mRNA_H-canaliculatus_M_contigs7465.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL/TRIO, (N-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG14_ECTSI) HSP 1 Score: 469 bits (1206), Expect = 2.420e-151 Identity = 322/550 (58.55%), Postives = 349/550 (63.45%), Query Frame = 1
Query: 1 RVLRRRTLEGGGGGRREGVVATEAVEGHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGGTGPRQEDLPSLADALLAAGSRGGRRSAKRAXXXXXXXXXPAPSSVSSPAGSGVFVKPRVASYLLATPEEGGKLG----SQDEDXXXXXXXXXXXXXXXXXXXXXXHWGSAGXXXXXXXXXXXXXXXXXXXXXXXXXSVATSDEEFFDALAELDQSNTCRGGGTRRRNRSSRLGSRSGSDVEAGRCFTSSENSRRAPPLSGHGGESAVAGCQGRQPSDGAAGDGEEGGPAEEE----GRTKRLL------SALLGWCYTPVLRRLDRKCVDQLSRWLCYANATSASLAVAVVVTGAFSLSRAKVLGLQWCAVTAVCLGSLLLLLALIGTAGARLRNRFTLLGFAALEAAVAFGMLVSGAWCLALAGGSATLSDLTWEAMHHEIRNMEEERASWDEERRFRQLRRCFLEANGLCTIFACVCAG 1608
RVLRRRTLE A GHIVDTAVVVIDT GLTLRHVTKAFVRLFK+RA+MDQLLFPE+LGKCFIVNTP LFSYVW+MFSP+VDERTRSKI+IIS+ QDWTKALQEIADPDQLSPEYGGTG R+EDLPSLADAL AAGSRGG RS XXXXXXXX V S +P E + +D W SA XXXXXXXXXXXX SVATSDEEFFDALAELD + R G +G G G +G P E R + LL SA+LGWCY PVLRRL++K VD+L RWLC+ANA SASLAVAVVVTGAFSLSRA VLGLQWCAVTAVCLGSLLLLLAL+G AGARLRNRF+LLGFA LE AVA GML+SG WCLALAGGSATLSDLTWEAM+ EIRNMEEE A D+E+RF+QLRR EAN LCTIFACVC G
Sbjct: 167 RVLRRRTLEX----XXXXXXAAAERAGHIVDTAVVVIDTGGLTLRHVTKAFVRLFKLRAHMDQLLFPEMLGKCFIVNTPSLFSYVWSMFSPLVDERTRSKISIISKPQDWTKALQEIADPDQLSPEYGGTGRRKEDLPSLADALYAAGSRGGSRSXXXXXXXXXXXXCXXXXXXXXXXXXXXKVGVAARSQARLSPPEPPQQEHLEHEEDVAIKGSEHRGWFGGRAATWGPVGWFWSSAWGXXXXXXXXXXXXGVAEGMREDAEESVATSDEEFFDALAELDHFHASRSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGLAEELG----GNDGRPRRPEHAAVDRGRALLPGRPRVSAVLGWCYQPVLRRLNQKGVDKLVRWLCFANAVSASLAVAVVVTGAFSLSRATVLGLQWCAVTAVCLGSLLLLLALLGAAGARLRNRFSLLGFAVLEGAVAVGMLLSGTWCLALAGGSATLSDLTWEAMNKEIRNMEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTG 708
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL-TRIO (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG98_9PHAE) HSP 1 Score: 372 bits (955), Expect = 4.780e-115 Identity = 287/577 (49.74%), Postives = 317/577 (54.94%), Query Frame = 1
Query: 181 MDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGGTGPRQEDLPSLADALLAAGSRGGRR-----------SAKRAXXXXXXXXXPAPSSVSSPAGSGVF-----VKPRVASYLLATPEEGGKLGSQDEDXXXXXXXXXXXXXXXXXXXXXXHW-GSAGXXXXXXXXXXXXXXXXXXXXXXXXXSVATSDEEFFDALAELDQSNTCRGGGTRRRNRSSRLGSRSGS-----------------DVEAGRC---------FTSSENSRRA-------PPLSGHGGESAVAGCQGRQPSDGAAGDGEEGGPAEEEGRTKRL-----LSALLGWCYTPVLRRLDRKCVDQLSRWLCYANATSASLAVAVVVTGAFSLSRAKVLGLQWCAVTAVCLGSLLLLLALIGTAGARLRNRFTLLGFAALEAAVAFGMLVSGAWCLALAGGSATLSDLTWEAMHHE----------------------------------------------IRNMEEERASWDEERRFRQLRRCFLEANGLCTIFACVCAG 1608
MDQLLFPE+LGKCFIVNTP LFSYVW+MFSP+VDERTRSKI+IIS+ QDW KALQEIADPDQLSPEYGGTG RQEDLPSLADAL AAGSRG +A P P+ V P + L +E+ W S+ XXXXXXXXXXXXXXXXXXX S+ TSDEEFFDALAELD + R G DVE GR + S + A PP G G VAG RQ G G GG R L +SA+LGWCY PVLRRL++K VD+L RWLC+ANA SASLAVAVVVTGAFSLSRA VLGLQWCAVTAVCLGSLLLLLAL+G AGARLRNRF+LLGF LE AVA GML+SG WCLALAGGSATLSDLTWEA+++E IRNMEEE A D+E+RF+QLRR EAN LCTIFACVC G
Sbjct: 1 MDQLLFPEMLGKCFIVNTPSLFSYVWSMFSPLVDERTRSKISIISKPQDWAKALQEIADPDQLSPEYGGTGRRQEDLPSLADALYAAGSRGXXXXXXXXXXXXXXAACNGNASGGSNENPLPNGXXXXXXXXXXXXXXGVAPGRQARLXXXXXXXXXHLEHEEEVAIKGGEHRGWFGGRAVTWGPVGWLWSSAWGXXXXXXXXXXXXXXXXXXXDAEESITTSDEEFFDALAELDHFHASRSTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMDVEVGRSPSGTAVDAVWRRSWGGKAADLADLSTPPSIGRG--VRVAGPPPRQ------GLGHGGGGGVSVARRALLSGRPRVSAVLGWCYQPVLRRLNQKGVDKLVRWLCFANAVSASLAVAVVVTGAFSLSRATVLGLQWCAVTAVCLGSLLLLLALLGAAGARLRNRFSLLGFVVLEGAVAVGMLLSGTWCLALAGGSATLSDLTWEAINNEREMSGTKEDFLSGAQSRLVLLGSTGLVLALFSVVGPCLLASVLLGKIRNMEEETARRDDEKRFKQLRRSAQEANALCTIFACVCTG 569
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL-TRIO (domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC3_9STRA) HSP 1 Score: 129 bits (325), Expect = 3.370e-30 Identity = 60/105 (57.14%), Postives = 78/105 (74.29%), Query Frame = 1
Query: 79 GHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGGTG 393
G IVD+ VV+IDT G+ +R VT F+ L K A++DQ ++PE+LG+ FI+NTPGLF+YVW MF+P++D RTR KI I SR +DW AL E+ D L PEYGGTG
Sbjct: 187 GAIVDSVVVIIDTGGMAMRQVTADFIALMKRVAHVDQAMYPELLGQMFIINTPGLFTYVWKMFAPLLDSRTRDKIKIFSRPRDWQPALLELIPADVLPPEYGGTG 291
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL/TRIO, (amine-terminal domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7M251_TETTS) HSP 1 Score: 77.0 bits (188), Expect = 1.390e-11 Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 79 GHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGG 387
GH VD V ++D G+ ++ ++K ++ + + Q +PEILG+ FIVN P LFS VWA+ P +DE+TR+KI II + + L EI D D + GG
Sbjct: 151 GHRVDQTVTILDLKGIPMKMLSKQVYNFIQLASKVAQENYPEILGRMFIVNAPMLFSGVWAVIKPWIDEKTRNKITIIG--SGFKEKLLEIIDIDNIPDFLGG 251
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL-TRIO (domain-containing protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L1LAY5_THEEQ) HSP 1 Score: 75.5 bits (184), Expect = 2.820e-11 Identity = 37/112 (33.04%), Postives = 59/112 (52.68%), Query Frame = 1
Query: 61 ATEAVEGHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGGTGP 396
A G V+ + ++D G + + + Q +PE+LGK VNTPG+FS +WA+FS ++D++T KI +IS + + + E+ +PDQL GGT P
Sbjct: 162 AASLKSGKRVEQLLTILDLRGFQMSQINTKLKAFLSAMTLVTQNYYPELLGKLLFVNTPGMFSALWAIFSGLLDKKTLGKITVISSKTESRAKILELVEPDQLPEFLGGTQP 273
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL-TRIO (domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YEY5_PLABS) HSP 1 Score: 75.1 bits (183), Expect = 3.620e-11 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 79 GHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGG 387
G V V ++D GL++ H + A K A +DQ +PEIL + FIVN P +FS VW M P +DE+T+SKI+I SR+ D +++ E+ + D L GG
Sbjct: 155 GRPVSQQVTILDMDGLSMSHASSAVYAYIKGCAEIDQSYYPEILSRMFIVNAPAVFSVVWKMIKPWLDEKTQSKISI-SRKSD-AESILELVEADVLPEFLGG 255
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL-TRIO (domain-containing protein n=1 Tax=Theileria equi strain WA TaxID=1537102 RepID=L0AX84_THEEQ) HSP 1 Score: 75.5 bits (184), Expect = 1.430e-10 Identity = 37/112 (33.04%), Postives = 59/112 (52.68%), Query Frame = 1
Query: 61 ATEAVEGHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGGTGP 396
A G V+ + ++D G + + + Q +PE+LGK VNTPG+FS +WA+FS ++D++T KI +IS + + + E+ +PDQL GGT P
Sbjct: 787 AASLKSGKRVEQLLTILDLRGFQMSQINTKLKAFLSAMTLVTQNYYPELLGKLLFVNTPGMFSALWAIFSGLLDKKTLGKITVISSKTESRAKILELVEPDQLPEFLGGTQP 898
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: CRAL-TRIO (domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QBH9_PSEPJ) HSP 1 Score: 72.0 bits (175), Expect = 7.440e-10 Identity = 37/110 (33.64%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 61 ATEAVEGHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGGT 390
A ++G VD V ++D G +++ ++K ++ + + Q +PEILG+ FIVN P LF+ +W + P +DE+TR+KI I+ + + + L E+ D + L GGT
Sbjct: 156 ACSVLKGEKVDQTVTILDLKGASMKMMSKTVYNFIQLASKVAQDNYPEILGRMFIVNAPMLFTGIWQIIKPWLDEKTRNKITIMGGK--YKEKLLELIDAENLPDFLGGT 263
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: Protein (real-time n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226EV67_FOLCA) HSP 1 Score: 67.0 bits (162), Expect = 1.020e-8 Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 1
Query: 130 LRHVTKA-FVRLFKMRAYMD-----QLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAII-SRRQDWTKALQEIADPDQLSPEYGGTGPRQEDLPSLAD 426
L+H T A F + A +D + +PE LG+C I+N+P +FS ++A+ P + E T +KI+I S +W KA++E+ DP QL YGG + + P+L D
Sbjct: 157 LKHFTYAKFAHKRSVEALLDLVKIYEANYPETLGRCLIINSPRIFSMLFAIVKPFLSENTVNKISIFDSNEANWKKAVEEVIDPSQLPIRYGG----RVENPALMD 258
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KRP3_EUPCR) HSP 1 Score: 66.2 bits (160), Expect = 2.120e-8 Identity = 37/116 (31.90%), Postives = 62/116 (53.45%), Query Frame = 1
Query: 61 ATEAVEGHIVDTAVVVIDTAGLTLRHVTKAFVRLFKMRAYMDQLLFPEILGKCFIVNTPGLFSYVWAMFSPMVDERTRSKIAIISRRQDWTKALQEIADPDQLSPEYGGTGPRQED 408
A A G ++ +I G T++ + + K+ + Q +PEI+GK IV++P +F WA+ SP +DE+TR+KI+I+ + + K L E DP+ + + GG ED
Sbjct: 153 AASAAAGKKIEQTFNLISIKGFTMKKLRQKTRNFIKLAVNIGQDNYPEIMGKMLIVDSPLIFRGAWALISPFIDEKTRTKISILGGK--YQKKLFEHVDPENVPSDLGGECTCSED 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7465.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7465.1.1 >prot_H-canaliculatus_M_contigs7465.1.1 ID=prot_H-canaliculatus_M_contigs7465.1.1|Name=mRNA_H-canaliculatus_M_contigs7465.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=537bp RVLRRRTLEGGGGGRREGVVATEAVEGHIVDTAVVVIDTAGLTLRHVTKAback to top mRNA from alignment at H-canaliculatus_M_contigs7465:41..5276- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7465.1.1 ID=mRNA_H-canaliculatus_M_contigs7465.1.1|Name=mRNA_H-canaliculatus_M_contigs7465.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=5236bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7465:41..5276- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7465:41..5276- >mRNA_H-canaliculatus_M_contigs7465.1.1 ID=mRNA_H-canaliculatus_M_contigs7465.1.1|Name=mRNA_H-canaliculatus_M_contigs7465.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=1611bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7465:41..5276- (Hapterophycus canaliculatus Oshoro7m male)back to top |