prot_H-canaliculatus_F_contig1535.3965.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1535.3965.1
Unique Nameprot_H-canaliculatus_F_contig1535.3965.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length163
Homology
BLAST of mRNA_H-canaliculatus_F_contig1535.3965.1 vs. uniprot
Match: D8LID7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LID7_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.180e-49
Identity = 80/98 (81.63%), Postives = 88/98 (89.80%), Query Frame = 0
Query:   65 SQYEQGSSEPSAGGSLGGSSEMQLQELIVDFTDDGRILLEVKGVKGNECRVITEDLIKALGDVITTENTEEYFEDKVVNVQHDPIKLGWSYDANKPEW 162
            S YEQ S EPSA G +  SSEM+LQELIVDFTDDGRILLEVKGVKG+ECRVITEDLIKALGDVITTENTEEYF++KVVN Q D ++LGWSYDA+KPEW
Sbjct:    2 STYEQSSPEPSASGEMSSSSEMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQEKVVNTQKDAVQLGWSYDASKPEW 99          
BLAST of mRNA_H-canaliculatus_F_contig1535.3965.1 vs. uniprot
Match: A0A6H5JNP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP0_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 3.140e-41
Identity = 67/78 (85.90%), Postives = 75/78 (96.15%), Query Frame = 0
Query:   85 EMQLQELIVDFTDDGRILLEVKGVKGNECRVITEDLIKALGDVITTENTEEYFEDKVVNVQHDPIKLGWSYDANKPEW 162
            EM+LQELIVDFTDDGRILLEVKGVKG+ECRVITEDLIKALGDVITTENTEEYF+++VVN Q D ++LGWSYDA+KPEW
Sbjct:   84 EMELQELIVDFTDDGRILLEVKGVKGSECRVITEDLIKALGDVITTENTEEYFQERVVNTQKDAVQLGWSYDASKPEW 161          
BLAST of mRNA_H-canaliculatus_F_contig1535.3965.1 vs. uniprot
Match: A0A2I0PSC1_9EURY (Uncharacterized protein n=2 Tax=unclassified Methanomicrobiales TaxID=38064 RepID=A0A2I0PSC1_9EURY)

HSP 1 Score: 50.1 bits (118), Expect = 2.090e-5
Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = 0
Query:   86 MQLQELIVDFTDDGRILLEVKGVKGNECRVITEDLIKALGDVITTENTEEYFEDKV 141
            M +QEL +   ++GR+L+ V GVKG +C  +T++L  A+GDV     + +Y+E  V
Sbjct:    1 MTMQELEITIDNEGRVLIHVNGVKGEDCLALTKNLENAVGDVQERSFSSDYYEQPV 56          
BLAST of mRNA_H-canaliculatus_F_contig1535.3965.1 vs. uniprot
Match: A0A7S0T336_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T336_9RHOD)

HSP 1 Score: 50.8 bits (120), Expect = 6.430e-5
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   88 LQELIVDFTDDGRILLEVKGVKGNECRVITEDLIKALGDVITTENTEEYFEDKV 141
            +QE+      DGR+   VKGVKG +C  IT+D+ + LG+V++ E T EYFE+ +
Sbjct:   84 VQEIEYRIHQDGRVEQVVKGVKGAKCVDITKDIEETLGEVVSQEKTNEYFENTI 137          
BLAST of mRNA_H-canaliculatus_F_contig1535.3965.1 vs. uniprot
Match: A0A1E7FR16_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FR16_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 8.260e-5
Identity = 29/83 (34.94%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   62 RMSSQYEQGSSEPSAGGSLGGSSEMQ---LQELIVDFTDDGRILLEVKGVKGNECRVITEDLIKALGDVITTENTEEYFEDKV 141
            R+ + Y   S E +A G  GG  + Q   L+++       GR+  +V GVKG +C  +T +L + LG+VI+T+ TEE +E+++
Sbjct:   38 RLYNDYSGNSWESAASGQSGGQQKAQSGRLEQVTFKIFPGGRVEEKVVGVKGQQCLEVTRELNQKLGNVISTQPTEEMYEEEI 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1535.3965.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LID7_ECTSI1.180e-4981.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNP0_9PHAE3.140e-4185.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2I0PSC1_9EURY2.090e-539.29Uncharacterized protein n=2 Tax=unclassified Metha... [more]
A0A7S0T336_9RHOD6.430e-544.44Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A1E7FR16_9STRA8.260e-534.94Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021375Protein of unknown function DUF2997PFAMPF11211DUF2997coord: 96..137
e-value: 2.9E-12
score: 46.2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..23
score: 0.681
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1535contigH-canaliculatus_F_contig1535:16305..18504 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1535.3965.1mRNA_H-canaliculatus_F_contig1535.3965.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1535 16305..18504 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1535.3965.1 ID=prot_H-canaliculatus_F_contig1535.3965.1|Name=mRNA_H-canaliculatus_F_contig1535.3965.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=163bp
MVIASLTRSLFVVLLLAAYAVEAFVVTARPPASYSRRSFRQQRQQQRSTP
KTSAAPPLTPARMSSQYEQGSSEPSAGGSLGGSSEMQLQELIVDFTDDGR
ILLEVKGVKGNECRVITEDLIKALGDVITTENTEEYFEDKVVNVQHDPIK
LGWSYDANKPEW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021375DUF2997