mRNA_H-canaliculatus_M_contigs74492.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: Ribose (import ATP-binding protein RbsA n=1 Tax=Jannaschia sp. (strain CCS1) TaxID=290400 RepID=RBSA_JANSC) HSP 1 Score: 320 bits (820), Expect = 3.100e-105 Identity = 170/184 (92.39%), Postives = 175/184 (95.11%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GITKPS+GTI I+GEARTI SPA AI NGIVYVPEDRG+QGAVLGLPIFQNVTLPSLSQTS+ GFLKLA EFALAR YTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIM+SSEIPEILGMSDRVIVMREGLIAAEL R DLSP
Sbjct: 310 GITKPSAGTIQIAGEARTIGSPAQAIENGIVYVPEDRGQQGAVLGLPIFQNVTLPSLSQTSRGGFLKLAAEFALARDYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMVSSEIPEILGMSDRVIVMREGLIAAELDRADLSP 493
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: Sugar (ABC transporter ATP-binding protein n=1 Tax=Roseibacterium sp. TaxID=2003362 RepID=A0A7C7VFD8_9RHOB) HSP 1 Score: 315 bits (808), Expect = 6.610e-104 Identity = 163/184 (88.59%), Postives = 177/184 (96.20%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GIT+PS+GT+HI G+A TIRSP DAIANGIVYVPEDRGKQGAVLGLPI+QNVTLPSLSQTS++GFL+LA EFALAR YTERLELRAA+LDQ +GNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLA+IMISSEIPEILGMSDRVIVMR+GLIAAEL+R +LSP
Sbjct: 254 GITRPSAGTLHIGGDACTIRSPVDAIANGIVYVPEDRGKQGAVLGLPIYQNVTLPSLSQTSRSGFLRLANEFALARKYTERLELRAASLDQVMGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAIIMISSEIPEILGMSDRVIVMRDGLIAAELSRSELSP 437
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: Putative (atp-binding abc transporter protein n=4 Tax=Maritimibacter TaxID=404235 RepID=A3VEE7_9RHOB) HSP 1 Score: 304 bits (779), Expect = 4.550e-99 Identity = 153/184 (83.15%), Postives = 173/184 (94.02%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GITKPS G + I G+ + IRSPADA+ NGIVYVPEDRGKQGAV+GLPIFQN+TLPSLSQTS+AGFL+++ EFALAR YTERL+LRAA+LDQDVGNLSGGNQQKVVIAKWLATKP+VIILDEPTKGIDIGSKAAVHAFMAELAA+GLAVIM+SSEIPE++GMSDRVIVMREGLIAAEL ++L+P
Sbjct: 317 GITKPSKGVVKIDGDIKVIRSPADAVDNGIVYVPEDRGKQGAVIGLPIFQNITLPSLSQTSRAGFLRMSEEFALAREYTERLDLRAASLDQDVGNLSGGNQQKVVIAKWLATKPKVIILDEPTKGIDIGSKAAVHAFMAELAAQGLAVIMVSSEIPEVMGMSDRVIVMREGLIAAELEGDNLTP 500
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: sugar (ABC transporter ATP-binding protein n=1 Tax=Pseudoruegeria sp. HB172150 TaxID=2721164 RepID=UPI001551ABA9) HSP 1 Score: 303 bits (776), Expect = 1.180e-98 Identity = 158/184 (85.87%), Postives = 168/184 (91.30%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GIT+PS G I I G I SPADAIANGIVYVPEDRGKQGA++GLPIFQNVTLPSLSQTS GFL+LA EF LAR YTERL+LRAA+LDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAA+GLAVIM+SSEIPEILGMSDRVIVMREGLIAAE+A DL+P
Sbjct: 315 GITRPSGGKIRIDGSDAAIHSPADAIANGIVYVPEDRGKQGAIMGLPIFQNVTLPSLSQTSNRGFLRLAEEFKLAREYTERLDLRAASLDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAQGLAVIMVSSEIPEILGMSDRVIVMREGLIAAEIAGGDLTP 498
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: Rhamnose (ABC transporter ATP-binding protein n=1 Tax=Poseidonocella sedimentorum TaxID=871652 RepID=A0A1I6EM04_9RHOB) HSP 1 Score: 303 bits (776), Expect = 1.250e-98 Identity = 156/184 (84.78%), Postives = 170/184 (92.39%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GIT+PS G + I G + IRSPADA+ANGIVYVPEDRGKQGAV+G+PIFQNVTLPSLSQTS GFL+LA EFALAR YTERL+LRAAALDQDVGNLSGGNQQKVVIAKWLAT+P+VIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIM+SSEIPE+LGMSDRVIVMREGLIAAEL + L+P
Sbjct: 316 GITRPSKGAVKIDGAIKVIRSPADAVANGIVYVPEDRGKQGAVIGMPIFQNVTLPSLSQTSHRGFLRLAEEFALARRYTERLDLRAAALDQDVGNLSGGNQQKVVIAKWLATQPKVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMVSSEIPEVLGMSDRVIVMREGLIAAELEGDALTP 499
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: Rhamnose (transport system ATP-binding protein n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A7W6DQW2_9RHOB) HSP 1 Score: 303 bits (775), Expect = 1.720e-98 Identity = 156/184 (84.78%), Postives = 171/184 (92.93%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GITKPS G I G+ + IRSPA+A+ GIVYVPEDRGKQGAV+GLPIFQNVTLPSLSQTS++GFL+L+ EFALARAYTERL+LRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAE L+VIM+SSEIPE+LGMSDRVIVMREGLIAAEL +DL+P
Sbjct: 316 GITKPSKGVTRIDGQIKVIRSPAEAVEAGIVYVPEDRGKQGAVIGLPIFQNVTLPSLSQTSRSGFLRLSEEFALARAYTERLDLRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAERLSVIMVSSEIPEVLGMSDRVIVMREGLIAAELEGDDLTP 499
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: Rhamnose (ABC transporter ATP-binding protein n=2 Tax=Silicimonas algicola TaxID=1826607 RepID=A0A316GC73_9RHOB) HSP 1 Score: 302 bits (773), Expect = 5.540e-98 Identity = 156/184 (84.78%), Postives = 171/184 (92.93%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GIT+ SSGT+ + G A IR+PADAIA GIVYVPEDRGKQGAV+GLPIFQN+TLPSL QTS+ GFLKLAREFALAR Y ERLELRAA+LDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIM+SSEIPEI+GMSDRVIVMREGL+AA++ +DL+P
Sbjct: 332 GITRASSGTVSLDGAALNIRAPADAIAAGIVYVPEDRGKQGAVIGLPIFQNITLPSLDQTSRQGFLKLAREFALARTYVERLELRAASLDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMVSSEIPEIVGMSDRVIVMREGLMAAKVKGDDLTP 515
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: sugar (ABC transporter ATP-binding protein n=1 Tax=Sagittula salina TaxID=2820268 RepID=UPI001ADEEFA4) HSP 1 Score: 301 bits (771), Expect = 8.630e-98 Identity = 154/184 (83.70%), Postives = 170/184 (92.39%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GIT+PS G + I G+ + IRSPADA+ NGIVYVPEDRG+QGAV+GLPIFQNVTLPSL +TSK GFL+LA EFALAR YTERL+LRAA+LDQDVGNLSGGNQQKVVIAKWLAT+PRVIILDEPTKGIDIGSKAAVHAFMAELAAEGL+VIM+SSEIPE+LGMSDRVIVMREGLIAAEL DL+P
Sbjct: 316 GITRPSKGVVKIGGQIKVIRSPADAVENGIVYVPEDRGRQGAVIGLPIFQNVTLPSLRRTSKNGFLRLAEEFALARQYTERLDLRAASLDQDVGNLSGGNQQKVVIAKWLATRPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLSVIMVSSEIPEVLGMSDRVIVMREGLIAAELEGGDLTP 499
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: D-ribose (transporter ATP-binding protein n=10 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1B1PW08_9RHOB) HSP 1 Score: 298 bits (764), Expect = 8.030e-97 Identity = 150/184 (81.52%), Postives = 171/184 (92.93%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
G+T+PS G + I G+ R IRSPA+A+ NGIVYVPEDRGKQGAV+GLPIFQNVTLPSL+QTS+ GFL+L++EFALAR YTERL+LRAAALDQDVGNLSGGNQQKVVIAKWLAT+P+VIILDEPTKGIDIGSKAAVH FMAELAA+GL+VIM+SSEIPE+LGMSDRVIVMREGLIAAEL + L+P
Sbjct: 317 GVTRPSKGAVRIDGQVRVIRSPAEAVENGIVYVPEDRGKQGAVIGLPIFQNVTLPSLAQTSRRGFLRLSQEFALAREYTERLDLRAAALDQDVGNLSGGNQQKVVIAKWLATQPKVIILDEPTKGIDIGSKAAVHGFMAELAAQGLSVIMVSSEIPEVLGMSDRVIVMREGLIAAELEGDALTP 500
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Match: Ribose (import ATP-binding protein RbsA n=1 Tax=Tritonibacter horizontis TaxID=1768241 RepID=A0A132BTX0_9RHOB) HSP 1 Score: 298 bits (764), Expect = 8.260e-97 Identity = 153/184 (83.15%), Postives = 170/184 (92.39%), Query Frame = 1
Query: 1 GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQNVTLPSLSQTSKAGFLKLAREFALARAYTERLELRAAALDQDVGNLSGGNQQKVVIAKWLATKPRVIILDEPTKGIDIGSKAAVHAFMAELAAEGLAVIMISSEIPEILGMSDRVIVMREGLIAAELAREDLSP 552
GIT+PS G + I G + IRSPADA++NGIVYVPEDRGKQGAV+GLPI+QNVTLPSLSQTS+ GFL+LA EF LAR YT+RL+LRAAALDQDVGNLSGGNQQKVVIAKWLATKP+VIILDEPTKGIDIGSKAAVHAFMAELAAEGL+VIM+SSEIPEI+GMSDRVIVMREGLIAAEL + L+P
Sbjct: 317 GITRPSKGVVKIDGTIKVIRSPADAVSNGIVYVPEDRGKQGAVIGLPIYQNVTLPSLSQTSRNGFLRLAEEFDLARHYTQRLDLRAAALDQDVGNLSGGNQQKVVIAKWLATKPKVIILDEPTKGIDIGSKAAVHAFMAELAAEGLSVIMVSSEIPEIMGMSDRVIVMREGLIAAELEGDALTP 500 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74492.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs74492.1.1 >prot_H-canaliculatus_M_contigs74492.1.1 ID=prot_H-canaliculatus_M_contigs74492.1.1|Name=mRNA_H-canaliculatus_M_contigs74492.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=184bp GITKPSSGTIHISGEARTIRSPADAIANGIVYVPEDRGKQGAVLGLPIFQback to top mRNA from alignment at H-canaliculatus_M_contigs74492:2..553+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs74492.1.1 ID=mRNA_H-canaliculatus_M_contigs74492.1.1|Name=mRNA_H-canaliculatus_M_contigs74492.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=552bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74492:2..553+ (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74492:2..553+ >mRNA_H-canaliculatus_M_contigs74492.1.1 ID=mRNA_H-canaliculatus_M_contigs74492.1.1|Name=mRNA_H-canaliculatus_M_contigs74492.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=552bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74492:2..553+ (Hapterophycus canaliculatus Oshoro7m male)back to top |