prot_H-canaliculatus_F_contig15125.3846.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig15125.3846.1
Unique Name	prot_H-canaliculatus_F_contig15125.3846.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	89

Homology

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BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.950e-28
Identity = 54/88 (61.36%), Postives = 64/88 (72.73%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCD+G E  ++E  T C +SGI IEY AT+TP QNGVSERDGQTL  I R L+K+G FPP++ GEL  T  YL NR PHSALGG  P
Sbjct:  232 IRCDRGRENVANEFTTYCMDSGITIEYAATNTPQQNGVSERDGQTLTTITRCLMKNGAFPPTLCGELMMTAVYLSNRSPHSALGGVTP 319

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BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5K2K7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K7_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 3.330e-28
Identity = 54/88 (61.36%), Postives = 60/88 (68.18%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    E +     S I +EY AT+TP Q GVSERDGQTLA + R L+KDG FPPSI GEL  T AYL NR PHSALGG  P
Sbjct:   61 IRCDKGGENTGSEFRDYSNNSAIKLEYPATNTPRQIGVSERDGQTLAGVARCLLKDGDFPPSIWGELMLTAAYLLNRCPHSALGGATP 148

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BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5KV62_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV62_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 1.540e-27
Identity = 51/88 (57.95%), Postives = 60/88 (68.18%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    E +  C  S I +EY AT+TP Q GVS RDGQ+LA++ R L+KDG FPPS+ GEL  T AYL NR PH ALGG  P
Sbjct:   62 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSGRDGQSLAEVTRCLVKDGDFPPSMWGELMLTAAYLLNRSPHLALGGATP 149

[Close]

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5JCI9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI9_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.870e-27
Identity = 51/88 (57.95%), Postives = 62/88 (70.45%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            LRCDKG E P +E +  C ES I +E+ AT+TP + GVSERDGQTLA + R L++DG FP  + GEL  TTAYL NR  H+ALGG  P
Sbjct:  183 LRCDKGGENPGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALLRDGDFPKHMWGELMMTTAYLTNRIAHAALGGATP 270

[Close]

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5K5H2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H2_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 2.960e-27
Identity = 54/88 (61.36%), Postives = 61/88 (69.32%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    E +  C  S I +EY AT+TP Q GVSERDGQTLA + R L+KDG FPPS+ GEL  T AYL NR PHSALGG  P
Sbjct:   37 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 124

[Close]

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5KF63_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF63_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 3.330e-27
Identity = 52/88 (59.09%), Postives = 61/88 (69.32%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    + +  C  S I +EY AT+TP Q GVSERDGQTLA + R L+KDG FPPS+ GE+  T AYL NR PHSALGG  P
Sbjct:  125 IRCDKGGENTGSDFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGEIMLTAAYLLNRSPHSALGGATP 212

[Close]

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.040e-27
Identity = 54/88 (61.36%), Postives = 61/88 (69.32%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    E +  C  S I +EY AT+TP Q GVSERDGQTLA + R L+KDG FPPS+ GEL  T AYL NR PHSALGG  P
Sbjct:  495 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 582

[Close]

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.390e-27
Identity = 54/88 (61.36%), Postives = 61/88 (69.32%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    E +  C  S I +EY AT+TP Q GVSERDGQTLA + R L+KDG FPPS+ GEL  T AYL NR PHSALGG  P
Sbjct:  171 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258

[Close]

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5JSL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL6_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.430e-27
Identity = 54/88 (61.36%), Postives = 61/88 (69.32%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    E +  C  S I +EY AT+TP Q GVSERDGQTLA + R L+KDG FPPS+ GEL  T AYL NR PHSALGG  P
Sbjct:  367 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 454

[Close]

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.450e-27
Identity = 54/88 (61.36%), Postives = 61/88 (69.32%), Query Frame = 0

Query:    1 LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIVRYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP 88
            +RCDKG E    E +  C  S I +EY AT+TP Q GVSERDGQTLA + R L+KDG FPPS+ GEL  T AYL NR PHSALGG  P
Sbjct:  171 IRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLLKDGDFPPSMWGELMLTAAYLLNRSPHSALGGATP 258

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig15125.3846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JT61_9PHAE	1.950e-28	61.36	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K2K7_9PHAE	3.330e-28	61.36	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KV62_9PHAE	1.540e-27	57.95	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5JCI9_9PHAE	2.870e-27	57.95	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K5H2_9PHAE	2.960e-27	61.36	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KF63_9PHAE	3.330e-27	59.09	Integrase catalytic domain-containing protein (Fra...	[more]
A0A6H5KVF6_9PHAE	4.040e-27	61.36	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5K500_9PHAE	4.390e-27	61.36	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JSL6_9PHAE	4.430e-27	61.36	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JRJ1_9PHAE	4.450e-27	61.36	Integrase catalytic domain-containing protein n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..88 e-value: 7.9E-9 score: 37.0
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..88 score: 12.195
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig15125	contig	H-canaliculatus_F_contig15125:2080..2346 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig15125.3846.1	mRNA_H-canaliculatus_F_contig15125.3846.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig15125 2080..2346 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig15125.3846.1 ID=prot_H-canaliculatus_F_contig15125.3846.1|Name=mRNA_H-canaliculatus_F_contig15125.3846.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=89bp
LRCDKGTEYPSDESKTICFESGINIEYTATHTPLQNGVSERDGQTLAKIV
RYLIKDGTFPPSIGGELFFTTAYLRNRFPHSALGGHPP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf