mRNA_H-canaliculatus_M_contigs74472.1.1 (mRNA) Hapterophycus canaliculatus Oshoro7m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_M_contigs74472.1.1
Unique NamemRNA_H-canaliculatus_M_contigs74472.1.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro7m male (Hapterophycus canaliculatus Oshoro7m male)
Homology
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Inosine (triphosphate pyrophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ77_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.170e-21
Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 1 
Query:    1 VEQGDFNDANIILTPDLQDIEGVIDFGDTAHTWVMNDVAIAMAYAMLSPLAK 156
            V  GDFNDANIILTPD Q++ GVIDFGD AHTWV+NDVAIAMAYAMLSPLAK
Sbjct:  240 VVHGDFNDANIILTPDFQEVAGVIDFGDAAHTWVVNDVAIAMAYAMLSPLAK 291
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2D5_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.030e-10
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   13 DFNDANIILTPDLQDIEGVIDFGDTAHTWVMNDVAIAMAYAMLSPLAK 156
            D+NDANI++T D  ++ GVID GD  ++W +NDVAIAMAYAM++   K
Sbjct:  256 DYNDANIVMTEDGTEVAGVIDLGDVVNSWRVNDVAIAMAYAMITSFGK 303
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3XNA1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.620e-9
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 1 
Query:   10 GDFNDANIILTPD-----LQDIEGVIDFGDTAHTWVMNDVAIAMAYAMLSPLAK 156
            GDFNDAN+IL           + G+IDFGD  +TW +N++AIAMAYAMLS   K
Sbjct:  271 GDFNDANVILATGSDVLPCDKVVGIIDFGDMVYTWRVNEIAIAMAYAMLSSWGK 324
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Hydroxylysine (kinase /5-phosphonooxy-L-lysine phospho-lyase n=1 Tax=Ulvibacter sp. MAR_2010_11 TaxID=1250229 RepID=A0A2N0ER43_9FLAO)

HSP 1 Score: 52.4 bits (124), Expect = 1.790e-6
Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:    1 VEQGDFNDANIILTPDLQD--IEGVIDFGDTAHTWVMNDVAIAMAYAML 141
            V Q D ND NII++P+L +  +  +IDFGD  HT ++ND+A+A AYA++
Sbjct:  197 VVQNDANDNNIIVSPELINPTVAAIIDFGDAVHTQIINDLAVACAYAIM 245
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Aminotransferase (class III-fold pyridoxal phosphate-dependent enzyme n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A521A4Y1_9FLAO)

HSP 1 Score: 52.4 bits (124), Expect = 1.790e-6
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 1 
Query:    1 VEQGDFNDANIILTPDL--QDIEGVIDFGDTAHTWVMNDVAIAMAYAMLS 144
            V   D ND NII++ DL   ++  +IDFGDT HT ++NDVAIA AYA+++
Sbjct:  199 VVHNDANDNNIIVSEDLIQPEVVAIIDFGDTIHTQLINDVAIACAYAIMN 248
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: APH (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMF0_FISSO)

HSP 1 Score: 51.6 bits (122), Expect = 3.310e-6
Identity = 26/48 (54.17%), Postives = 30/48 (62.50%), Query Frame = 1 
Query:   13 DFNDANIILTPDLQDIEGVIDFGDTAHTWVMNDVAIAMAYAMLSPLAK 156
            D NDANI+     + + GVID+GD   TW   DVAI MAYAMLS   K
Sbjct:  263 DLNDANILCDEQCR-VTGVIDYGDAVETWRAADVAICMAYAMLSSYGK 309
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Aminotransferase (class III-fold pyridoxal phosphate-dependent enzyme n=5 Tax=Gelidibacter TaxID=49279 RepID=A0A7W2R3Q5_9FLAO)

HSP 1 Score: 51.6 bits (122), Expect = 3.350e-6
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 1 
Query:    1 VEQGDFNDANIILTPDL--QDIEGVIDFGDTAHTWVMNDVAIAMAYAML 141
            V   D ND NII++ DL    +E VID+GD  HT ++NDVA+A AYA++
Sbjct:  200 VVHNDANDNNIIVSSDLIGPKVEAVIDYGDAVHTQIINDVAVACAYAIM 248
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: aminotransferase (class III-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Gelidibacter salicanalis TaxID=291193 RepID=UPI0018F62A3D)

HSP 1 Score: 51.6 bits (122), Expect = 3.350e-6
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:    1 VEQGDFNDANIILTPDLQD--IEGVIDFGDTAHTWVMNDVAIAMAYAML 141
            V   D ND NII++ DL +  +E +ID+GD  HT ++ND+A+A AYA++
Sbjct:  200 VVHNDANDNNIIVSSDLMEPKVEAIIDYGDAVHTQIINDLAVACAYAIM 248
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Peptidase (M23 (Fragment) n=2 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3C2AB52_9BACT)

HSP 1 Score: 51.2 bits (121), Expect = 4.410e-6
Identity = 23/49 (46.94%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:    1 VEQGDFNDANIILTPDLQD--IEGVIDFGDTAHTWVMNDVAIAMAYAML 141
            V Q D ND N++++ DL D  +  +ID+GD  H+ ++NDVAIA+AYA++
Sbjct:  201 VIQNDANDNNVVVSEDLTDPKVVAIIDYGDAVHSQLINDVAIALAYAIM 249
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BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Match: Aminotransferase (class III-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI00198C3C8E)

HSP 1 Score: 51.2 bits (121), Expect = 4.580e-6
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 1 
Query:   13 DFNDANIILTPDLQDIEGVIDFGDTAHTWVMNDVAIAMAYAMLS 144
            D ND NI++   LQ + G+IDFGD   +  +NDVAIAMAY  LS
Sbjct:  198 DANDYNILVDETLQQVTGIIDFGDMVFSHTVNDVAIAMAYVALS 241
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_M_contigs74472.1.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Inosine2.170e-2184.62triphosphate pyrophosphatase n=2 Tax=Ectocarpus Ta... [more]
Hypothetical2.030e-1056.25protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=... [more]
Hypothetical4.620e-953.70protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hydroxylysine1.790e-648.98kinase /5-phosphonooxy-L-lysine phospho-lyase n=1 ... [more]
Aminotransferase1.790e-652.00class III-fold pyridoxal phosphate-dependent enzym... [more]
APH3.310e-654.17domain-containing protein n=2 Tax=Fistulifera sola... [more]
Aminotransferase3.350e-651.02class III-fold pyridoxal phosphate-dependent enzym... [more]
aminotransferase3.350e-646.94class III-fold pyridoxal phosphate-dependent enzym... [more]
Peptidase4.410e-646.94M23 (Fragment) n=2 Tax=Cytophagales bacterium TaxI... [more]
Aminotransferase4.580e-654.55class III-fold pyridoxal phosphate-dependent enzym... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_M_contigs74472contigH-canaliculatus_M_contigs74472:155..313 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro7m male vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro7m male2022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FZ77
PFAMsHam1p_like
Model size159
Max annot lvl2759|Eukaryota
KEGG rclassRC00002
KEGG koko:K01519
KEGG ReactionR00426,R00720,R01855,R02100,R02720,R03531,R08243
KEGG Pathwayko00230,ko00983,ko01100,map00230,map00983,map01100
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
Exons1
Evalue3.56e-22
EggNOG OGsCOG0127@1|root,KOG3222@2759|Eukaryota
DescriptionNADH pyrophosphatase activity
Cds size159
COG categoryF
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696854082.1838377-CDS-H-canaliculatus_M_contigs74472:154..3131696854082.1838377-CDS-H-canaliculatus_M_contigs74472:154..313Hapterophycus canaliculatus Oshoro7m maleCDSH-canaliculatus_M_contigs74472 155..313 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_M_contigs74472.1.1prot_H-canaliculatus_M_contigs74472.1.1Hapterophycus canaliculatus Oshoro7m malepolypeptideH-canaliculatus_M_contigs74472 155..313 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_M_contigs74472.1.1

>prot_H-canaliculatus_M_contigs74472.1.1 ID=prot_H-canaliculatus_M_contigs74472.1.1|Name=mRNA_H-canaliculatus_M_contigs74472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=polypeptide|length=53bp
VEQGDFNDANIILTPDLQDIEGVIDFGDTAHTWVMNDVAIAMAYAMLSPL
AK*
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mRNA from alignment at H-canaliculatus_M_contigs74472:155..313+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_M_contigs74472.1.1 ID=mRNA_H-canaliculatus_M_contigs74472.1.1|Name=mRNA_H-canaliculatus_M_contigs74472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=mRNA|length=159bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74472:155..313+ (Hapterophycus canaliculatus Oshoro7m male)
GTCGAACAGGGGGACTTCAACGACGCGAACATCATCCTGACCCCCGACCT
CCAGGACATCGAAGGCGTTATCGACTTCGGGGATACCGCTCACACCTGGG
TGATGAACGACGTCGCCATCGCCATGGCGTACGCTATGCTCTCTCCTCTG
GCCAAGTAA
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Coding sequence (CDS) from alignment at H-canaliculatus_M_contigs74472:155..313+

>mRNA_H-canaliculatus_M_contigs74472.1.1 ID=mRNA_H-canaliculatus_M_contigs74472.1.1|Name=mRNA_H-canaliculatus_M_contigs74472.1.1|organism=Hapterophycus canaliculatus Oshoro7m male|type=CDS|length=159bp|location=Sequence derived from alignment at H-canaliculatus_M_contigs74472:155..313+ (Hapterophycus canaliculatus Oshoro7m male)
GTCGAACAGGGGGACTTCAACGACGCGAACATCATCCTGACCCCCGACCT
CCAGGACATCGAAGGCGTTATCGACTTCGGGGATACCGCTCACACCTGGG
TGATGAACGACGTCGCCATCGCCATGGCGTACGCTATGCTCTCTCCTCTG
GCCAAGTAA
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