mRNA_H-canaliculatus_M_contigs74677.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs74677.1.1
Unique NamemRNA_H-canaliculatus_M_contigs74677.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Cyclin-dependent (kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV3_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 5.120e-12
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 1 
Query:    1 KLLYYDPKRRISAKRALEHSFFDDLDKTDLLHN 99
            KLLYYDPK+RISAKRALEH+FFDDLDKTDLL N
Sbjct:  269 KLLYYDPKKRISAKRALEHAFFDDLDKTDLLGN 301
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL6_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 2.550e-6
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 1 
Query:    4 LLYYDPKRRISAKRALEHSFFDDLDKTDLL 93
            LL YDPK R+SAKRAL+H FFDDLDK  L+
Sbjct:  266 LLAYDPKARLSAKRALKHPFFDDLDKASLM 295
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Uncharacterized (protein n=6 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0VK13_9MAGN)

HSP 1 Score: 47.0 bits (110), Expect = 2.760e-6
Identity = 18/29 (62.07%), Postives = 26/29 (89.66%), Query Frame = 1 
Query:    4 LLYYDPKRRISAKRALEHSFFDDLDKTDL 90
            +L Y+P +RISAK+A+EH +FDDLDK++L
Sbjct:    2 MLQYEPSKRISAKKAMEHRYFDDLDKSNL 30
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N917_9EUKA)

HSP 1 Score: 50.4 bits (119), Expect = 3.620e-6
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1 
Query:    1 KLLYYDPKRRISAKRALEHSFFDDLDKTDLLH 96
            K+L YDP +RISAKRAL+H +FDDLDK    H
Sbjct:  323 KMLVYDPSKRISAKRALDHPYFDDLDKQQYSH 354
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: B2-type (cyclin dependent kinase n=17 Tax=Magnoliopsida TaxID=3398 RepID=Q9FSH4_SOLLC)

HSP 1 Score: 50.1 bits (118), Expect = 4.890e-6
Identity = 20/29 (68.97%), Postives = 26/29 (89.66%), Query Frame = 1 
Query:    4 LLYYDPKRRISAKRALEHSFFDDLDKTDL 90
            +L+Y+P RRISAK+A+EH +FDDLDKT L
Sbjct:  287 MLHYEPSRRISAKKAMEHPYFDDLDKTPL 315
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: cyclin-dependent (kinase 1-like n=1 Tax=Penaeus monodon TaxID=6687 RepID=UPI0018A7A7DB)

HSP 1 Score: 47.4 bits (111), Expect = 6.470e-6
Identity = 21/30 (70.00%), Postives = 24/30 (80.00%), Query Frame = 1 
Query:    1 KLLYYDPKRRISAKRALEHSFFDDLDKTDL 90
            K L YDP RRISAK AL+H +FDDLDK+ L
Sbjct:   55 KTLIYDPTRRISAKEALKHPYFDDLDKSTL 84
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Cyclin-dependent (kinase 1-like protein n=4 Tax=Chondrichthyes TaxID=7777 RepID=K4GLI1_CALMI)

HSP 1 Score: 49.3 bits (116), Expect = 9.080e-6
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 1 
Query:    1 KLLYYDPKRRISAKRALEHSFFDDLDKTDLLHN 99
            K L YDP +RISAK+AL H +FDDLDKT+L  N
Sbjct:  265 KTLIYDPAKRISAKQALNHPYFDDLDKTNLPAN 297
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Putative (cell division control protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251U491_HELAN)

HSP 1 Score: 49.3 bits (116), Expect = 9.140e-6
Identity = 21/30 (70.00%), Postives = 26/30 (86.67%), Query Frame = 1 
Query:    1 KLLYYDPKRRISAKRALEHSFFDDLDKTDL 90
            K+L Y+P RRISAK+A+EH +FDDLDKT L
Sbjct:  280 KMLEYEPSRRISAKKAMEHRYFDDLDKTYL 309
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Protein (kinase domain-containing protein n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QBC1_SPIOL)

HSP 1 Score: 49.3 bits (116), Expect = 9.180e-6
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 1 
Query:    1 KLLYYDPKRRISAKRALEHSFFDDLDKTDL 90
            K+L Y+P +RISAK+A+EH +FDDLDKT L
Sbjct:  288 KMLIYEPSKRISAKKAMEHPYFDDLDKTHL 317
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BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DKN8_OPUST)

HSP 1 Score: 48.5 bits (114), Expect = 1.180e-5
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 1 
Query:    1 KLLYYDPKRRISAKRALEHSFFDDLDKTDL 90
            K+L Y+P +RISAK+A+EH +FDDLDKT L
Sbjct:  168 KMLIYEPSKRISAKKAMEHPYFDDLDKTYL 197
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74677.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cyclin-dependent5.120e-1290.91kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV3_... [more]
Protein2.550e-673.33kinase domain-containing protein n=2 Tax=Ectocarpu... [more]
Uncharacterized2.760e-662.07protein n=6 Tax=Nymphaea colorata TaxID=210225 Rep... [more]
Protein3.620e-665.63kinase domain-containing protein n=1 Tax=Planoprot... [more]
B2-type4.890e-668.97cyclin dependent kinase n=17 Tax=Magnoliopsida Tax... [more]
cyclin-dependent6.470e-670.00kinase 1-like n=1 Tax=Penaeus monodon TaxID=6687 R... [more]
Cyclin-dependent9.080e-666.67kinase 1-like protein n=4 Tax=Chondrichthyes TaxID... [more]
Putative9.140e-670.00cell division control protein n=1 Tax=Helianthus a... [more]
Protein9.180e-666.67kinase domain-containing protein n=4 Tax=Chenopodi... [more]
Protein1.180e-566.67kinase domain-containing protein n=1 Tax=Opuntia s... [more]

Pages

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74677contigH-canaliculatus_M_contigs74677:120..221 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LMV3
Preferred nameCDKB
PFAMsPkinase
Model size102
Max annot lvl2759|Eukaryota
KEGG koko:K02087,ko:K02206,ko:K07760
KEGG Pathwayko04068,ko04110,ko04114,ko04115,ko04151,ko04218,ko04540,ko04914,ko04934,ko05161,ko05162,ko05165,ko05168,ko05169,ko05200,ko05203,ko05215,ko05222,ko05226,map04068,map04110,map04114,map04115,map04151,map04218,map04540,map04914,map04934,map05161,map05162,map05165,map05168,map05169,map05200,map05203,map05215,map05222,map05226
KEGG ModuleM00692,M00693
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0000003,GO:0000082,GO:0000086,GO:0000278,GO:0000307,GO:0000902,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004693,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006325,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007049,GO:0007154,GO:0007165,GO:0007275,GO:0007346,GO:0008150,GO:0008152,GO:0008284,GO:0009058,GO:0009059,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009791,GO:0009793,GO:0009826,GO:0009888,GO:0009889,GO:0009934,GO:0009987,GO:0010016,GO:0010033,GO:0010103,GO:0010154,GO:0010374,GO:0010376,GO:0010389,GO:0010440,GO:0010444,GO:0010468,GO:0010556,GO:0010564,GO:0016043,GO:0016049,GO:0016301,GO:0016310,GO:0016569,GO:0016570,GO:0016572,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0022414,GO:0022603,GO:0023052,GO:0030154,GO:0030332,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0032870,GO:0032875,GO:0032989,GO:0032991,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0042023,GO:0042127,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044839,GO:0044843,GO:0046483,GO:0046777,GO:0048316,GO:0048366,GO:0048367,GO:0048509,GO:0048518,GO:0048522,GO:0048589,GO:0048608,GO:0048646,GO:0048731,GO:0048825,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051239,GO:0051276,GO:0051716,GO:0051726,GO:0060255,GO:0060560,GO:0061458,GO:0061695,GO:0065007,GO:0070887,GO:0071310,GO:0071495,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090329,GO:0090558,GO:0090626,GO:0090627,GO:0090698,GO:0097472,GO:0099402,GO:0140096,GO:1901360,GO:1901564,GO:1901576,GO:1901987,GO:1901990,GO:1902494,GO:1902554,GO:1902749,GO:1902806,GO:1902911,GO:1903047,GO:1990234,GO:2000026,GO:2000037,GO:2000112
Exons1
Evalue8.4e-13
EggNOG OGsKOG0594@1|root,KOG0594@2759|Eukaryota
EC2.7.11.22,2.7.11.23
Descriptioncyclin-dependent protein serine/threonine kinase activity
Cds size102
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03032,ko03036,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854084.2894726-CDS-H-canaliculatus_M_contigs74677:119..2211696854084.2894726-CDS-H-canaliculatus_M_contigs74677:119..221Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74677 120..221 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74677.1.1prot_H-canaliculatus_M_contigs74677.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs74677 120..221 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs74677.1.1

>prot_H-canaliculatus_M_contigs74677.1.1 ID=prot_H-canaliculatus_M_contigs74677.1.1|Name=mRNA_H-canaliculatus_M_contigs74677.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=34bp
KLLYYDPKRRISAKRALEHSFFDDLDKTDLLHN*
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mRNA from alignment at H-canaliculatus_M_contigs74677:120..221+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs74677.1.1 ID=mRNA_H-canaliculatus_M_contigs74677.1.1|Name=mRNA_H-canaliculatus_M_contigs74677.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=102bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74677:120..221+ (Hapterophycus canaliculatus Oshoro7m male)
AAACTGCTGTACTACGACCCGAAGAGGCGAATTTCGGCCAAGCGCGCGTT
GGAACACTCGTTTTTCGACGACCTCGACAAGACCGACTTGCTGCACAACT
GA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74677:120..221+

>mRNA_H-canaliculatus_M_contigs74677.1.1 ID=mRNA_H-canaliculatus_M_contigs74677.1.1|Name=mRNA_H-canaliculatus_M_contigs74677.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=102bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74677:120..221+ (Hapterophycus canaliculatus Oshoro7m male)
AAACTGCTGTACTACGACCCGAAGAGGCGAATTTCGGCCAAGCGCGCGTT
GGAACACTCGTTTTTCGACGACCTCGACAAGACCGACTTGCTGCACAACT
GA
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