mRNA_H-canaliculatus_M_contigs74628.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs74628.1.1
Unique NamemRNA_H-canaliculatus_M_contigs74628.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A7Y2D0W2_9RHOB)

HSP 1 Score: 280 bits (715), Expect = 5.510e-94
Identity = 142/171 (83.04%), Postives = 150/171 (87.72%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMS 513
            KTL LPVP   EL+ LL AAARTPDHGKLEPWRFIV+E  AMARLAEIVQ RGEAL L PEQITKGR QFDQG+LAVVVVEV KPSEKIPALEQTYSAGA CL+LLNAALAAGWGANWLSGWASHDR FM +   L+P E+IAGIIHIGTETS PPERPRPDIESITSW+S
Sbjct:   21 KTLGLPVPGREELLTLLRAAARTPDHGKLEPWRFIVIERPAMARLAEIVQRRGEALDLAPEQITKGRTQFDQGDLAVVVVEVHKPSEKIPALEQTYSAGAVCLSLLNAALAAGWGANWLSGWASHDRDFMREGLDLSPHEKIAGIIHIGTETSAPPERPRPDIESITSWLS 191          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=1 Tax=Sulfitobacter noctilucicola TaxID=1342301 RepID=A0A7W6MBW8_9RHOB)

HSP 1 Score: 279 bits (714), Expect = 7.820e-94
Identity = 141/172 (81.98%), Postives = 148/172 (86.05%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMSD 516
            KTL LPVP    L+PLLTAAARTPDHGKLEPWRFIV++ AAM +LA I Q RGEALGLD EQI KGRGQFDQG LAVVVVEVQKPS KIP LEQTYS GA CLALLNAALAAGWGANWLSGWASHDR FM QAF LAP ERIAGIIHIGTETS PPERPRPDI  +T+W+SD
Sbjct:   21 KTLGLPVPDRDTLLPLLTAAARTPDHGKLEPWRFIVVQQAAMPKLANIAQQRGEALGLDAEQIKKGRGQFDQGALAVVVVEVQKPSPKIPPLEQTYSTGAVCLALLNAALAAGWGANWLSGWASHDREFMTQAFDLAPNERIAGIIHIGTETSAPPERPRPDINEMTTWLSD 192          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: nitroreductase (family protein n=1 Tax=Sulfitobacter noctilucae TaxID=1342302 RepID=UPI0004689D78)

HSP 1 Score: 275 bits (704), Expect = 2.610e-92
Identity = 138/172 (80.23%), Postives = 148/172 (86.05%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMSD 516
            KTL  PVP    L PLLTAAARTPDHGKLEPWRFIV+E  AMARLA++ +ARG ALGLD EQI KGR QFD GNLAVVVVEVQKPS KIPALEQTYSAGA CLALLNAALAAGWGANWLSGWASHDRGFME+   LAP E IAG+IHIGTET+ PPERPRPDI+ IT+W+SD
Sbjct:   21 KTLGQPVPDRLALEPLLTAAARTPDHGKLEPWRFIVVEKPAMARLADVAEARGVALGLDAEQIAKGRNQFDTGNLAVVVVEVQKPSAKIPALEQTYSAGAVCLALLNAALAAGWGANWLSGWASHDRGFMEEGLGLAPHECIAGLIHIGTETAAPPERPRPDIQGITTWLSD 192          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=9 Tax=Sulfitobacter TaxID=60136 RepID=A9DVF2_9RHOB)

HSP 1 Score: 273 bits (699), Expect = 1.410e-91
Identity = 134/170 (78.82%), Postives = 146/170 (85.88%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWM 510
            KTL LPVP    L PLLTAAARTPDHGKLEPWRF+V++  AM RLAE+ + RG ALGL PE I KGRGQFDQGNLAVVV+EVQKPS KIP LEQTYSAGA CLALLNAALAAGWGANWLSGW SHDRGFME+ F LAP ERIAGIIHIGTET+ PPERPRP+I+ IT+W+
Sbjct:   21 KTLCLPVPDAEALRPLLTAAARTPDHGKLEPWRFVVIDRTAMTRLAEVAEKRGAALGLAPEDIAKGRGQFDQGNLAVVVIEVQKPSPKIPPLEQTYSAGAVCLALLNAALAAGWGANWLSGWPSHDRGFMEEGFALAPHERIAGIIHIGTETTAPPERPRPNIDEITTWL 190          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=1 Tax=Sulfitobacter sabulilitoris TaxID=2562655 RepID=A0A5S3PBN0_9RHOB)

HSP 1 Score: 273 bits (698), Expect = 2.140e-91
Identity = 135/171 (78.95%), Postives = 148/171 (86.55%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMS 513
            KTL  PVPT A L+PLLTAAARTPDHGKLEPWRFIV+E +AM RLA + +ARG AL L+ EQI KGR QFDQG+LAV V+EVQKPS KIPALEQTYSAGA CLALLNAALAAGWGANWLSGW SHDRGFM  A  LAP ERIAG IHIGTETSQPP+RPRPDI++IT+W+S
Sbjct:   21 KTLAAPVPTRAALVPLLTAAARTPDHGKLEPWRFIVIETSAMPRLAAVAEARGIALNLEAEQIGKGRAQFDQGHLAVAVIEVQKPSAKIPALEQTYSAGAVCLALLNAALAAGWGANWLSGWPSHDRGFMTDALGLAPHERIAGFIHIGTETSQPPDRPRPDIDAITTWVS 191          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=3 Tax=Sulfitobacter geojensis TaxID=1342299 RepID=A0A196Q358_9RHOB)

HSP 1 Score: 273 bits (698), Expect = 2.140e-91
Identity = 133/170 (78.24%), Postives = 147/170 (86.47%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWM 510
            KTL LPVP    L PLL AAARTPDHGKLEPWRFIV+E  AM RLA+I ++RG ALGL+PEQ+ KGRGQFDQGNLAVVV+EVQKPS K+PALEQTYSAGA CLAL+N ALAAGWGANWLSGW SHDRGFM +AF LA  ERIAG+IHIGTETS PP+RPRPDI+ IT+WM
Sbjct:   21 KTLTLPVPDRDALQPLLIAAARTPDHGKLEPWRFIVIEKPAMPRLADIAESRGTALGLEPEQVAKGRGQFDQGNLAVVVIEVQKPSAKVPALEQTYSAGAVCLALVNVALAAGWGANWLSGWPSHDRGFMSEAFDLADHERIAGLIHIGTETSVPPDRPRPDIDQITTWM 190          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=6 Tax=Sulfitobacter mediterraneus TaxID=83219 RepID=A0A061ST13_9RHOB)

HSP 1 Score: 272 bits (696), Expect = 4.310e-91
Identity = 138/171 (80.70%), Postives = 145/171 (84.80%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMS 513
            KTL  PVP  A LIP LTAAAR+PDHGKLEPWRFIVLE  AMARLAE+VQ RG AL L  EQI KGR QFDQG LAVVVVEVQKPSEKIPALEQTY+AGA CLALLN ALAAGWGANWLSGW SHDRGFM+    LA  ERIAGIIHIGTETS PPERPRP+IESIT+W+S
Sbjct:   21 KTLAGPVPDRATLIPFLTAAARSPDHGKLEPWRFIVLETPAMARLAEVVQTRGAALALPEEQIVKGRSQFDQGGLAVVVVEVQKPSEKIPALEQTYAAGAVCLALLNVALAAGWGANWLSGWPSHDRGFMQDGLALADHERIAGIIHIGTETSAPPERPRPNIESITTWLS 191          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=1 Tax=Sulfitobacter sediminilitoris TaxID=2698830 RepID=A0A6P0CBU2_9RHOB)

HSP 1 Score: 271 bits (692), Expect = 1.750e-90
Identity = 135/172 (78.49%), Postives = 147/172 (85.47%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMSD 516
            KTL  PVP  A L PLLTAAARTPDHGKLEPWRFIV+E  AMARLA++VQ RGEALGL PEQI KGR QFDQG LAVVVVEVQKPSEKIP +EQ+YSAGA CL+LLNAALA+GWGANWLSGW SHDRGFM  A  LA  E IAGIIHIGTETS PPERPRP+++ IT+W+SD
Sbjct:   21 KTLGTPVPDRAALQPLLTAAARTPDHGKLEPWRFIVIEAPAMARLADVVQQRGEALGLAPEQIAKGRTQFDQGQLAVVVVEVQKPSEKIPPIEQSYSAGAVCLSLLNAALASGWGANWLSGWPSHDRGFMVDALGLAEHESIAGIIHIGTETSAPPERPRPNVQEITTWLSD 192          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=3 Tax=Roseobacter TaxID=2433 RepID=Q16B10_ROSDO)

HSP 1 Score: 270 bits (689), Expect = 5.020e-90
Identity = 133/172 (77.33%), Postives = 147/172 (85.47%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMSD 516
            KTL+ P P  A+L PLL AAARTPDHGKLEPWRFIV+E  AMARLAEI Q RGEALGLD +QITKGR QFDQG+LAV V+E  KPSEKIPALEQTYSAGA CLALLNAAL+AGWGANWLSGW SHDR FM +AF LA  ERIAG+IHI TETS PP+RPRPD+++ITSWM +
Sbjct:   21 KTLQAPAPDRAQLRPLLQAAARTPDHGKLEPWRFIVIEKPAMARLAEIAQRRGEALGLDADQITKGRSQFDQGHLAVAVIESPKPSEKIPALEQTYSAGAVCLALLNAALSAGWGANWLSGWPSHDRTFMREAFALADHERIAGLIHIATETSTPPDRPRPDLDTITSWMPE 192          
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Match: Putative (NAD(P)H nitroreductase n=1 Tax=Sulfitobacter brevis TaxID=74348 RepID=A0A1I1TQA0_9RHOB)

HSP 1 Score: 270 bits (689), Expect = 5.020e-90
Identity = 134/171 (78.36%), Postives = 145/171 (84.80%), Query Frame = 1
Query:    1 KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGAACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGTETSQPPERPRPDIESITSWMS 513
            KTL LPVP+   L+PLL AAARTPDHGKLEPWRFIVLE  A+ RL++ VQARGE L LDPEQ+ KGR QFDQG LAVVVVEVQKPSEKIPALEQTYSAGA C+ LLNAA AAGWGANWLSGW +HDRGFM +   LA  ERIAGIIHIGTET+ PPERPRPDIESIT+W S
Sbjct:   21 KTLGLPVPSREALMPLLIAAARTPDHGKLEPWRFIVLEKEALTRLSKTVQARGEGLALDPEQVEKGRSQFDQGQLAVVVVEVQKPSEKIPALEQTYSAGAVCIGLLNAAQAAGWGANWLSGWPAHDRGFMAEGLGLADHERIAGIIHIGTETAAPPERPRPDIESITTWQS 191          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74628.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative5.510e-9483.04NAD(P)H nitroreductase n=1 Tax=Sulfitobacter sp. T... [more]
Putative7.820e-9481.98NAD(P)H nitroreductase n=1 Tax=Sulfitobacter nocti... [more]
nitroreductase2.610e-9280.23family protein n=1 Tax=Sulfitobacter noctilucae Ta... [more]
Putative1.410e-9178.82NAD(P)H nitroreductase n=9 Tax=Sulfitobacter TaxID... [more]
Putative2.140e-9178.95NAD(P)H nitroreductase n=1 Tax=Sulfitobacter sabul... [more]
Putative2.140e-9178.24NAD(P)H nitroreductase n=3 Tax=Sulfitobacter geoje... [more]
Putative4.310e-9180.70NAD(P)H nitroreductase n=6 Tax=Sulfitobacter medit... [more]
Putative1.750e-9078.49NAD(P)H nitroreductase n=1 Tax=Sulfitobacter sedim... [more]
Putative5.020e-9077.33NAD(P)H nitroreductase n=3 Tax=Roseobacter TaxID=2... [more]
Putative5.020e-9078.36NAD(P)H nitroreductase n=1 Tax=Sulfitobacter brevi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74628contigH-canaliculatus_M_contigs74628:1..519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1342301.JASD01000008_gene1712
Preferred nameydjA
PFAMsNitroreductase
Model size519
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.28e-94
EggNOG OGsCOG0778@1|root,COG0778@2|Bacteria,1PKUV@1224|Proteobacteria,2U5MZ@28211|Alphaproteobacteria,3ZW5X@60136|Sulfitobacter
DescriptionNitroreductase family
Cds size519
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854083.9969285-CDS-H-canaliculatus_M_contigs74628:0..5191696854083.9969285-CDS-H-canaliculatus_M_contigs74628:0..519Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74628 1..519 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74628.1.1prot_H-canaliculatus_M_contigs74628.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs74628 1..519 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs74628.1.1

>prot_H-canaliculatus_M_contigs74628.1.1 ID=prot_H-canaliculatus_M_contigs74628.1.1|Name=mRNA_H-canaliculatus_M_contigs74628.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=173bp
KTLRLPVPTHAELIPLLTAAARTPDHGKLEPWRFIVLEGAAMARLAEIVQ
ARGEALGLDPEQITKGRGQFDQGNLAVVVVEVQKPSEKIPALEQTYSAGA
ACLALLNAALAAGWGANWLSGWASHDRGFMEQAFTLAPLERIAGIIHIGT
ETSQPPERPRPDIESITSWMSD*
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mRNA from alignment at H-canaliculatus_M_contigs74628:1..519+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs74628.1.1 ID=mRNA_H-canaliculatus_M_contigs74628.1.1|Name=mRNA_H-canaliculatus_M_contigs74628.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=519bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74628:1..519+ (Hapterophycus canaliculatus Oshoro7m male)
AAAACGCTTCGTCTACCGGTGCCTACACATGCAGAGCTGATACCGCTGTT GACCGCGGCTGCGCGTACTCCGGATCATGGCAAACTGGAACCCTGGCGAT TTATTGTGCTGGAAGGTGCCGCCATGGCACGGCTCGCGGAGATCGTCCAG GCGCGCGGAGAGGCCTTGGGACTAGACCCAGAGCAGATCACCAAAGGGCG GGGTCAGTTTGATCAGGGCAATCTCGCCGTAGTGGTGGTTGAGGTGCAAA AGCCATCCGAGAAAATCCCAGCGCTTGAGCAGACCTATTCGGCAGGTGCC GCATGCCTCGCCTTGCTTAATGCTGCGCTTGCCGCGGGCTGGGGGGCGAA TTGGCTCAGCGGTTGGGCGTCTCATGATCGCGGCTTTATGGAACAGGCGT TTACCCTTGCGCCACTTGAACGCATCGCAGGGATTATCCATATCGGGACC GAGACGTCGCAGCCACCAGAACGGCCGCGACCCGATATAGAAAGTATCAC ATCATGGATGTCGGACTGA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74628:1..519+

>mRNA_H-canaliculatus_M_contigs74628.1.1 ID=mRNA_H-canaliculatus_M_contigs74628.1.1|Name=mRNA_H-canaliculatus_M_contigs74628.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=519bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74628:1..519+ (Hapterophycus canaliculatus Oshoro7m male)
AAAACGCTTCGTCTACCGGTGCCTACACATGCAGAGCTGATACCGCTGTT
GACCGCGGCTGCGCGTACTCCGGATCATGGCAAACTGGAACCCTGGCGAT
TTATTGTGCTGGAAGGTGCCGCCATGGCACGGCTCGCGGAGATCGTCCAG
GCGCGCGGAGAGGCCTTGGGACTAGACCCAGAGCAGATCACCAAAGGGCG
GGGTCAGTTTGATCAGGGCAATCTCGCCGTAGTGGTGGTTGAGGTGCAAA
AGCCATCCGAGAAAATCCCAGCGCTTGAGCAGACCTATTCGGCAGGTGCC
GCATGCCTCGCCTTGCTTAATGCTGCGCTTGCCGCGGGCTGGGGGGCGAA
TTGGCTCAGCGGTTGGGCGTCTCATGATCGCGGCTTTATGGAACAGGCGT
TTACCCTTGCGCCACTTGAACGCATCGCAGGGATTATCCATATCGGGACC
GAGACGTCGCAGCCACCAGAACGGCCGCGACCCGATATAGAAAGTATCAC
ATCATGGATGTCGGACTGA
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