prot_H-canaliculatus_F_contig1512.3844.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1512.3844.1
Unique Nameprot_H-canaliculatus_F_contig1512.3844.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length142
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1512.3844.1 vs. uniprot
Match: D7G757_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G757_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 2.770e-13
Identity = 49/102 (48.04%), Postives = 60/102 (58.82%), Query Frame = 0 
Query:   20 MSGYSTLQSIVLATW--ILFLVFRFARDWNSRDSTPSNMHVPNEARSGGTRVQDEDRLDGTRSETNVPLAYREAAAQNNGHVPRGSSASRVAQEAATPEVRE 119
            MSG++T Q I       ++  +F FAR  +    T       +EA+ GGT  + +    G RSETNV LAY EAA QN G VPRGSSAS VA+ AATP VRE
Sbjct:    1 MSGFTTPQWIAFTFLGVVIGCLFCFARSDSKHIGT-------SEAQRGGTDQEQDHHATGARSETNVRLAYHEAAVQNGGQVPRGSSASVVARNAATPAVRE 95
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1512.3844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G757_ECTSI2.770e-1348.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1512contigH-canaliculatus_F_contig1512:11479..13015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1512.3844.1mRNA_H-canaliculatus_F_contig1512.3844.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1512 11477..13015 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1512.3844.1 ID=prot_H-canaliculatus_F_contig1512.3844.1|Name=mRNA_H-canaliculatus_F_contig1512.3844.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=142bp
SSSPCASPTFVTSFSPRCEMSGYSTLQSIVLATWILFLVFRFARDWNSRD
STPSNMHVPNEARSGGTRVQDEDRLDGTRSETNVPLAYREAAAQNNGHVP
RGSSASRVAQEAATPEVRELYRRESRVHGFVRSGSLAALTMT
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