mRNA_H-canaliculatus_M_contigs746.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G776_ECTSI) HSP 1 Score: 492 bits (1266), Expect = 1.360e-172 Identity = 235/323 (72.76%), Postives = 268/323 (82.97%), Query Frame = 1
Query: 1 NPGAKNLRTTWRIHPLGLSTVLEADCRFLEASVYQFLEWERSTELLPPS--NPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCEKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQGLNPDANEAASGDGDRDDGEARVLAGDAFSVRAMVDAVTAPDILQMIANRMLHRK 963
NP K LRTTWRIHPLG+STV EADC FLEASV QFLEWE+S E L NPF Y R HW+YADYKH+KEL DDWAKALE ++DWS LGCEK A+DSTLW GTGGSHTPLH+DTYGVNLVAQLHGRKKWLL+PPA T +L+PTR+PYEESSVFSQ+DAR+PD+ RFP++ EA+ +AVTLEPGD+LFVPKHWWHFVEA +TSLSVNVWVD P+DSEDRAKESVARVLMTSLA GL+ EVGP WLNPTE VWP+EETLAVASLAFQGLN E +S D ++G A AG FSVRAM DA+TAPD+LQM+ R+ ++
Sbjct: 46 NPRVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWSYADYKHLKELEDDWAKALEPIIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPGWLNPTEQAVWPIEETLAVASLAFQGLNAHPEEESS---DHENGAAGARAGGDFSVRAMADAITAPDVLQMVFERIAQKR 365
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C731_9STRA) HSP 1 Score: 255 bits (651), Expect = 3.790e-80 Identity = 133/325 (40.92%), Postives = 193/325 (59.38%), Query Frame = 1
Query: 16 NLRTTWRIHPLGLSTVLEADCRFLE-ASVYQFLEWERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCEKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAV----TLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQGLNPDANEAASGDGDRDDGEARVLAGDA-----FSVRAMVDAVTAPDILQMIANRMLHR 960
N+R+T+R+HP TV E +C +++ A++ F EW ++ +NPF Y R WAYADY H E+ + +A ++DWS++G A T W G+ G+HTPLH+DTYG N+V QLHG K+W LFPP+AT L PTR+P+EESSV+S +D IR+ + A A+ L PGD+LFVP+HWWHFVE T++SVN+W+D PDD R E++ARV++TS+ LE+++G WL+PTE E W ++ + + +A Q + AGDA S + ++DA+ AP LQ IA ++ R
Sbjct: 15 NVRSTFRVHPRVPRTVREPECIYVQDATLNHFKEWVEGKQI-DDTNPFQRYDRNEFWAYADYMHFGEIFGERTEAAAALLDWSSIGIGD-APQPTFWLGSAGAHTPLHFDTYGTNVVVQLHGEKRWTLFPPSATELLKPTRIPFEESSVYSGLD-----IRQLDGHSATGAAALCQTAVLRPGDVLFVPRHWWHFVECTSTAMSVNLWMDHPDDPSARVTEALARVVVTSMQEALESQLGSEWLSPTEEE-WTPDQAMEMLQIAVQSQSS--------------------AGDAPPQPPASFQDVLDALLAPTTLQHIARQLTRR 311
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XGZ5_BRABE) HSP 1 Score: 240 bits (613), Expect = 5.010e-74 Identity = 114/242 (47.11%), Postives = 157/242 (64.88%), Query Frame = 1
Query: 40 HPLGLSTVLEADCRFLEASVYQFLEWERSTELLPP------SNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
+P + E DC +++AS+YQF W PP SNP PY N WAY DYK++ EL D LE V W G ++ +ST+W G+ G+HTP HYDTYG NLV Q++GRKKW+LFPP + SL PTR+PYEESSVFSQ++ P++ + P+ ++ V LEPGD+LFVPKHWWH+VE++ TS++VN W++ D+EDR +E+V R+++ S+ SG + WLNPTE
Sbjct: 59 NPASKDVLWETDCEYIDASLYQFCLWLDPVSPHPPEDNSTDSNPLQPYNPDNTWAYLDYKYMAELFSDQPDILEAV-RWEDFGFPGRSGVESTIWVGSVGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPSLYPTRLPYEESSVFSQVNVAHPNVEQHPKVVNSHPYVVVLEPGDVLFVPKHWWHYVESLSTSIAVNSWIEMTSDAEDRLQEAVVRLVLLSIKSGSDQS---QWLNPTE 296
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03E596) HSP 1 Score: 237 bits (605), Expect = 4.020e-72 Identity = 127/306 (41.50%), Postives = 185/306 (60.46%), Query Frame = 1
Query: 61 VLEADCRFLEASVYQFLEW-ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALET--VVDWSALGC-EKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLAS-GLETEVGPAWLNPT-EGEVWPLEETLAV---ASLAFQGLNPDANEAASGDGDRDDGEARVLAGDAFSVRAMVDAVTAPDILQMIANRM 951
V+E +C ++ A++ +F +W E LP +NPFA +++K++ YADYK++KEL + K E VDWS LG E+ S LWFGT S TP HYD+YG NLVAQ++GRK+WLLFPP L PTR+PYEESSVFSQ++ ++PD ++P++ A A V LEPG++LF+PKHWWH+VE +ETS+S+N W++ D DR +ESV R ++ SL S +T W P+ E EE+L + A +A+ N E SV ++AV +PD++++I ++
Sbjct: 99 VMETECDYVVATISEFYQWLSLDHEKLPNNNPFAQFLQKDYTCYADYKYMKEL---FVKCPEKHHEVDWSYLGFPERNGEHSALWFGTAESFTPCHYDSYGCNLVAQIYGRKRWLLFPPEQGEFLYPTRIPYEESSVFSQVNVKNPDTTKYPKFQHARAHEVILEPGNVLFIPKHWWHYVENLETSISINTWMEIDSDDYDRVEESVTRAIICSLRSKDNKTCRDKLWATPSMREEDLSFEESLRLCRKAVVAYYNRNTKRGN-----------EVEETRTKELSVEDFMNAVVSPDVVRIITEKI 390
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HS12_PARCT) HSP 1 Score: 236 bits (603), Expect = 6.060e-72 Identity = 131/328 (39.94%), Postives = 193/328 (58.84%), Query Frame = 1
Query: 16 NLRTTWRIHPLGLST---------VLEADCRFLEASVYQFLEWERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPA----WLNPT-EGEVWPLEETLAVASLAFQGLNPDANEAASGDGDRDDGEARVLAGDAFSVRAMVDAVTAPDILQMIANRML 954
N+RT +R P S+ V+E DC+F+E + F EW E P+ F + RK++ YADYK++K+L + ++ + +W+ LG +T ST W G+ S TP HYD+YG NLVAQL+G+KKWLLFPP + L PTR+PYEESSVFS ++ R PD +FP ++ A V LEPGDILFVPKHWWH+VE VET++SVN W++ D+ DR +E++ R L+ L ET+VG WLNP+ E E++ A + + + +A + + + E + L D F ++ V + D+++MIA ++L
Sbjct: 63 NVRTRFRFCPRISSSEYCFPAKHAVMETDCQFMEGTFGDFHEWLTCDEAKSPNLAFGKFPRKDYSCYADYKYMKDLFVECPSKVQDI-NWACLGFPTRTGEQSTFWMGSDESFTPCHYDSYGCNLVAQLYGKKKWLLFPPTQSEYLHPTRIPYEESSVFSLVNIRDPDHEKFPNFEHATCYEVILEPGDILFVPKHWWHYVECVETAISVNTWIEMNTDNYDRIEEAITRTLINPLKLE-ETKVGACDQNVWLNPSMRKENLSFHESMNYLGQALRLYHLEQMKA---NNEVEQQENKELGADEF-----INTVVSTDVIRMIAQKLL 380
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: JmjC (domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z534_BRAFL) HSP 1 Score: 231 bits (588), Expect = 3.310e-70 Identity = 110/247 (44.53%), Postives = 157/247 (63.56%), Query Frame = 1
Query: 40 HPLGLSTVLEADCRFLEASVYQFLEW-----------ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
+P + E DC +++A++ QF +W E T+ SNPF PY + WAY DYK++ E+ D L+ V W G +T ++ST+W G+ G+HTP HYDTYG NLV Q++GRKKW+LFPP + L PTR+PYEESSVFSQ++ PD+ P+ ++ V LEPGD+LFVPKHWWH+VE++ TS++VN W++ D+EDR +E+V R+++ S+ S + WLNPTE
Sbjct: 62 NPASKDVLWEMDCEYIDATLQQFCDWLDPVSSPAPREECVTDNKEDSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQGV-RWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPKLYPTRLPYEESSVFSQVNVAHPDVEEHPKVMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKSDSDQS---QWLNPTE 304
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8A80B) HSP 1 Score: 236 bits (602), Expect = 4.660e-70 Identity = 118/236 (50.00%), Postives = 155/236 (65.68%), Query Frame = 1
Query: 55 STVLEADCRFLEASVYQFLEWERSTELLPPS-----NPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
S + E DC EA++ QF EW RS S NP Y R++HW Y DYK + + +D L+ V WS LG E + STLW G+ G+ TP HYDTYG NLVAQ++GRK+W LFPP+ T L PTR+PYEESSVFS ++ +P + R+P++ EA VTLEPG++LFVPKHWWHFVE++ETS+S+N WVD D E R +E+V RVL++SL S + W+NP+E
Sbjct: 63 SVLWEVDCTHEEATLGQFCEWLRSDAPTTCSAQTSQNPLLKYKRQDHWCYVDYKQMAFMFEDHPDILQAV-RWSDLGFEDRDGRQSTLWIGSAGAFTPGHYDTYGFNLVAQIYGRKRWHLFPPSQTHLLYPTRIPYEESSVFSPVNIANPALDRYPKFVEATPYVVTLEPGEVLFVPKHWWHFVESLETSISINTWVDVESDKESRIQEAVTRVLISSLMSTSCDSM--KWVNPSE 295
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603A1F7) HSP 1 Score: 236 bits (601), Expect = 5.330e-70 Identity = 114/247 (46.15%), Postives = 163/247 (65.99%), Query Frame = 1
Query: 40 HPLGLSTVLEADCRFLEASVYQFLEW-----------ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTE 744
+P + E DC +++A++ QF EW E T+ SNPF PY + WAY DYK++ E+ D L+ V W G +T ++ST+W G+ G+HTP HYDTYG NLV Q++GRKKW+LFPP +A+L PTR+PYEESSVFSQ++ PDI++ P+ ++ V LEPGD+LFVPKHWWH+VE++ TS++VN W++ D+EDR +E+V R+++ S+ S + + P WLNPTE
Sbjct: 62 NPASKDVLWETDCEYIDATLQQFCEWLDPVSSPAPREECVTDNKENSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQGV-RWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSANLYPTRLPYEESSVFSQVNVAHPDIQQHPKLMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKS--DADQSP-WLNPTE 304
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1 homolog n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI001897E653) HSP 1 Score: 232 bits (591), Expect = 2.680e-69 Identity = 118/265 (44.53%), Postives = 161/265 (60.75%), Query Frame = 1
Query: 61 VLEADCRFLEASVYQFLEWERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALGCE-KTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVET-SLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQG-------LNPDANEAA 828
+ E C ++EA+V QFL W R + PF+ Y +WAYADYK++ L D E V WS G E + +STLW GT G++TP H DTYG NLV Q+ GRK+W LFPP T++L PTR+PYEESS+FSQ+D PD++RFP + A A VTL+PG +LFVP+HWWH+VE+V+ ++SVN W++ D R E+V + ++ +L S + WLNPTE E E++ +LA G L+PD AA
Sbjct: 68 LFETQCSYIEATVAQFLHWTRGRTDV---GPFSEYSYSEYWAYADYKYIAMLFQDQPFMFEDV-KWSQFGFEGRDGKESTLWIGTEGANTPCHLDTYGFNLVLQVQGRKRWHLFPPDDTSNLYPTRIPYEESSIFSQVDVLRPDLKRFPEFQRARAHIVTLQPGQVLFVPRHWWHYVESVDPLTVSVNTWIELEVDDVARVTEAVTKTVVCALKSAQSDDNTDNWLNPTEEERASHSESMRYLNLAVSGCAHRKRSLSPDKPRAA 328
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Match: HSPB1-associated (protein 1 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC150) HSP 1 Score: 231 bits (589), Expect = 3.910e-69 Identity = 108/261 (41.38%), Postives = 164/261 (62.84%), Query Frame = 1
Query: 67 EADCRFLEASVYQFLEW-ERSTELLPPSNPFAPYVRKNHWAYADYKHVKELGDDWAKALETVVDWSALG-CEKTASDSTLWFGTGGSHTPLHYDTYGVNLVAQLHGRKKWLLFPPAATASLSPTRVPYEESSVFSQIDARSPDIRRFPRYDEANAVAVTLEPGDILFVPKHWWHFVEAVETSLSVNVWVDAPDDSEDRAKESVARVLMTSLASGLETEVGPAWLNPTEGEVWPLEETLAVASLAFQGLNPDANEAASGDGD 843
E DC + A++Y + EW + +E L NP + ++W YADYK++ + D L++V WS G ++ ++ST+W G+ GSHTP H+DTYG NLVAQ+HG+KKW LF P TA L PTR+PYEESSVFS ++ +PD+++ P + +A +TL+PGD+L+VP+HWWHFVE + ++S+N W++ D++ R +ES+ R++ ++ S T G +WLNPTE P E L A + ++ E G G+
Sbjct: 76 ERDCMYRNATLYCYNEWLNKDSEQLSEDNPLKEFPSTDYWCYADYKYMAHVFQDRTDILKSV-KWSNFGFADRDGTESTIWIGSEGSHTPCHFDTYGCNLVAQIHGKKKWSLFAPHQTAMLYPTRIPYEESSVFSHVNITNPDLKKHPCFQDATPYVITLQPGDVLYVPRHWWHFVECLTPAISINTWIELNVDNQARLEESIVRLITCNMMSSKNTNDG-SWLNPTEEMTSP-EVNLEYLKAAMKSVDEKNTEQNQGQGE 333 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs746.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs746.1.1 >prot_H-canaliculatus_M_contigs746.1.1 ID=prot_H-canaliculatus_M_contigs746.1.1|Name=mRNA_H-canaliculatus_M_contigs746.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=323bp NPGAKNLRTTWRIHPLGLSTVLEADCRFLEASVYQFLEWERSTELLPPSNback to top mRNA from alignment at H-canaliculatus_M_contigs746:1930..4225+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs746.1.1 ID=mRNA_H-canaliculatus_M_contigs746.1.1|Name=mRNA_H-canaliculatus_M_contigs746.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2296bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs746:1930..4225+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs746:1930..4225+ >mRNA_H-canaliculatus_M_contigs746.1.1 ID=mRNA_H-canaliculatus_M_contigs746.1.1|Name=mRNA_H-canaliculatus_M_contigs746.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=969bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs746:1930..4225+ (Hapterophycus canaliculatus Oshoro7m male)back to top |