prot_H-canaliculatus_F_contig1513.3848.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1513.3848.1
Unique Nameprot_H-canaliculatus_F_contig1513.3848.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length372
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1513.3848.1 vs. uniprot
Match: A0A6H5L6Y5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Y5_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 1.570e-94
Identity = 181/263 (68.82%), Postives = 204/263 (77.57%), Query Frame = 0 
Query:  116 RRSDAPPGQRQEGEGQRAXXXGSISGSGVAMGSFLAACWASPARALAASA----IVGDAGGGEMGARVDPAATSAFGLVALAFAFLQSRIRTAVKARTARRDYEVLFKGMKAKQLAGQAEEEEVALVEERMSQLVREEQEARMVDIFGIPFNLVIPDGGAGGEPGIGAREARQ-RQVRSGSAND--TATGGSQQQERQLGIREAMKAKAESDMRDGRAREEEMSVGSTLKVAALWLVLISQLWLLVVLWNDPMGPASSAFLKD 371
            R S AP G+ +  EG R    GSI+  G  +    AAC A P+ +         IVG+AGG EMGARVDPAAT++F  V +AFAFLQSRIRTAV+ARTARR+YEVLFKGMKAKQLAGQA+E+EV LVEERMSQL++EEQEAR VDIFGIPFNLVIPDGGAGGEPG  AREA+Q R    G   D   A G   QQ++QLGIRE MKAKAESD+R  +AREEEMS G+TLKVAALWLVLISQLWLLVVLWNDPMGPASS FL+D
Sbjct:   94 RMSSAPSGEGRR-EGNRVV--GSIARGGDVVAFVAAACSAFPSCSXXXXXXXXXIVGEAGGSEMGARVDPAATASFAAVVVAFAFLQSRIRTAVRARTARRNYEVLFKGMKAKQLAGQADEKEVKLVEERMSQLLQEEQEARKVDIFGIPFNLVIPDGGAGGEPGTAAREAQQGRSSGRGELGDGGRAAGEGGQQQQQLGIRETMKAKAESDLRGRKAREEEMSTGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 353
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BLAST of mRNA_H-canaliculatus_F_contig1513.3848.1 vs. uniprot
Match: D7FXN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN2_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 6.850e-28
Identity = 58/66 (87.88%), Postives = 63/66 (95.45%), Query Frame = 0 
Query:  306 QLGIREAMKAKAESDMRDGRAREEEMSVGSTLKVAALWLVLISQLWLLVVLWNDPMGPASSAFLKD 371
            QLGIRE+MKAKAESD+RD +AREEEMS G+TLKVAALWLVLISQLWLLVVLWNDPMGPASS FL+D
Sbjct:   69 QLGIRESMKAKAESDLRDRKAREEEMSPGATLKVAALWLVLISQLWLLVVLWNDPMGPASSTFLQD 134
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1513.3848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6Y5_9PHAE1.570e-9468.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXN2_ECTSI6.850e-2887.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 340..357
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 358..371
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..339
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1513contigH-canaliculatus_F_contig1513:6800..11960 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1513.3848.1mRNA_H-canaliculatus_F_contig1513.3848.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1513 5782..12151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1513.3848.1 ID=prot_H-canaliculatus_F_contig1513.3848.1|Name=mRNA_H-canaliculatus_F_contig1513.3848.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=372bp
MMTRLISVLVFLDTTSSWSAAAVTATTTTTTLALGTSTPTILAFLTPTNP
PGRQQRQLKLQTTTGTRGGTLLLAKRSARQQPGGSAKRRPPPPRPAASRA
AVPSGSARRGGATQARRSDAPPGQRQEGEGQRAGGGGSISGSGVAMGSFL
AACWASPARALAASAIVGDAGGGEMGARVDPAATSAFGLVALAFAFLQSR
IRTAVKARTARRDYEVLFKGMKAKQLAGQAEEEEVALVEERMSQLVREEQ
EARMVDIFGIPFNLVIPDGGAGGEPGIGAREARQRQVRSGSANDTATGGS
QQQERQLGIREAMKAKAESDMRDGRAREEEMSVGSTLKVAALWLVLISQL
WLLVVLWNDPMGPASSAFLKD*
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