mRNA_H-canaliculatus_M_contigs7452.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U8_9PHAE) HSP 1 Score: 300 bits (768), Expect = 4.770e-95 Identity = 146/195 (74.87%), Postives = 172/195 (88.21%), Query Frame = 1
Query: 7 QYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
QYWRNPNYNWMR+Q+AI++AV+FGS+FID D++TE+D+ SRL VI+MST FVG ICLQ IPA A+ERIVFYREQAANMYSV SYAIGYAVAELPY+LFI+LAFC+IFYW+TGLADSA++FF YWLYFL MVFTGMM V+VLPN QVAQTL G L+++ SLFAGFLISPA +PD WLFA+YL+PLHYV+E
Sbjct: 444 QYWRNPNYNWMRMQLAILMAVIFGSSFID-ADIETESDLASRLAVIFMSTMFVGVICLQTAIPAGAKERIVFYREQAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWITGLADSADRFFMYWLYFLXXXXXMVFTGMMFVMVLPNTQVAQTLAGALSSMFSLFAGFLISPAKIPDPWLFAFYLNPLHYVVE 637
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: Pleiotropic (drug resistance transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN4_ECTSI) HSP 1 Score: 300 bits (769), Expect = 3.960e-91 Identity = 146/197 (74.11%), Postives = 173/197 (87.82%), Query Frame = 1
Query: 1 MIQYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
+IQYWRNPNYNWMR+Q+AI++AV+FGS+FID D++TE+D+ SRL VI+MST FVG ICLQ IPA A+ERIVFYREQAANMYSV SYAIGYAVAELPY+LFI+LAFC+IFYW+TGLADSA++FF YWLYF MVFTGMM V+VLPN QVAQTL G L+++ SLFAGFLISPA +PD WLFA+YL+PLHYV+E
Sbjct: 1177 VIQYWRNPNYNWMRMQLAILIAVIFGSSFID-ADIETESDLASRLAVIFMSTMFVGVICLQTAIPAGAKERIVFYREQAANMYSVRSYAIGYAVAELPYILFISLAFCSIFYWITGLADSADQFFMYWLYFXXXXXXMVFTGMMFVMVLPNTQVAQTLAGALSSMFSLFAGFLISPAKIPDPWLFAFYLNPLHYVVE 1372
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP2_ECTSI) HSP 1 Score: 281 bits (720), Expect = 1.520e-84 Identity = 137/197 (69.54%), Postives = 168/197 (85.28%), Query Frame = 1
Query: 1 MIQYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
++QYWRN +YNWMR+Q+AI+ A++FGS+FID +D +TEADV SRLGVIYMST FVG ICL+ +PA +ERIVFYREQAANMYSV SYAIGYAVAELPY+LF++LAFC+IFYW+T LA+SA +FF YWLYF+LW + MVFTGMM+V VA+TLG L+++ SLFAGFLI+PA VPD WLFAYYL+PLHYV+E
Sbjct: 1089 VMQYWRNQDYNWMRMQLAILTAIIFGSSFID-SDFETEADVASRLGVIYMSTMFVGVICLETAMPAAVKERIVFYREQAANMYSVRSYAIGYAVAELPYILFMSLAFCSIFYWMTDLANSAHQFFMYWLYFILWISLMVFTGMMLV------MVAETLGSALSSMFSLFAGFLINPAKVPDPWLFAYYLNPLHYVVE 1278
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN0_ECTSI) HSP 1 Score: 253 bits (646), Expect = 4.680e-78 Identity = 121/197 (61.42%), Postives = 156/197 (79.19%), Query Frame = 1
Query: 1 MIQYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
++QYWRNPNYNW RI +A+V+A++FG+ I DL++EADV ++ GVIYMST FVG+IC+Q I A ERIVFYRE+AANMYS +Y IGY VAE+PY++ ITLAFC IFY+V GLA +A +FFFYW+YF+LW TFMVF GMM V ++P+ A L G L ++ S+FAGFLISPA +P WL+AYYL+PLHY++E
Sbjct: 326 ILQYWRNPNYNWSRIMLALVIAIIFGTASIG-RDLESEADVGAQTGVIYMSTMFVGSICMQTAIAAGFLERIVFYREKAANMYSSLAYVIGYTVAEVPYIVVITLAFCCIFYFVMGLAATAHQFFFYWMYFMLWVTFMVFNGMMFVFIIPSFSTAGVLAGTLVSMFSVFAGFLISPAKIPGLWLWAYYLNPLHYILE 521
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: Atp-binding (cassette superfamily n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YUH2_NANGC) HSP 1 Score: 186 bits (471), Expect = 6.110e-51 Identity = 89/195 (45.64%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 10 YWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLA-DSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
YWR+PNYN+ R+ I+++VAVVFGS F D TE D+V R+G++Y+ST FVG + + +V+P +A+ER FYREQA++MYSV +Y + Y + ELPY+ T F +FYW GLA + KF +YW++F L+ +VF G ++ +LPN Q AQ G + +++LF G+L +P + W F YYL P HY++E
Sbjct: 701 YWRSPNYNFTRMFISVLVAVVFGSVF-HDKPYDTETDIVGRVGLMYLSTSFVGIVNMMSVMPVMAKERAAFYREQASSMYSVFAYGVSYGLVELPYIFVSTGLFINVFYWFIGLAAEPFSKFVYYWVFFALYIVCLVFIGQFLICLLPNQQTAQVAGASIAAIMNLFGGYLCTPRTITPFWKFVYYLVPSHYMLE 894
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: Atp-binding (cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP47_9STRA) HSP 1 Score: 186 bits (471), Expect = 7.980e-51 Identity = 89/195 (45.64%), Postives = 131/195 (67.18%), Query Frame = 1
Query: 10 YWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLA-DSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
YWR+PNYN+ R+ I+++VAVVFGS F D TE D+V R+G++Y+ST FVG + + +V+P +A+ER FYREQA++MYSV +Y + Y + ELPY+ T F +FYW GLA + KF +YW++F L+ +VF G ++ +LPN Q AQ G + +++LF G+L +P + W F YYL P HY++E
Sbjct: 1310 YWRSPNYNFTRMFISVLVAVVFGSVF-HDKPYDTETDIVGRVGLMYLSTSFVGIVNMMSVMPVMAKERAAFYREQASSMYSVFAYGVSYGLVELPYIFVSTGLFINVFYWFIGLAAEPFSKFVYYWVFFALYIVCLVFIGQFLICLLPNQQTAQVAGASIAAIMNLFGGYLCTPRTITPFWKFVYYLVPSHYMLE 1503
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: ABC-2 (type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIR5_9STRA) HSP 1 Score: 178 bits (451), Expect = 3.810e-48 Identity = 93/195 (47.69%), Postives = 132/195 (67.69%), Query Frame = 1
Query: 7 QYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
QYWR+PNYN+ R A++ A+VF S+F++ +T A + S GVI+M+ FVG + Q IP A ER VFYREQA+NMY+V +++G+ +AE+PY++F TL TIFY++ LA A KFF+ L T+ M F G M ++LP + AQ+ GG + + ++F GFLISPA +PD W++AYYLSPLHY +E
Sbjct: 1036 QYWRSPNYNFARSFSAVIQALVFASSFVNSNP-ETVAQLTSVFGVIFMACNFVGIMNYQTSIPFTAMERAVFYREQASNMYAVQPFSLGHFLAEIPYLIFNTLLSTTIFYFMANLAPEAAKFFWXXXXXXLNTSAMTFLGHAMTVLLPTVKAAQSFGGVINSFFAVFGGFLISPALIPDYWIWAYYLSPLHYAIE 1229
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: ABC-2 (type transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F1_9STRA) HSP 1 Score: 167 bits (423), Expect = 2.210e-44 Identity = 83/195 (42.56%), Postives = 122/195 (62.56%), Query Frame = 1
Query: 7 QYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
QYWR+ +YN+ R+ A++ A+VF S F++ ++ T + SR GV++ T F+ IP ER VFYREQAA MY V Y +GY +AE+PY++F TL +IFYW+ A KFF++WL+F L TT M F G + +LP+ + AQ L +L ++F GF ISP +P+ W++AYY++P HY +E
Sbjct: 1110 QYWRSASYNFARMFAAVIQALVFASTFVN-SEPTTVGQLTSRFGVVFSITTFIAITFFNTAIPFTGAERSVFYREQAARMYHVQPYILGYFLAEIPYLIFNTLLCISIFYWMANFEADAAKFFWFWLFFFLNTTAMTFFGHGLTAILPSIKDAQALASVSNSLFAVFGGFFISPGQIPNYWIWAYYITPFHYAIE 1303
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: Hypothetical (protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH75_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.240e-43 Identity = 78/198 (39.39%), Postives = 124/198 (62.63%), Query Frame = 1
Query: 4 IQYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGL--ADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
+ YWR+P YN++R+ ++ ++A++F S + T+ DV++R+ V+Y+S F+G + +++V P + EER FYREQ + +Y V Y + + E+PY++ +L F F+++ G D KFF+YWLY L+ + MVF G + + +A LGG L+ +ISLF GFLI P PD W+F Y+L PLHYV+E
Sbjct: 228 LAYWRSPTYNFVRVVVSSLIALIFASTYAQQK-YTTDVDVIARVAVVYISAMFMGVVNMKSVQPVILEERPAFYREQFSKLYDVKLYVLAATLVEIPYLIVTSLCFVVPFFFIVGFDQGDVTVKFFWYWLYSALYMSVMVFLGHFLSSSMKDAAAVDVLGGMLSTVISLFGGFLIRPELFPDFWIFMYWLDPLHYVIE 424
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTE1_9STRA) HSP 1 Score: 156 bits (394), Expect = 1.720e-40 Identity = 81/197 (41.12%), Postives = 123/197 (62.44%), Query Frame = 1
Query: 1 MIQYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMSTFFVGAICLQNVIPAVAEERIVFYREQAANMYSVCSYAIGYAVAELPYVLFITLAFCTIFYWVTGLADSAEKFFFYWLYFLLWTTFMVFTGMMMVIVLPNAQVAQTLGGPLTNLISLFAGFLISPANVPDGWLFAYYLSPLHYVME 591
M +YWR +Y+ R+ IAI VAV+FG F + L V ++ +I++ F+G I + +P V ERIVF+RE+A+ MY+ YA Y++ E+PYVLF +L F +FY++ L + FF+++LY++L+ F + G +V VLP+ + A G L +LISLFAGF I ++PDGW Y++SPLHY +E
Sbjct: 1017 MRKYWRTRDYSVGRVLIAIFVAVIFGILFQGNYALDYTTQVQAQASLIFVGPLFMGIISVLTGLPVVDAERIVFFRERASGMYATYPYATVYSLVEIPYVLFNSLVFSVVFYFMIDLKPDSGAFFWFYLYYMLYNLFATYLGQFLVAVLPDLRTAVVATGGLNSLISLFAGFFIHKHSIPDGWSILYWMSPLHYTLE 1213 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7452.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7452.1.1 >prot_H-canaliculatus_M_contigs7452.1.1 ID=prot_H-canaliculatus_M_contigs7452.1.1|Name=mRNA_H-canaliculatus_M_contigs7452.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=198bp MIQYWRNPNYNWMRIQIAIVVAVVFGSNFIDDTDLKTEADVVSRLGVIYMback to top mRNA from alignment at H-canaliculatus_M_contigs7452:1750..4654- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7452.1.1 ID=mRNA_H-canaliculatus_M_contigs7452.1.1|Name=mRNA_H-canaliculatus_M_contigs7452.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=2905bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7452:1750..4654- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7452:1750..4654- >mRNA_H-canaliculatus_M_contigs7452.1.1 ID=mRNA_H-canaliculatus_M_contigs7452.1.1|Name=mRNA_H-canaliculatus_M_contigs7452.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=594bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7452:1750..4654- (Hapterophycus canaliculatus Oshoro7m male)back to top |