mRNA_H-canaliculatus_M_contigs74528.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGX1_ECTSI) HSP 1 Score: 219 bits (558), Expect = 2.750e-65 Identity = 105/108 (97.22%), Postives = 106/108 (98.15%), Query Frame = 1
Query: 1 QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
QAQKDNYLPRLG GELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKG GNEGIT+CLLERGHPGLRLGDRHDP
Sbjct: 192 QAQKDNYLPRLGRGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGNGNEGITVCLLERGHPGLRLGDRHDP 299
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS3_9STRA) HSP 1 Score: 174 bits (442), Expect = 7.710e-49 Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = 1
Query: 4 AQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
AQKD YLPRL GELIPCFGLT +SGSDAASMRD G V ENGV+GVRA FKKRYITLAP+AG+VGLAFNL+DP+ LL G G EGI++ LLERGHPGLR+GDRHDP
Sbjct: 181 AQKDYYLPRLARGELIPCFGLTAAASGSDAASMRDTGTVVRENGVLGVRANFKKRYITLAPIAGVVGLAFNLRDPSRLLGGVGAEGISVVLLERGHPGLRIGDRHDP 287
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNX9_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.790e-47 Identity = 82/108 (75.93%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
+A+KD YLP+L +GELIPCFGLTGP+SGSDAA+MRD V EENG +GVRATFKKRYITLAPVAG VGLA LKDPN LLKGKG EGI++ LLER PGLR+G RHDP
Sbjct: 184 EAEKDYYLPKLATGELIPCFGLTGPASGSDAAAMRDQAIVVEENGQLGVRATFKKRYITLAPVAGCVGLAVQLKDPNGLLKGKGKEGISIFLLERDLPGLRMGPRHDP 291
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDN3_DIALT) HSP 1 Score: 169 bits (427), Expect = 9.060e-47 Identity = 78/108 (72.22%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 1 QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
+ Q++ YLP+L SGE+IPCFGLTGP+SGSDAASMRD G V E++GV+GV TF KRYITLAPVA +VGLAFNL+DPN LLKGKG+EGIT+ LLER H GL +G RHDP
Sbjct: 168 ETQREYYLPKLASGEMIPCFGLTGPASGSDAASMRDTGIVVEKDGVLGVSVTFNKRYITLAPVAHVVGLAFNLQDPNGLLKGKGSEGITIALLERAHEGLNIGRRHDP 275
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSL9_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.430e-46 Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 1
Query: 1 QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
+ QK+ +LP+L SGELIPCFGLTGP SGSDAASM D G V ENGV+GVRATFKKRYITLAPVAG+VGLAF DPN LLKG G+EGI + LLER HPGLR+G RHDP
Sbjct: 176 EEQKNYFLPKLASGELIPCFGLTGPRSGSDAASMPDGGEVVMENGVLGVRATFKKRYITLAPVAGVVGLAFKAHDPNGLLKGVGSEGICVALLERDHPGLRIGARHDP 283
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSJ0_9STRA) HSP 1 Score: 167 bits (423), Expect = 3.430e-46 Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 1
Query: 1 QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
+ QK+ +LP+L SGELIPCFGLTGP SGSDAASM D G V ENGV+GVRATFKKRYITLAPVAG+VGLAF DPN LLKG G+EGI + LLER HPGLR+G RHDP
Sbjct: 176 EEQKNYFLPKLASGELIPCFGLTGPRSGSDAASMPDGGEVVMENGVLGVRATFKKRYITLAPVAGVVGLAFKAHDPNGLLKGVGSEGICVALLERDHPGLRIGARHDP 283
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WY16_9STRA) HSP 1 Score: 158 bits (400), Expect = 5.370e-43 Identity = 75/105 (71.43%), Postives = 88/105 (83.81%), Query Frame = 1
Query: 7 QKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHD 321
QK+ +LP L SGE +PCFGLTGPSSGSDAA+MRD G V +NGV+G+RATF KRYITLAPVA VGLA ++KDP+NLLKG G+EGIT+ LLER HPGL +G RHD
Sbjct: 178 QKNYFLPALASGEHLPCFGLTGPSSGSDAANMRDTGVVCVQNGVLGIRATFSKRYITLAPVATCVGLAIDVKDPDNLLKGVGHEGITVALLERNHPGLEMGRRHD 282
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7S4_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.190e-42 Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1
Query: 1 QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASM-RDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
Q+QK+ +LPRL G LIPCFGLTGP SGSDA S+ G V + NG +G+RATFKKRYITLAPVAG+VGL NL DPNNLLK +G EG T+ LLER HPGLR+GDRH P
Sbjct: 203 QSQKEYFLPRLADGTLIPCFGLTGPHSGSDATSLIGSEGIVEQRNGELGIRATFKKRYITLAPVAGVVGLGLNLHDPNNLLKDQGQEGFTVALLERDHPGLRMGDRHIP 311
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Acyl-coenzyme (A dehydrogenase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XTQ6_9STRA) HSP 1 Score: 155 bits (393), Expect = 5.270e-42 Identity = 74/107 (69.16%), Postives = 90/107 (84.11%), Query Frame = 1
Query: 1 QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHD 321
+AQK+ YLP L SG+ +PCFGLTGPSSGSDAA+MRD G V E++GV+G+RATF KRYITLAPVA VGLA ++KDP+ LLKG G+EGIT+ LLER H GL++G RHD
Sbjct: 194 EAQKNYYLPGLASGKQLPCFGLTGPSSGSDAAAMRDSGVVVEQDGVLGIRATFNKRYITLAPVATCVGLAIDVKDPHGLLKGLGHEGITVALLERDHAGLQMGRRHD 300
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDY3_9STRA) HSP 1 Score: 153 bits (386), Expect = 6.260e-42 Identity = 76/108 (70.37%), Postives = 83/108 (76.85%), Query Frame = 1
Query: 4 AQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEE-NGVMGVRATFKKRYITLAPVAGIVGLAFNLKDPNNLLKGKGNEGITLCLLERGHPGLRLGDRHDP 324
AQK+ +LPRL G LIPCFGLTGP SGSDA S+ V EE NG +GV ATFKKRYITLAPVAG+VGL NL DPN LLKG G EG T+ LLER HPGLR+GDRH P
Sbjct: 204 AQKEYFLPRLADGTLIPCFGLTGPHSGSDATSLIGSDCVVEERNGELGVMATFKKRYITLAPVAGVVGLGLNLSDPNGLLKGNGGEGFTVALLERDHPGLRMGDRHIP 311 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74528.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs74528.1.1 >prot_H-canaliculatus_M_contigs74528.1.1 ID=prot_H-canaliculatus_M_contigs74528.1.1|Name=mRNA_H-canaliculatus_M_contigs74528.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=108bp QAQKDNYLPRLGSGELIPCFGLTGPSSGSDAASMRDVGYVTEENGVMGVRback to top mRNA from alignment at H-canaliculatus_M_contigs74528:2..551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs74528.1.1 ID=mRNA_H-canaliculatus_M_contigs74528.1.1|Name=mRNA_H-canaliculatus_M_contigs74528.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=550bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74528:2..551- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74528:2..551- >mRNA_H-canaliculatus_M_contigs74528.1.1 ID=mRNA_H-canaliculatus_M_contigs74528.1.1|Name=mRNA_H-canaliculatus_M_contigs74528.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=324bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74528:2..551- (Hapterophycus canaliculatus Oshoro7m male)back to top |