mRNA_H-canaliculatus_M_contigs746.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs746.1.1
Unique NamemRNA_H-canaliculatus_M_contigs746.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G776_ECTSI)

HSP 1 Score: 492 bits (1266), Expect = 1.360e-172
Identity = 235/323 (72.76%), Postives = 268/323 (82.97%), Query Frame = 1
Query:    1 NPGAKNLRTTWRIHPLGLSTVLEADCRFLEASVYQFLEWERSTELLPPS--NPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCEKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQGLNPDANEAASGDGDRDDGEARVLAGDAFSVRAMVDAVTAPDILQMIANRMLHRK 963
            NP  K LRTTWRIHPLG+STV EADC FLEASV QFLEWE+S E L     NPF  Y R  HW+YADYKH+KEL DDWAKALE ++DWS LGCEK A+DSTLW GTGGSHTPLH+DTYGVNLVAQLHGRKKWLL+PPA T +L+PTR+PYEESSVFSQ+DAR+PD+ RFP++ EA+ +AVTLEPGD+LFVPKHWWHFVEA +TSLSVNVWVD P+DSEDRAKESVARVLMTSLA GL+ EVGP WLNPTE  VWP+EETLAVASLAFQGLN    E +S   D ++G A   AG  FSVRAM DA+TAPD+LQM+  R+  ++
Sbjct:   46 NPRVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWSYADYKHLKELEDDWAKALEPIIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPGWLNPTEQAVWPIEETLAVASLAFQGLNAHPEEESS---DHENGAAGARAGGDFSVRAMADAITAPDVLQMVFERIAQKR 365          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C731_9STRA)

HSP 1 Score: 255 bits (651), Expect = 3.790e-80
Identity = 133/325 (40.92%), Postives = 193/325 (59.38%), Query Frame = 1
Query:   16 NLRTTWRIHPLGLSTVLEADCRFLE-ASVYQFLEWERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCEKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAV----TLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQGLNPDANEAASGDGDRDDGEARVLAGDA-----FSVRAMVDAVTAPDILQMIANRMLHR 960
            N+R+T+R+HP    TV E +C +++ A++  F EW    ++   +NPF  Y R   WAYADY H  E+  +  +A   ++DWS++G    A   T W G+ G+HTPLH+DTYG N+V QLHG K+W LFPP+AT  L PTR+P+EESSV+S +D     IR+   +    A A+     L PGD+LFVP+HWWHFVE   T++SVN+W+D PDD   R  E++ARV++TS+   LE+++G  WL+PTE E W  ++ + +  +A Q  +                     AGDA      S + ++DA+ AP  LQ IA ++  R
Sbjct:   15 NVRSTFRVHPRVPRTVREPECIYVQDATLNHFKEWVEGKQI-DDTNPFQRYDRNEFWAYADYMHFGEIFGERTEAAAALLDWSSIGIGD-APQPTFWLGSAGAHTPLHFDTYGTNVVVQLHGEKRWTLFPPSATELLKPTRIPFEESSVYSGLD-----IRQLDGHSATGAAALCQTAVLRPGDVLFVPRHWWHFVECTSTAMSVNLWMDHPDDPSARVTEALARVVVTSMQEALESQLGSEWLSPTEEE-WTPDQAMEMLQIAVQSQSS--------------------AGDAPPQPPASFQDVLDALLAPTTLQHIARQLTRR 311          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XGZ5_BRABE)

HSP 1 Score: 240 bits (613), Expect = 5.010e-74
Identity = 114/242 (47.11%), Postives = 157/242 (64.88%), Query Frame = 1
Query:   40 HPLGLSTVLEADCRFLEASVYQFLEWERSTELLPP------SNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
            +P     + E DC +++AS+YQF  W       PP      SNP  PY   N WAY DYK++ EL  D    LE V  W   G   ++  +ST+W G+ G+HTP HYDTYG NLV Q++GRKKW+LFPP  + SL PTR+PYEESSVFSQ++   P++ + P+   ++   V LEPGD+LFVPKHWWH+VE++ TS++VN W++   D+EDR +E+V R+++ S+ SG +      WLNPTE
Sbjct:   59 NPASKDVLWETDCEYIDASLYQFCLWLDPVSPHPPEDNSTDSNPLQPYNPDNTWAYLDYKYMAELFSDQPDILEAV-RWEDFGFPGRSGVESTIWVGSVGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPSLYPTRLPYEESSVFSQVNVAHPNVEQHPKVVNSHPYVVVLEPGDVLFVPKHWWHYVESLSTSIAVNSWIEMTSDAEDRLQEAVVRLVLLSIKSGSDQS---QWLNPTE 296          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03E596)

HSP 1 Score: 237 bits (605), Expect = 4.020e-72
Identity = 127/306 (41.50%), Postives = 185/306 (60.46%), Query Frame = 1
Query:   61 VLEADCRFLEASVYQFLEW-ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALET--VVDWSALGC-EKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLAS-GLETEVGPAWLNPT-EGEVWPLEETLAV---ASLAFQGLNPDANEAASGDGDRDDGEARVLAGDAFSVRAMVDAVTAPDILQMIANRM 951
            V+E +C ++ A++ +F +W     E LP +NPFA +++K++  YADYK++KEL   + K  E    VDWS LG  E+    S LWFGT  S TP HYD+YG NLVAQ++GRK+WLLFPP     L PTR+PYEESSVFSQ++ ++PD  ++P++  A A  V LEPG++LF+PKHWWH+VE +ETS+S+N W++   D  DR +ESV R ++ SL S   +T     W  P+   E    EE+L +   A +A+   N                E         SV   ++AV +PD++++I  ++
Sbjct:   99 VMETECDYVVATISEFYQWLSLDHEKLPNNNPFAQFLQKDYTCYADYKYMKEL---FVKCPEKHHEVDWSYLGFPERNGEHSALWFGTAESFTPCHYDSYGCNLVAQIYGRKRWLLFPPEQGEFLYPTRIPYEESSVFSQVNVKNPDTTKYPKFQHARAHEVILEPGNVLFIPKHWWHYVENLETSISINTWMEIDSDDYDRVEESVTRAIICSLRSKDNKTCRDKLWATPSMREEDLSFEESLRLCRKAVVAYYNRNTKRGN-----------EVEETRTKELSVEDFMNAVVSPDVVRIITEKI 390          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HS12_PARCT)

HSP 1 Score: 236 bits (603), Expect = 6.060e-72
Identity = 131/328 (39.94%), Postives = 193/328 (58.84%), Query Frame = 1
Query:   16 NLRTTWRIHPLGLST---------VLEADCRFLEASVYQFLEWERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPA----WLNPT-EGEVWPLEETLAVASLAFQGLNPDANEAASGDGDRDDGEARVLAGDAFSVRAMVDAVTAPDILQMIANRML 954
            N+RT +R  P   S+         V+E DC+F+E +   F EW    E   P+  F  + RK++  YADYK++K+L  +    ++ + +W+ LG   +T   ST W G+  S TP HYD+YG NLVAQL+G+KKWLLFPP  +  L PTR+PYEESSVFS ++ R PD  +FP ++ A    V LEPGDILFVPKHWWH+VE VET++SVN W++   D+ DR +E++ R L+  L    ET+VG      WLNP+   E     E++     A +  + +  +A   + + +  E + L  D F     ++ V + D+++MIA ++L
Sbjct:   63 NVRTRFRFCPRISSSEYCFPAKHAVMETDCQFMEGTFGDFHEWLTCDEAKSPNLAFGKFPRKDYSCYADYKYMKDLFVECPSKVQDI-NWACLGFPTRTGEQSTFWMGSDESFTPCHYDSYGCNLVAQLYGKKKWLLFPPTQSEYLHPTRIPYEESSVFSLVNIRDPDHEKFPNFEHATCYEVILEPGDILFVPKHWWHYVECVETAISVNTWIEMNTDNYDRIEEAITRTLINPLKLE-ETKVGACDQNVWLNPSMRKENLSFHESMNYLGQALRLYHLEQMKA---NNEVEQQENKELGADEF-----INTVVSTDVIRMIAQKLL 380          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z534_BRAFL)

HSP 1 Score: 231 bits (588), Expect = 3.310e-70
Identity = 110/247 (44.53%), Postives = 157/247 (63.56%), Query Frame = 1
Query:   40 HPLGLSTVLEADCRFLEASVYQFLEW-----------ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
            +P     + E DC +++A++ QF +W           E  T+    SNPF PY   + WAY DYK++ E+  D    L+ V  W   G   +T ++ST+W G+ G+HTP HYDTYG NLV Q++GRKKW+LFPP  +  L PTR+PYEESSVFSQ++   PD+   P+   ++   V LEPGD+LFVPKHWWH+VE++ TS++VN W++   D+EDR +E+V R+++ S+ S  +      WLNPTE
Sbjct:   62 NPASKDVLWEMDCEYIDATLQQFCDWLDPVSSPAPREECVTDNKEDSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQGV-RWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPKLYPTRLPYEESSVFSQVNVAHPDVEEHPKVMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKSDSDQS---QWLNPTE 304          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8A80B)

HSP 1 Score: 236 bits (602), Expect = 4.660e-70
Identity = 118/236 (50.00%), Postives = 155/236 (65.68%), Query Frame = 1
Query:   55 STVLEADCRFLEASVYQFLEWERSTELLPPS-----NPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
            S + E DC   EA++ QF EW RS      S     NP   Y R++HW Y DYK +  + +D    L+ V  WS LG E +    STLW G+ G+ TP HYDTYG NLVAQ++GRK+W LFPP+ T  L PTR+PYEESSVFS ++  +P + R+P++ EA    VTLEPG++LFVPKHWWHFVE++ETS+S+N WVD   D E R +E+V RVL++SL S     +   W+NP+E
Sbjct:   63 SVLWEVDCTHEEATLGQFCEWLRSDAPTTCSAQTSQNPLLKYKRQDHWCYVDYKQMAFMFEDHPDILQAV-RWSDLGFEDRDGRQSTLWIGSAGAFTPGHYDTYGFNLVAQIYGRKRWHLFPPSQTHLLYPTRIPYEESSVFSPVNIANPALDRYPKFVEATPYVVTLEPGEVLFVPKHWWHFVESLETSISINTWVDVESDKESRIQEAVTRVLISSLMSTSCDSM--KWVNPSE 295          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603A1F7)

HSP 1 Score: 236 bits (601), Expect = 5.330e-70
Identity = 114/247 (46.15%), Postives = 163/247 (65.99%), Query Frame = 1
Query:   40 HPLGLSTVLEADCRFLEASVYQFLEW-----------ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
            +P     + E DC +++A++ QF EW           E  T+    SNPF PY   + WAY DYK++ E+  D    L+ V  W   G   +T ++ST+W G+ G+HTP HYDTYG NLV Q++GRKKW+LFPP  +A+L PTR+PYEESSVFSQ++   PDI++ P+   ++   V LEPGD+LFVPKHWWH+VE++ TS++VN W++   D+EDR +E+V R+++ S+ S  + +  P WLNPTE
Sbjct:   62 NPASKDVLWETDCEYIDATLQQFCEWLDPVSSPAPREECVTDNKENSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQGV-RWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSANLYPTRLPYEESSVFSQVNVAHPDIQQHPKLMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKS--DADQSP-WLNPTE 304          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1 homolog n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001897E653)

HSP 1 Score: 232 bits (591), Expect = 2.680e-69
Identity = 118/265 (44.53%), Postives = 161/265 (60.75%), Query Frame = 1
Query:   61 VLEADCRFLEASVYQFLEWERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVET-SLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQG-------LNPDANEAA 828
            + E  C ++EA+V QFL W R    +    PF+ Y    +WAYADYK++  L  D     E V  WS  G E +   +STLW GT G++TP H DTYG NLV Q+ GRK+W LFPP  T++L PTR+PYEESS+FSQ+D   PD++RFP +  A A  VTL+PG +LFVP+HWWH+VE+V+  ++SVN W++   D   R  E+V + ++ +L S    +    WLNPTE E     E++   +LA  G       L+PD   AA
Sbjct:   68 LFETQCSYIEATVAQFLHWTRGRTDV---GPFSEYSYSEYWAYADYKYIAMLFQDQPFMFEDV-KWSQFGFEGRDGKESTLWIGTEGANTPCHLDTYGFNLVLQVQGRKRWHLFPPDDTSNLYPTRIPYEESSIFSQVDVLRPDLKRFPEFQRARAHIVTLQPGQVLFVPRHWWHYVESVDPLTVSVNTWIELEVDDVARVTEAVTKTVVCALKSAQSDDNTDNWLNPTEEERASHSESMRYLNLAVSGCAHRKRSLSPDKPRAA 328          
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC150)

HSP 1 Score: 231 bits (589), Expect = 3.910e-69
Identity = 108/261 (41.38%), Postives = 164/261 (62.84%), Query Frame = 1
Query:   67 EADCRFLEASVYQFLEW-ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALG-CEKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQGLNPDANEAASGDGD 843
            E DC +  A++Y + EW  + +E L   NP   +   ++W YADYK++  +  D    L++V  WS  G  ++  ++ST+W G+ GSHTP H+DTYG NLVAQ+HG+KKW LF P  TA L PTR+PYEESSVFS ++  +PD+++ P + +A    +TL+PGD+L+VP+HWWHFVE +  ++S+N W++   D++ R +ES+ R++  ++ S   T  G +WLNPTE    P E  L     A + ++    E   G G+
Sbjct:   76 ERDCMYRNATLYCYNEWLNKDSEQLSEDNPLKEFPSTDYWCYADYKYMAHVFQDRTDILKSV-KWSNFGFADRDGTESTIWIGSEGSHTPCHFDTYGCNLVAQIHGKKKWSLFAPHQTAMLYPTRIPYEESSVFSHVNITNPDLKKHPCFQDATPYVITLQPGDVLYVPRHWWHFVECLTPAISINTWIELNVDNQARLEESIVRLITCNMMSSKNTNDG-SWLNPTEEMTSP-EVNLEYLKAAMKSVDEKNTEQNQGQGE 333          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
JmjC1.360e-17272.76domain-containing protein n=1 Tax=Ectocarpus silic... [more]
JmjC3.790e-8040.92domain-containing protein n=1 Tax=Tribonema minus ... [more]
HSPB1-associated5.010e-7447.11protein 1-like n=1 Tax=Branchiostoma belcheri TaxI... [more]
HSPB1-associated4.020e-7241.50protein 1-like isoform X1 n=2 Tax=Xenia sp. Carneg... [more]
JmjC6.060e-7239.94domain-containing protein n=1 Tax=Paramuricea clav... [more]
JmjC3.310e-7044.53domain-containing protein n=1 Tax=Branchiostoma fl... [more]
HSPB1-associated4.660e-7050.00protein 1-like n=1 Tax=Patiria miniata TaxID=46514... [more]
HSPB1-associated5.330e-7046.15protein 1-like n=1 Tax=Branchiostoma floridae TaxI... [more]
HSPB1-associated2.680e-6944.53protein 1 homolog n=1 Tax=Nematolebias whitei TaxI... [more]
HSPB1-associated3.910e-6941.38protein 1 homolog n=1 Tax=Saccoglossus kowalevskii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs746contigH-canaliculatus_M_contigs746:1930..4225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G776
Preferred nameHSPBAP1
PFAMsCupin_8
Model size969
Max annot lvl2759|Eukaryota
KEGG koko:K19375
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons7
Evalue2.23e-173
EggNOG OGsKOG2132@1|root,KOG2132@2759|Eukaryota
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-01_010780.1
DescriptiontRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
Cds size969
COG categoryIQ
BRITEko00000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs746.1.1prot_H-canaliculatus_M_contigs746.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs746 1930..4225 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854083.34464-CDS-H-canaliculatus_M_contigs746:1929..20991696854083.34464-CDS-H-canaliculatus_M_contigs746:1929..2099Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs746 1930..2099 +
1696854083.3600829-CDS-H-canaliculatus_M_contigs746:2306..23461696854083.3600829-CDS-H-canaliculatus_M_contigs746:2306..2346Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs746 2307..2346 +
1696854083.3709123-CDS-H-canaliculatus_M_contigs746:2584..27341696854083.3709123-CDS-H-canaliculatus_M_contigs746:2584..2734Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs746 2585..2734 +
1696854083.3823721-CDS-H-canaliculatus_M_contigs746:2924..30611696854083.3823721-CDS-H-canaliculatus_M_contigs746:2924..3061Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs746 2925..3061 +
1696854083.394353-CDS-H-canaliculatus_M_contigs746:3277..34941696854083.394353-CDS-H-canaliculatus_M_contigs746:3277..3494Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs746 3278..3494 +
1696854083.406093-CDS-H-canaliculatus_M_contigs746:3724..38601696854083.406093-CDS-H-canaliculatus_M_contigs746:3724..3860Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs746 3725..3860 +
1696854083.4265556-CDS-H-canaliculatus_M_contigs746:4106..42251696854083.4265556-CDS-H-canaliculatus_M_contigs746:4106..4225Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs746 4107..4225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs746.1.1

>prot_H-canaliculatus_M_contigs746.1.1 ID=prot_H-canaliculatus_M_contigs746.1.1|Name=mRNA_H-canaliculatus_M_contigs746.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=323bp
NPGAKNLRTTWRIHPLGLSTVLEADCRFLEASVYQFLEWERSTELLPPSN
PFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCEKTASDSTL
WFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEE
SSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVE
TSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGE
VWPLEETLAVASLAFQGLNPDANEAASGDGDRDDGEARVLAGDAFSVRAM
VDAVTAPDILQMIANRMLHRKG*
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mRNA from alignment at H-canaliculatus_M_contigs746:1930..4225+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs746.1.1 ID=mRNA_H-canaliculatus_M_contigs746.1.1|Name=mRNA_H-canaliculatus_M_contigs746.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2296bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs746:1930..4225+ (Hapterophycus canaliculatus Oshoro7m male)
AACCCTGGCGCCAAAAACCTACGAACCACGTGGAGGATTCATCCGCTGGG TCTGAGCACTGTTTTGGAGGCGGACTGCCGCTTCCTCGAGGCTTCTGTGT ACCAATTCCTCGAGTGGGAGAGGTCCACCGAACTTTTGCCTCCATCCAAC CCCTTTGCACCATATGTCCGGTGAGTCATCGTTAACCAGACCCCTTCCTT TGTCCAGCGTCTCTGTGTGTCTTCTTTGTGATTCACGAGATATGCGAAGC CCTCATTCGTAACAAAACGCTGAAGTATTTATCCTGGAGCAAGGAACGTT GCTCGACCATCATCTCTGCTCACGAGTAGTTACAAGTACCGTTTCTGCGT TTTTCGCCCGGCGTTCTTCCATCGCAGGAAAAATCACTGGGCCTATGCTG ACTACAAGCACGTCAAGGTAAGGAGCATGTCCATTTGCTCTAACCATCGA CGATAAAACCAATAACAGTTTGCAGGTGGGTAGCCATCAGCTTTTGTCAC ACAAATATTTGAGACAGAAAAGATGGATGCGCAGCTCCAGGTGGGGTTCT CCTCGAAATAAAAAGGGGCCACGACTAGTGGGCATAAGCACCGCTTGAAA GCTCGAAACATTTATGCTACATGGAGCACCCGACAACTCTATTTTTCCTC CCAAGGAGCTCGGAGATGATTGGGCGAAAGCACTGGAGACGGTCGTTGAT TGGTCTGCGCTTGGCTGTGAAAAGACTGCGTCAGACTCCACGCTGTGGTT TGGCACCGGGGGTTCTCATACACCGCTTCACTACGATACGTACGGTGTCA ATCTGGTGAGATTTGTTTGATCGCCCTTCTATCTTCCAGTAGTCTAGGAC TCAAGATACCGCGGGTGGACGAACCGTGCTTTTCGGCCGCACACGTTTGC GGACGTTGGGCGTTTGGGGTCGACTTGCAAGGATCTGCGCCGCATTTCCT GGTCTGTCTCAGAAAGCGCGCCGCGATCATTATCACTATTAATAGGTGGC CCAACTGCACGGCAGAAAGAAGTGGTTACTCTTCCCTCCAGCTGCCACGG CCAGCCTTTCCCCGACGCGGGTGCCCTACGAAGAGAGCAGCGTCTTCAGC CAGATAGACGCGAGATCGCCGGACATTCGCAGGTGAGTGTGCGTCGCCGC TTGCACCAAAGTCTTCCTCGGGGTTGCGGTCATCAGGGTGTAGGAAATCT TTCTGCGGCGGTTATCTCCACCGCGAGGCCCTTGGCCCTTGTCGTGGGTA CTCGCAGCCTTTCGAGAGCGCGAGCATTCGAATTTCATGTGACGCGCTTC CTCACTGCCATCGCGGCGCGTGCATACAACCCCGCGCGCCATTAATAGGT TTCCCCGCTACGACGAGGCAAATGCCGTGGCGGTGACTCTTGAACCCGGG GATATTCTCTTCGTACCCAAGCACTGGTGGCATTTCGTGGAAGCAGTAGA AACTTCGTTGAGCGTCAACGTTTGGGTCGACGCTCCTGACGACTCGGAAG ACCGCGCAAAGGAGAGCGTCGCGCGCGTCCTCATGACGTCCCTCGCCAGC GGGCTCGAGACAGAGGTAATTGAGTCTTCGGTGAAGGCTGCTGCTGCTTT CGAGGACTCTCGCCAGGGCGCGTCTGCATGTGCCAGACGCCATCGACGGC TTCTCTCGTTGCCGTTCCTTAGGGATTGACCCGCGCGGCCTGGTCAACAC GCGTCGAGCGCACTCCCTGCATGCACCCGAGCAATCTAGATGTACCTACG TTTGTACCGATCTGCTCTCCCGAAATGTACCCCACGTCTATTAAGGTGGG TCCGGCGTGGCTCAATCCTACTGAGGGAGAGGTGTGGCCTCTCGAGGAGA CGTTGGCCGTGGCCAGCCTTGCATTCCAAGGGCTGAATCCTGACGCGAAT GAAGCTGCAAGTGGTGATGGTGACCGGGATGGTGAGTTATTCTTCAGACG CATATCGTTGTCAAGCGGTTGGATACGTTTCGCCGATTTTGGGCATCACG CCGATGTTGAAGACCTCCCATCCAGTATGTTTCATCACATTTGTGTCCTG CTTGCGGGTGTGTGCGTCCGACAAATCCAGTGAAAGAGGAGAGTCACCTG TGAGTTACAGTGCAAATTATGCAAGCCATGCCCGCTAAGGAAACAAAAAA ATGTGTCCCCGTACGTTTGATCGGCAGATGGCGAGGCGAGAGTTTTGGCA GGGGATGCCTTCTCTGTGAGGGCAATGGTGGACGCTGTTACAGCGCCGGA TATTCTGCAAATGATCGCAAATCGGATGTTGCATAGAAAAGGCTAG
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs746:1930..4225+

>mRNA_H-canaliculatus_M_contigs746.1.1 ID=mRNA_H-canaliculatus_M_contigs746.1.1|Name=mRNA_H-canaliculatus_M_contigs746.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=969bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs746:1930..4225+ (Hapterophycus canaliculatus Oshoro7m male)
AACCCTGGCGCCAAAAACCTACGAACCACGTGGAGGATTCATCCGCTGGG
TCTGAGCACTGTTTTGGAGGCGGACTGCCGCTTCCTCGAGGCTTCTGTGT
ACCAATTCCTCGAGTGGGAGAGGTCCACCGAACTTTTGCCTCCATCCAAC
CCCTTTGCACCATATGTCCGGAAAAATCACTGGGCCTATGCTGACTACAA
GCACGTCAAGGAGCTCGGAGATGATTGGGCGAAAGCACTGGAGACGGTCG
TTGATTGGTCTGCGCTTGGCTGTGAAAAGACTGCGTCAGACTCCACGCTG
TGGTTTGGCACCGGGGGTTCTCATACACCGCTTCACTACGATACGTACGG
TGTCAATCTGGTGGCCCAACTGCACGGCAGAAAGAAGTGGTTACTCTTCC
CTCCAGCTGCCACGGCCAGCCTTTCCCCGACGCGGGTGCCCTACGAAGAG
AGCAGCGTCTTCAGCCAGATAGACGCGAGATCGCCGGACATTCGCAGGTT
TCCCCGCTACGACGAGGCAAATGCCGTGGCGGTGACTCTTGAACCCGGGG
ATATTCTCTTCGTACCCAAGCACTGGTGGCATTTCGTGGAAGCAGTAGAA
ACTTCGTTGAGCGTCAACGTTTGGGTCGACGCTCCTGACGACTCGGAAGA
CCGCGCAAAGGAGAGCGTCGCGCGCGTCCTCATGACGTCCCTCGCCAGCG
GGCTCGAGACAGAGGTGGGTCCGGCGTGGCTCAATCCTACTGAGGGAGAG
GTGTGGCCTCTCGAGGAGACGTTGGCCGTGGCCAGCCTTGCATTCCAAGG
GCTGAATCCTGACGCGAATGAAGCTGCAAGTGGTGATGGTGACCGGGATG
ATGGCGAGGCGAGAGTTTTGGCAGGGGATGCCTTCTCTGTGAGGGCAATG
GTGGACGCTGTTACAGCGCCGGATATTCTGCAAATGATCGCAAATCGGAT
GTTGCATAGAAAAGGCTAG
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