prot_H-canaliculatus_F_contig1512.3842.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1512.3842.1
Unique Nameprot_H-canaliculatus_F_contig1512.3842.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length286
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1512.3842.1 vs. uniprot
Match: A0A6H5JLZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ7_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 2.280e-105
Identity = 172/246 (69.92%), Postives = 196/246 (79.67%), Query Frame = 0 
Query:   41 HRGFVGRGVARSYCGVNPSRTQRSLSGRLESTPMNTAETGCPQQRGEIKMMFDFFNPRARSQLQSRTYASSKTLFRDIETLDKCSSWTDPVIFSDQMALSPTTRGAIVSSVFRSIVVLAGFFFFPNIVEDLSPLIFLKDGALTDEVRLGLTGSFLPGVSLLFGALFSYTISLLVNRQHKIEEVVNAEVSALSSLVLHLEDYFRYSPDDLEASMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR 286
            H  F+GRGVAR++   +   TQR+                         M+ D F+ +ARSQL SRTYAS  +LFRDI+TLDKCSSWTDPVIFSDQMALSPTTRGA+ S+  RS++V+A F  FP +VE+++PLIFLKDGAL+DEVRLGLTGSFLPGVSLLFGALFSYTISLLVNRQ KIEE+VNAEVSAL S+VLH+EDYFRYSP  LEA+MEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR
Sbjct:   51 HGEFIGRGVARNWHSAHQRSTQRT------------------------SMIQDLFDTKARSQLVSRTYASDPSLFRDIDTLDKCSSWTDPVIFSDQMALSPTTRGALFSTAIRSLLVVAAFMSFPTLVEEIAPLIFLKDGALSDEVRLGLTGSFLPGVSLLFGALFSYTISLLVNRQIKIEEIVNAEVSALLSIVLHMEDYFRYSPVALEAAMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR 272
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1512.3842.1 vs. uniprot
Match: D7G758_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G758_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 2.370e-76
Identity = 125/150 (83.33%), Postives = 139/150 (92.67%), Query Frame = 0 
Query:  137 MALSPTTRGAIVSSVFRSIVVLAGFFFFPNIVEDLSPLIFLKDGALTDEVRLGLTGSFLPGVSLLFGALFSYTISLLVNRQHKIEEVVNAEVSALSSLVLHLEDYFRYSPDDLEASMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR 286
            MALSPTTRGA+ S+  RS++V+A F  FP +VED+SPLIFLKDGAL+DEVRLGLTGSFLPGVSLLFGALFSYTISLLVNRQ KIEE+VNAEVSAL +++LH+EDYFRYSP  LEA+MEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR
Sbjct:    1 MALSPTTRGALFSTAIRSLLVVAAFLSFPTLVEDISPLIFLKDGALSDEVRLGLTGSFLPGVSLLFGALFSYTISLLVNRQIKIEEIVNAEVSALLAILLHMEDYFRYSPVALEAAMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR 150
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1512.3842.1 vs. uniprot
Match: A0A835YX84_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX84_9STRA)

HSP 1 Score: 151 bits (382), Expect = 8.510e-40
Identity = 82/153 (53.59%), Postives = 111/153 (72.55%), Query Frame = 0 
Query:  137 MALSPTTRGAIVSSVFRSIVVLAGFFFFPNIVEDLSPLIFLKDG---ALTDEVRLGLTGSFLPGVSLLFGALFSYTISLLVNRQHKIEEVVNAEVSALSSLVLHLEDYFRYSPDDLEASMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR 286
            + L   TRGA++++ + +         FP++   L+PLI+  DG   AL + VR GLTGSFLPG+SLLFG LFSYTISLLVNRQ++IEE+VN E++A+++L+ HL D+F   P+  E +++A WRHTD LIF SRYQEIL LVQ D +E+LMR
Sbjct:   50 LLLECATRGALLAAAYAA---------FPHVCAALAPLIY-GDGSAAALNERVRAGLTGSFLPGISLLFGTLFSYTISLLVNRQNRIEELVNQELAAMTTLLWHLIDFFDGDPEKREQALKAVWRHTDQLIFNSRYQEILALVQGDSIEELMR 192
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1512.3842.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLZ7_9PHAE2.280e-10569.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G758_ECTSI2.370e-7683.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX84_9STRA8.510e-4053.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025333Protein of unknown function DUF4239PFAMPF14023DUF4239coord: 194..283
e-value: 2.9E-9
score: 37.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..187
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.513
NoneNo IPR availableTMHMMTMhelixcoord: 188..210
NoneNo IPR availableTMHMMTMhelixcoord: 146..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1512contigH-canaliculatus_F_contig1512:2328..6296 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1512.3842.1mRNA_H-canaliculatus_F_contig1512.3842.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1512 2328..6380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1512.3842.1 ID=prot_H-canaliculatus_F_contig1512.3842.1|Name=mRNA_H-canaliculatus_F_contig1512.3842.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=286bp
MGKRTRTAAFLAACCSSTLDAVHVSVHPRGVAAGSSASGVHRGFVGRGVA
RSYCGVNPSRTQRSLSGRLESTPMNTAETGCPQQRGEIKMMFDFFNPRAR
SQLQSRTYASSKTLFRDIETLDKCSSWTDPVIFSDQMALSPTTRGAIVSS
VFRSIVVLAGFFFFPNIVEDLSPLIFLKDGALTDEVRLGLTGSFLPGVSL
LFGALFSYTISLLVNRQHKIEEVVNAEVSALSSLVLHLEDYFRYSPDDLE
ASMEAAWRHTDTLIFQSRYQEILLLVQDDPLEDLMR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025333DUF4239