mRNA_H-canaliculatus_M_contigs7448.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male
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Overview
Homology
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6U7_ECTSI) HSP 1 Score: 285 bits (729), Expect = 3.930e-85 Identity = 141/218 (64.68%), Postives = 168/218 (77.06%), Query Frame = 1
Query: 1 ISVRLVVHYGRIWAAESNEDITADSLAEVASNLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQDSSDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALSVS 654
+SVRL +G +W +SNE T +SL EV +LTLPGTQ +IN+AL ++WYS P DWNS GQDTFE LSV VDEQ+ QGGDPYPGVPRTLI+L+ PINDPPLL+GP+ FT VEG TT+L GIEV D DA+D G +EV+V +E GS V LG+ GL I++SSD S TFQG++ N+N ALAGLTFRG FEFSG T KV+VDDMGNTG GGALS S
Sbjct: 57 VSVRLSAKFGHLWVKDSNEMDTVESLVEVGGSLTLPGTQDEINAALLNVWYSAPPDWNSLGQDTFEALSVLVDEQDSAQGGDPYPGVPRTLIVLIAPINDPPLLRGPSEFTAVEGRTTVLGGIEVSDVDAQDTTGSVLEVTVSAAEKGSNVELGAKLGLFIKNSSDESKTFQGSVTNINKALAGLTFRGAFEFSGATTFKVEVDDMGNTGGGGALSDS 274
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW5_9PHAE) HSP 1 Score: 276 bits (706), Expect = 4.850e-82 Identity = 137/218 (62.84%), Postives = 166/218 (76.15%), Query Frame = 1
Query: 1 ISVRLVVHYGRIWAAESNEDITADSLAEVASNLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQDSSDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALSVS 654
+SV L YGR+W SNE + L EV +LTLPGTQ +IN+AL ++WYS P DWNS GQDTFETLSV VDEQ+ QGGDPYPGVPRTL++LV P+NDPPLL+GP+ FT VEG TT+L GI+V D DA+D G +EV+V +E GS V LG+ GL I++SSD S TFQG++ N+N+ALAGLTFRG FEFSG T KV+V+DMGNTG G ALS S
Sbjct: 40 VSVHLSAKYGRLWMNGSNEVDIVEPLVEVGGSLTLPGTQDEINAALLNVWYSAPPDWNSLGQDTFETLSVLVDEQDSAQGGDPYPGVPRTLVVLVTPVNDPPLLRGPSEFTAVEGRTTVLGGIKVFDVDAQDTAGSVLEVTVSAAEKGSSVELGAKLGLFIKNSSDESKTFQGSVTNINNALAGLTFRGAFEFSGATTFKVEVNDMGNTGGGEALSDS 257
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: Ig-like (domain-containing protein n=1 Tax=Acaryochloris marina TaxID=155978 RepID=UPI001BAEFBC7) HSP 1 Score: 111 bits (278), Expect = 1.260e-24 Identity = 77/227 (33.92%), Postives = 123/227 (54.19%), Query Frame = 1
Query: 1 ISVRLVVHYGRIWAAESNE------DITADSLAEVASNLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQDS---SDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALSVS 654
+ V L V++G + A++N D TAD A GT DIN+AL+++ Y +D+N + +++ V++Q GG+ + +T+ I V P+ND PLL P V E T ++SGI + D D D G +EV++ S V++L GL +D+++ F+GTL ++N AL+ L +RG ++G L + V+D+GNTGEGGAL+ S
Sbjct: 771 LEVSLTVNHGVLNFAQTNGLTFSVGDGTADPTA------VFTGTLSDINTALDNLTYRAEADFNGS-----DAIAIAVNDQSAGNGGNGFTDT-QTVDIAVTPVNDAPLLTVPGAQAVDENTDLVVSGISIND---VDVDSGELEVTL--SATNGVMSLSQITGLAFTQGDGITDSTLIFRGTLSDINQALSNLIYRGNANYNGFDTLSIAVNDLGNTGEGGALTDS 980
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: DUF4347 (domain-containing protein (Fragment) n=2 Tax=Methylobacterium terricola TaxID=2583531 RepID=A0A5C4L895_9HYPH) HSP 1 Score: 90.1 bits (222), Expect = 3.400e-17 Identity = 73/218 (33.49%), Postives = 103/218 (47.25%), Query Frame = 1
Query: 16 VVHYGRIWAAESNEDITADSLAEVASNLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILS-----GIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQDSSDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALSVS 654
V H A + +T D V TL GT IN+AL+ Y P ++N ETL++ + G P TL I V +ND P+ P TV E T + + GI V D DA GRV ++ V +ALGST + + + S++ GTL VN+AL+G T+R +++G L V +D GNTG GGA+SV+
Sbjct: 1364 VAHGTLTLGARTGVTVTNDGTGAV----TLTGTATAINAALDGTIYRPNPNYNGP-----ETLTIVTTDNGNTGAGGPKSDT-DTLAIAVTAVNDAPVNGVPGPQTVDEDTNLVFAPGNGNGITVAD---VDAGSGRVTTTLHVQHG--TLALGSTANVTVTGAGTGSVSLTGTLAAVNAALSGTTYRAEADYNGSDVLTVTTNDGGNTGAGGAMSVT 1566
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: hypothetical (protein n=1 Tax=Rudanella lutea TaxID=451374 RepID=UPI00036CDBFB) HSP 1 Score: 89.4 bits (220), Expect = 5.720e-17 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 268 TLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQD-SSDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALSVS 654
++ + V +ND P+L PT TV E + + S +++ D EDA G +EV++ ++ +A S + D +SDA+MTF GTL N+N+AL GL FR ++G L V V+D GN+G GGA S S
Sbjct: 477 SVAVTVSAVNDAPVLTYPTNLTVQENSPVLFSSGQLIRVDDEDAGSGLMEVTMSATQGTFSLATTSGLTFSVGDGTSDAAMTFSGTLSNINTALNGLAFRPSVNYAGAASLVVTVNDQGNSGSGGARSAS 606
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: Cadherin-like ((Fragment) n=1 Tax=Tistlia consotensis USBA 355 TaxID=560819 RepID=A0A1Y6CDM4_9HYPH) HSP 1 Score: 87.4 bits (215), Expect = 3.010e-16 Identity = 65/236 (27.54%), Postives = 108/236 (45.76%), Query Frame = 1
Query: 7 VRLVVHYGRIWAAESNEDITADSLAEVASNLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHI--------------------QDSSDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALSVS 654
V L YG + + +TA + ++TL GT D+N+AL + Y+P +D+ +++S+ + ++ V G+ ++ + V ND P+ GPT +V E T S DAD +V V ++ LG+T GL + D +MTF+GTL +N+AL GL ++ +F+G + + V+D+GNTG GGA V+
Sbjct: 2285 VTLGATYGSLDFTSATSGVTATGAG--SHSVTLTGTIADLNTALAKLTYTPDTDYTGS-----DSISLAISDRGNVGSGNVLTDS-ASIALTVGGANDAPVFGGPTTASVSEDATLTFSSGNGNQITLADADSPTQDVMVRITVTNGTATLGTTSGLDFAFTETTNAFGADGGTTSGSGDGTGDTTMTFKGTLAEINAALNGLQYKPTGDFNGPATVTILVNDLGNTGTGGAQEVT 2512
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519FW17_9BURK) HSP 1 Score: 85.9 bits (211), Expect = 9.770e-16 Identity = 62/199 (31.16%), Postives = 94/199 (47.24%), Query Frame = 1
Query: 61 ITADSLAEVASNLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQDS---SDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALS 648
IT D A+ + +T GT IN+AL + Y P SD+N +TL++ + G T+ I V +ND P L P+ ++ E T + S D D G + V + ++L T GL SDASM+F GT+ ++N+ALAG+T+ ++G L + D+GNTG GG L+
Sbjct: 1212 ITGDGAAD--TTMTFSGTVASINAALAGMTYLPASDYNGA-----DTLTIVTSDMGNTGIGGTLLDT-DTVAITVNAVNDSPALTVPSARSIDEDTPLVFSSGNGTLISIADVDAGSGNMQVTIGVLHGSLSLSGTTGLSFVTGDGLSDASMSFTGTVADINAALAGMTYASTGHYNGADTLSILTSDLGNTGAGGVLT 1402
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: Uncharacterized (protein n=2 Tax=Tolypothrix TaxID=111782 RepID=A0A0C1QY43_9CYAN) HSP 1 Score: 85.9 bits (211), Expect = 1.030e-15 Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = 1
Query: 94 NLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTR-FTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQDSSDAS--MTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTG 630
N+T GT +IN+AL S+ + P + N G ET+ + V+++ + G + ++ I V IND P+ + T++E T I SG ++ D D G V V ++ +AL ST L SD S M F GT+ N+N+ALAG+TF EFSGI +K+ D+GN+G
Sbjct: 2067 NMTFTGTIANINTALASMQFLPKA--NFFGT---ETVEITVNDKGNIGSGGAKT-ITNSVSIDVQSINDAPVNTVLNKELTILEDTPIIFSGNNLIS--ISDLDAGNQPVEVTLTATNGTIALSSTKELQFTYGSDRSNGMIFTGTIANINTALAGMTFNPTPEFSGIASVKITTSDLGNSG 2240
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: Cadherin_4 (domain-containing protein n=1 Tax=Planctomycetes bacterium Pan189 TaxID=2527980 RepID=A0A517QW77_9BACT) HSP 1 Score: 84.3 bits (207), Expect = 3.540e-15 Identity = 68/197 (34.52%), Postives = 97/197 (49.24%), Query Frame = 1
Query: 64 TADSLAEVASNLTLPGTQGDINSALESIWYSPPSDWNSHGQDTFETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHIQDSSDASMTFQGTLKNVNSALAGLTFRGPFEFSGITE--LKVDVDDMGNTGEGGALS 648
T DS A+ ++TL G+ DIN+ L S+ Y+ +D DT L+V V++Q G V T+ I + +ND P+ P +VVE TTT +SGI V D DA GG + V + V L + + + +T G L ++NS LA LT+ G + +G L V +D GNTG GGA S
Sbjct: 2789 TIDSGADGTDDVTLRGSVTDINATLASLTYTGGTDVTGTAADT---LTVTVNDQGNTGSGGAQSDV-DTVQIDITAVNDAPVNTVPGTQSVVEETTTAISGISVND---VDAGGGSASTRLQVVDGVLSVTLSGSATISAGGNGSNDLTITGNLTDLNSTLATLTYTGNTDVTGTAADTLTVTTNDGGNTGSGGAQS 2978
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Match: RHS (repeat-associated core domain protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) TaxID=28072 RepID=K9R0F2_NOSS7) HSP 1 Score: 82.8 bits (203), Expect = 1.200e-14 Identity = 54/157 (34.39%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 193 FETLSVFVDEQELVQGGDPYPGVPRTLIILVVPINDPPLLQGPTRFTVVEGTTTILSGIEVLDRDAEDADGGRVEVSVLVSEAGSVVALGSTFGLHI---QDSSDASMTFQGTLKNVNSALAGLTFRGPFEFSGITELKVDVDDMGNTGEGGALSVS 654
FET SV+ + G + + I + +N+ P++ P V E T I++GI + D DA GG ++V+V ++ V+ L T GL ++D+++TF GTL +N A+AGLT+RG FSG + V+D+GN+G GGAL+ +
Sbjct: 470 FETKSVYSIRVKTTDAGGLF--FEKIFNIDITNVNEAPVIALPQAQFVAENTDLIITGISISD---VDAGGGELQVTVTANQG--VLTLSQTTGLTFTAGDGNADSNVTFTGTLTAINQAIAGLTYRGNPNFSGNDTITFTVNDLGNSGSGGALTTN 619 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs7448.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_M_contigs7448.1.1 >prot_H-canaliculatus_M_contigs7448.1.1 ID=prot_H-canaliculatus_M_contigs7448.1.1|Name=mRNA_H-canaliculatus_M_contigs7448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=218bp ISVRLVVHYGRIWAAESNEDITADSLAEVASNLTLPGTQGDINSALESIWback to top mRNA from alignment at H-canaliculatus_M_contigs7448:6..659- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_M_contigs7448.1.1 ID=mRNA_H-canaliculatus_M_contigs7448.1.1|Name=mRNA_H-canaliculatus_M_contigs7448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=654bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7448:6..659- (Hapterophycus canaliculatus Oshoro7m male)back to top Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs7448:6..659- >mRNA_H-canaliculatus_M_contigs7448.1.1 ID=mRNA_H-canaliculatus_M_contigs7448.1.1|Name=mRNA_H-canaliculatus_M_contigs7448.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=654bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs7448:6..659- (Hapterophycus canaliculatus Oshoro7m male)back to top |