ G Y +GKAARDMFH
Sbjct:   40 RTVVIVTGASRGLGRAIALSFVKEEKTFQKFSPLRILLLARSEEGLVGTKSLMQQEADKFLDTTANDNDATSDLLDMTHHVIDLSDLDNLDDNLNDILDFSSSSKNNLPPFEKAILINNAGSLGHLGPCMNMTSLKELQTSLDFNITSSLWVSTRFVRSFSQQXXXXXXX--------------------------------KTVVVNISSLCAIEPFKTMGVYCTGKAARDMFH 242          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX65_PHATC)

HSP 1 Score: 109 bits (273), Expect = 1.980e-25
Identity = 82/228 (35.96%), Postives = 109/228 (47.81%), Query Frame = 1
Query:    7 MNAGRFLLVVTGASRGFGRCVAEEFVRQATPA-----NPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRI--DPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMF 669
            M     LLV+TGASRG GR +A EF   +          +  +LIARS S L+    AI   A +  +   + V    IDL DL+ L+  L+ VF +I  D  +Y R VLVNNAGS+G +    E PSL+ +R  +DFN+TSA W   RF           I D                         D   + +   +VNISSL A+QPF +   YS+ KAARD +
Sbjct:    1 MPVTNLLLVITGASRGLGRAIANEFCGPSLSGYWPSLRYIRAVLIARSTSGLEETRTAIE--ANTRKSDLNIRVDLHSIDLSDLNTLDHKLDAVFQQIQNDQIKYDRVVLVNNAGSLGALGPCLESPSLSDMRQTVDFNVTSALWTTVRFGRF--------IRD-------------------------DERTNDATTTIVNISSLVAVQPFPTMAIYSAVKAARDSY 193          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CF97_PYTOL)

HSP 1 Score: 108 bits (270), Expect = 7.130e-25
Identity = 71/219 (32.42%), Postives = 111/219 (50.68%), Query Frame = 1
Query:   19 RFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
            R ++V+TGASRG+GRC+A +F R+    + VD+ L AR ++DL      + E    +     + V T+ +DL         +E +  ++    Y +  LV+NAGS+G + +  EL S A+L +  + N+ S  W   RF  VFGA + E +  T                     AV   P  ++   ++NISSL A++PF + G Y +GKAAR+M  R
Sbjct:    2 RSVVVITGASRGYGRCLALDFAREIEQGD-VDMYLWARHEADLAETKRLVHEAWQQSKG--ALDVATQVVDLSLQADYVPKIETLIVQLQSKSYEQVFLVHNAGSLGDLGYTNELSSPAQLSAYWELNVNSVVWFNKRFLDVFGATREELVAST---------------------AVSTKPATQAT--IINISSLCAIEPFATQGLYCTGKAAREMHFR 194          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Sepiapterin (reductase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBF2_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.270e-24
Identity = 71/219 (32.42%), Postives = 110/219 (50.23%), Query Frame = 1
Query:   28 LVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEI---AGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
            ++VTGASRGFGR +A +    A     + ++L A S   LQ  +  +       G  +  + + V    +D+ DL  +EA  +     +  G+ SR +LVNNAG++G +  V EL     ++  +D N+TS   L + F   FGA +S+                         AA  + P+ ++   V+N+SSLAAL+PF++WG Y   KAAR+MFHR
Sbjct:   25 VLVTGASRGFGRALAMQMA--ARWPQKLTIVLAASSSEGLQETATLLVNARVKTGVKNLEESMAVSVAAVDMRDLPAVEAWAQTAMDVLQAGKPSRVILVNNAGTVGDLGTVAELRDWQSVQKNLDLNVTSCMSLTAEFTRRFGAPRSDR------------------------AAAKELPRPEA--FVINVSSLAALEPFQTWGNYCVTKAAREMFHR 215          
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFV0_GLOUD)

HSP 1 Score: 107 bits (267), Expect = 1.670e-24
Identity = 66/216 (30.56%), Postives = 108/216 (50.00%), Query Frame = 1
Query:   28 LVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAASNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSRAVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAKKSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLAALQPFESWGGYSSGKAARDMFHR 675
            +++TGASRGFGRCVA +F +Q +  + +D+ L ARS++DL+     + +    T     +   T  +DLG+ D     ++ + ++I    Y+R  +V+NAGS+GH+    E  S   L     FN+ S  W   RF   FGA + E       P+E+                     Q  + +++VN++SL  +QP  ++G Y   K AR+M H+
Sbjct:    5 VLITGASRGFGRCVAVDFAQQISAGDDLDIHLWARSEADLKETERMVQDAWERTHPSHTLRTFTLTVDLGNKDDYTPKIDALLAQIKAESYARVFVVHNAGSLGHLGLTQEWSSHEMLDQYWHFNVHSVLWFNKRFLEEFGASREE----LQKPAEA--------------------AQPPTLSVIVNVTSLFGIQPAATFGLYCLSKGAREMHHK 196          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7472.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.040e-9868.72protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.060e-3235.75protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Hypothetical2.720e-2935.71protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=... [more]
Sepiapterin1.440e-2838.70reductase n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
Uncharacterized8.270e-2833.33protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.030e-2531.91protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Predicted1.980e-2535.96protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Uncharacterized7.130e-2532.42protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Sepiapterin1.270e-2432.42reductase n=1 Tax=Pinguiococcus pyrenoidosus TaxID... [more]
Uncharacterized1.670e-2430.56protein n=1 Tax=Globisporangium ultimum (strain AT... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs7472contigH-canaliculatus_M_contigs7472:4029..5202 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQR4
Preferred nameSPR
PFAMsadh_short
Model size678
Max annot lvl2759|Eukaryota
KEGG rclassRC00017,RC00425,RC00602,RC00823,RC02162
KEGG koko:K00072,ko:K05858,ko:K16489
KEGG ReactionR01813,R02975,R03332,R03435,R08208,R10952,R11762,R11763
KEGG Pathwayko00562,ko00790,ko01100,ko04015,ko04020,ko04022,ko04062,ko04070,ko04071,ko04072,ko04261,ko04270,ko04310,ko04371,ko04540,ko04611,ko04621,ko04713,ko04720,ko04723,ko04724,ko04725,ko04726,ko04728,ko04730,ko04745,ko04750,ko04911,ko04912,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04924,ko04925,ko04926,ko04927,ko04933,ko04934,ko04961,ko04970,ko04971,ko04972,ko05010,ko05016,ko05142,ko05143,ko05146,ko05200,map00562,map00790,map01100,map04015,map04020,map04022,map04062,map04070,map04071,map04072,map04261,map04270,map04310,map04371,map04540,map04611,map04621,map04713,map04720,map04723,map04724,map04725,map04726,map04728,map04730,map04745,map04750,map04911,map04912,map04915,map04916,map04918,map04919,map04921,map04922,map04924,map04925,map04926,map04927,map04933,map04934,map04961,map04970,map04971,map04972,map05010,map05016,map05142,map05143,map05146,map05200
KEGG ModuleM00130,M00842
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000902,GO:0000904,GO:0001505,GO:0003674,GO:0003824,GO:0004033,GO:0004757,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006066,GO:0006082,GO:0006520,GO:0006558,GO:0006584,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0006809,GO:0006950,GO:0006979,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009108,GO:0009653,GO:0009712,GO:0009987,GO:0010033,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0018958,GO:0019222,GO:0019438,GO:0019751,GO:0019752,GO:0019889,GO:0022008,GO:0030154,GO:0030182,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032768,GO:0032989,GO:0034311,GO:0034312,GO:0034641,GO:0036094,GO:0040008,GO:0040014,GO:0042133,GO:0042136,GO:0042221,GO:0042415,GO:0042417,GO:0042428,GO:0042430,GO:0042558,GO:0042559,GO:0042802,GO:0042803,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046209,GO:0046483,GO:0046983,GO:0048037,GO:0048468,GO:0048638,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050661,GO:0050662,GO:0050789,GO:0050790,GO:0050793,GO:0050879,GO:0050881,GO:0050882,GO:0050896,GO:0050999,GO:0051186,GO:0051188,GO:0051239,GO:0051341,GO:0055114,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0071704,GO:0071840,GO:0072593,GO:0097159,GO:0097164,GO:1901160,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901615,GO:1901617,GO:1902221,GO:1903409,GO:2001057
Exons2
Evalue3.17e-99
EggNOG OGsCOG1028@1|root,KOG1204@2759|Eukaryota
EC1.1.1.153,3.1.4.11
Descriptionsepiapterin reductase
Cds size672
COG categoryIQ
BRITEko00000,ko00001,ko00002,ko01000,ko03036,ko04131,ko04147
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854084.8928895-UTR-H-canaliculatus_M_contigs7472:4028..40341696854084.8928895-UTR-H-canaliculatus_M_contigs7472:4028..4034Hapterophycus canaliculatus Oshoro7m maleUTRH-canaliculatus_M_contigs7472 4029..4034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854084.9056556-CDS-H-canaliculatus_M_contigs7472:4034..43141696854084.9056556-CDS-H-canaliculatus_M_contigs7472:4034..4314Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7472 4035..4314 +
1696854084.915809-CDS-H-canaliculatus_M_contigs7472:4810..52021696854084.915809-CDS-H-canaliculatus_M_contigs7472:4810..5202Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs7472 4811..5202 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs7472.1.1prot_H-canaliculatus_M_contigs7472.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs7472 4035..5202 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs7472.1.1

>prot_H-canaliculatus_M_contigs7472.1.1 ID=prot_H-canaliculatus_M_contigs7472.1.1|Name=mRNA_H-canaliculatus_M_contigs7472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=224bp
MNAGRFLLVVTGASRGFGRCVAEEFVRQATPANPVDLILIARSQSDLQAA
SNAIGEIAGSTSNPDGVVVRTEPIDLGDLDHLEANLEVVFSRIDPGRYSR
AVLVNNAGSIGHMSFVTELPSLAKLRSEMDFNITSASWLASRFAAVFGAK
KSEPIHDTSSPSESNATGVDAIDGGTAVAAVGDTPQDKSNNLVVNISSLA
ALQPFESWGGYSSGKAARDMFHR*
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mRNA from alignment at H-canaliculatus_M_contigs7472:4029..5202+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs7472.1.1 ID=mRNA_H-canaliculatus_M_contigs7472.1.1|Name=mRNA_H-canaliculatus_M_contigs7472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=1174bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7472:4029..5202+ (Hapterophycus canaliculatus Oshoro7m male)
AAAAAGATGAACGCTGGAAGATTTCTGCTTGTGGTTACGGGAGCATCTCG AGGCTTCGGGCGTTGCGTGGCTGAGGAGTTTGTTCGCCAGGCCACCCCCG CGAATCCTGTCGACCTCATTCTCATCGCGAGAAGCCAGAGTGATCTCCAG GCGGCAAGCAATGCTATCGGAGAGATTGCGGGGAGTACCAGCAATCCGGA TGGCGTTGTTGTTCGAACGGAACCAATAGATTTGGGAGACTTGGATCATC TGGAGGCAAACTTGGAGGTTGTTTTCAGCCGAATCGGTGAGGATCGTCTT GCTGAAAATCAGGCCCATCGCGCTTCTGTTGAGTAGCGGTCGGTGTTCAA GCATGACTGCCGTGGCGGCTGTTGCTGATGGCTTAGATGAATACGTGGGT CATCCGCGACCATGGTCGTTGAAGTTTACATGTGAACGCGGAAACAGTGA AATGTAAACCACCTTAACAGCGTGCACCAACAAATAACATCAACCCTACC GTAAAGCCTGCCCGCCAATCGGTTTCATTCAGCTGGCTATCAACAAACTG ATGCAGTACCTCGTCCTACGTGATCGTCTCGGAACGCATGGCTCTTGCAT AAGCAACCTGCCCAACGGAACGGTGTTGTTGCCTACCCAGCATGCAGAAC GGTGCAAGTAGGCGGCTGAAGTTGTTCTTTGGCCGATTTTGTTGCACGCA CACTCACACACACACACACACACACACACACACACACTTTCCTCTCCATC CGGCGGCGTACCCTGAATGAAACCCTCCACAGACCCAGGCCGCTACTCAC GCGCGGTGCTGGTAAATAACGCTGGGTCTATCGGCCACATGAGCTTCGTG ACGGAGCTGCCCTCGCTGGCCAAGCTTCGTTCTGAGATGGATTTCAACAT CACTTCAGCCTCGTGGCTTGCTTCGCGCTTCGCCGCTGTTTTTGGGGCTA AAAAGTCGGAACCAATCCACGACACGTCTTCTCCCAGCGAAAGCAACGCG ACCGGAGTGGATGCCATCGATGGGGGCACCGCTGTTGCCGCTGTTGGTGA CACGCCCCAAGACAAGTCGAACAACCTCGTGGTGAATATCTCGAGCCTGG CCGCGTTGCAACCGTTCGAGTCCTGGGGCGGGTACAGTTCTGGAAAAGCT GCTCGAGACATGTTTCACAGGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7472:4029..5202+

>mRNA_H-canaliculatus_M_contigs7472.1.1 ID=mRNA_H-canaliculatus_M_contigs7472.1.1|Name=mRNA_H-canaliculatus_M_contigs7472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=672bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7472:4029..5202+ (Hapterophycus canaliculatus Oshoro7m male)
ATGAACGCTGGAAGATTTCTGCTTGTGGTTACGGGAGCATCTCGAGGCTT
CGGGCGTTGCGTGGCTGAGGAGTTTGTTCGCCAGGCCACCCCCGCGAATC
CTGTCGACCTCATTCTCATCGCGAGAAGCCAGAGTGATCTCCAGGCGGCA
AGCAATGCTATCGGAGAGATTGCGGGGAGTACCAGCAATCCGGATGGCGT
TGTTGTTCGAACGGAACCAATAGATTTGGGAGACTTGGATCATCTGGAGG
CAAACTTGGAGGTTGTTTTCAGCCGAATCGACCCAGGCCGCTACTCACGC
GCGGTGCTGGTAAATAACGCTGGGTCTATCGGCCACATGAGCTTCGTGAC
GGAGCTGCCCTCGCTGGCCAAGCTTCGTTCTGAGATGGATTTCAACATCA
CTTCAGCCTCGTGGCTTGCTTCGCGCTTCGCCGCTGTTTTTGGGGCTAAA
AAGTCGGAACCAATCCACGACACGTCTTCTCCCAGCGAAAGCAACGCGAC
CGGAGTGGATGCCATCGATGGGGGCACCGCTGTTGCCGCTGTTGGTGACA
CGCCCCAAGACAAGTCGAACAACCTCGTGGTGAATATCTCGAGCCTGGCC
GCGTTGCAACCGTTCGAGTCCTGGGGCGGGTACAGTTCTGGAAAAGCTGC
TCGAGACATGTTTCACAGGTAA
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