prot_H-canaliculatus_F_contig1511.3838.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1511.3838.1
Unique Nameprot_H-canaliculatus_F_contig1511.3838.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length173
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A6H5KV05_9PHAE (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV05_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 3.450e-77
Identity = 132/171 (77.19%), Postives = 144/171 (84.21%), Query Frame = 0 
Query:    1 MRGVDAWTTGLAALAMVGVTQGFVPHGTPAIRSAAATWGGRNGGNAHGKRARAAAAVAIPARPRSLAGLQMHQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 171
            MRGVDA T G A LA++GVT+GFVP+GTPAIRSAAAT GG    ++  +RAR         RP + + LQMHQVTIEHEG STVLEVDE T+IL+AALDNDI+LPHDCKLGVCLTCPS VVSGEVDQSDGTLEDSVTA GYALTCCTYARSDVTIRSVEEDELVGAQFSDR
Sbjct:    1 MRGVDACTAG-AFLALMGVTRGFVPYGTPAIRSAAATLGGSRTSDST-RRARQETL-----RP-TFSALQMHQVTIEHEGTSTVLEVDENTTILEAALDNDIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTALGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 163
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A7S3UW21_HETAK (Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW21_HETAK)

HSP 1 Score: 164 bits (415), Expect = 4.630e-49
Identity = 83/100 (83.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:   72 HQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 171
            HQVTIEHEG +TVLEV E TSILDAALD  I+LPHDCKLGVCLTCPS VVSGEVDQSDGTLEDSVTAQGYALTC T+ RSD TI S+ EDELV AQFS R
Sbjct:   42 HQVTIEHEGTTTVLEVPEYTSILDAALDAGIDLPHDCKLGVCLTCPSKVVSGEVDQSDGTLEDSVTAQGYALTCMTFPRSDCTIMSITEDELVDAQFSGR 141
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A836CGC2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGC2_9STRA)

HSP 1 Score: 157 bits (398), Expect = 2.640e-46
Identity = 79/114 (69.30%), Postives = 90/114 (78.95%), Query Frame = 0 
Query:   59 IPARPRSLAGLQMHQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFSDRE 172
            +  RPR   GL MHQVTIE  GKS  LEVDE TS+L+AALD  I LPHDCKLGVCLTCPS +VSGEVDQ   TL+DSV  QGYALTCC++ RSD+ IR+++EDELVGAQF  RE
Sbjct:   45 VARRPR---GLYMHQVTIEVAGKSHTLEVDEKTSVLEAALDAGIELPHDCKLGVCLTCPSKIVSGEVDQDGTTLDDSVVEQGYALTCCSFPRSDLVIRAIDEDELVGAQFEGRE 155
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A7S2V4F7_9STRA (Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F7_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.000e-45
Identity = 74/100 (74.00%), Postives = 86/100 (86.00%), Query Frame = 0 
Query:   72 HQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFSDR 171
            HQVTI+HEGK TVLEVDE T+IL+AALD  I+LPHDC+LGVCLTCPS +VSGEVDQ  GTL+DSV  QG+ALTC +Y RSD  +RSVEEDE+V AQF+DR
Sbjct:   51 HQVTIQHEGKDTVLEVDESTTILEAALDAGIDLPHDCQLGVCLTCPSRIVSGEVDQGMGTLDDSVVEQGFALTCISYPRSDCVVRSVEEDEMVNAQFADR 150
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A482SDV3_9ARCH (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SDV3_9ARCH)

HSP 1 Score: 143 bits (361), Expect = 7.420e-41
Identity = 68/98 (69.39%), Postives = 83/98 (84.69%), Query Frame = 0 
Query:   72 HQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFS 169
            ++VTI+HEGK T+L+V +  SIL+AALD  I+LPHDCKLGVCLTCPS +VSG+VDQSDGTL  SV A+GYALTC ++  SDV +RS+EEDELV AQFS
Sbjct:   43 YKVTIQHEGKDTILDVQDDCSILNAALDAGIDLPHDCKLGVCLTCPSKIVSGKVDQSDGTLAKSVQAKGYALTCVSFPCSDVVVRSIEEDELVSAQFS 140
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: Q850T5_ORYSJ (Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_ORYSJ)

HSP 1 Score: 130 bits (328), Expect = 8.290e-36
Identity = 61/98 (62.24%), Postives = 77/98 (78.57%), Query Frame = 0 
Query:   72 HQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFS 169
            ++VTIEH G+S V+EV+EG +IL  ALD  I++PHDCKLGVC+TCP+ +V+GEVDQSDG L D V AQGYAL C +Y RSD TIR + EDEL+  Q +
Sbjct:   46 YKVTIEHGGESRVVEVEEGETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLKVQLA 143
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A1E5VA51_9POAL (Ferredoxin n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5VA51_9POAL)

HSP 1 Score: 130 bits (326), Expect = 1.820e-35
Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 0 
Query:   49 KRARAAAAVAIPARPRSLAGLQMHQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFS 169
            +R + A  VA PA PR+      ++VTIEH  +S V+EV+E  +IL  ALD  +++PHDCKLGVC+TCP+ +VSGEVDQSDG L D V AQGYAL C  Y RSD TIR + EDEL+  Q +
Sbjct:   32 RRPQEARLVAAPAPPRA------YKVTIEHGNESRVVEVEEDETILSRALDEGLDVPHDCKLGVCMTCPARLVSGEVDQSDGMLSDDVVAQGYALLCAAYPRSDCTIRVIPEDELLQVQLA 146
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: UPI001ADA50ED (ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADA50ED)

HSP 1 Score: 128 bits (321), Expect = 8.170e-35
Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 0 
Query:   56 AVAIPARPRSLAGLQMHQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFS 169
            A A+PA PR+      ++VTIEH G+S V+EV E  +IL  ALD  I++PHDCKLGVC+TCP+ +V+GEVDQSDG L D V AQGYAL C +Y RSD TIR + EDEL+  Q +
Sbjct:   32 AAALPA-PRA------YRVTIEHGGESRVVEVGEDETILSRALDEGIDVPHDCKLGVCMTCPARLVAGEVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 138
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A5K0VF29_9MAGN (Ferredoxin n=2 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K0VF29_9MAGN)

HSP 1 Score: 128 bits (321), Expect = 1.070e-34
Identity = 61/109 (55.96%), Postives = 79/109 (72.48%), Query Frame = 0 
Query:   60 PARPRSLAGLQMHQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQF 168
            P R  ++A  + ++VTI+HEGKST LEV E  SIL+ ALD  + +PHDCKLGVC+TCP+ +VSGEVDQS G L D V  +GYAL C +Y RSD  IR++ E+EL+  Q 
Sbjct:   38 PTRQVAVASTKNYKVTIDHEGKSTTLEVGEDESILERALDEGLEVPHDCKLGVCMTCPARLVSGEVDQSGGMLSDDVVERGYALLCASYPRSDCHIRTIPEEELLSLQL 146
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BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Match: A0A8J5WV81_ZIZPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WV81_ZIZPA)

HSP 1 Score: 127 bits (320), Expect = 1.230e-34
Identity = 59/98 (60.20%), Postives = 77/98 (78.57%), Query Frame = 0 
Query:   72 HQVTIEHEGKSTVLEVDEGTSILDAALDNDINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYARSDVTIRSVEEDELVGAQFS 169
            ++VTIEH G+S V+EV+E  +IL+ ALD  I++PHDCKLGVC+TCP+ +V+G+VDQSDG L D V AQGYAL C +Y RSD TIR + EDEL+  Q +
Sbjct:   43 YKVTIEHAGESRVVEVEEHETILERALDEGIDVPHDCKLGVCMTCPARLVAGQVDQSDGMLSDDVVAQGYALLCASYPRSDCTIRVIPEDELLQVQLA 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1511.3838.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV05_9PHAE3.450e-7777.192Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S3UW21_HETAK4.630e-4983.00Ferredoxin n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
A0A836CGC2_9STRA2.640e-4669.302Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S2V4F7_9STRA1.000e-4574.00Ferredoxin n=1 Tax=Fibrocapsa japonica TaxID=94617... [more]
A0A482SDV3_9ARCH7.420e-4169.392Fe-2S iron-sulfur cluster binding domain-containi... [more]
Q850T5_ORYSJ8.290e-3662.24Ferredoxin n=11 Tax=Oryza TaxID=4527 RepID=Q850T5_... [more]
A0A1E5VA51_9POAL1.820e-3555.37Ferredoxin n=1 Tax=Dichanthelium oligosanthes TaxI... [more]
UPI001ADA50ED8.170e-3557.89ferredoxin C 1, chloroplastic n=1 Tax=Oryza brachy... [more]
A0A5K0VF29_9MAGN1.070e-3455.96Ferredoxin n=2 Tax=Nymphaea colorata TaxID=210225 ... [more]
A0A8J5WV81_ZIZPA1.230e-3460.202Fe-2S ferredoxin-type domain-containing protein n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 69..171
e-value: 1.1E-24
score: 88.0
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 77..149
e-value: 2.8E-14
score: 52.8
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 72..161
score: 12.778
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 66..168
NoneNo IPR availablePANTHERPTHR43112:SF9FERREDOXIN C 1, CHLOROPLASTICcoord: 66..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.645
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 56..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1511contigH-canaliculatus_F_contig1511:7170..11579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1511.3838.1mRNA_H-canaliculatus_F_contig1511.3838.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1511 7148..13115 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1511.3838.1 ID=prot_H-canaliculatus_F_contig1511.3838.1|Name=mRNA_H-canaliculatus_F_contig1511.3838.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=173bp
MRGVDAWTTGLAALAMVGVTQGFVPHGTPAIRSAAATWGGRNGGNAHGKR
ARAAAAVAIPARPRSLAGLQMHQVTIEHEGKSTVLEVDEGTSILDAALDN
DINLPHDCKLGVCLTCPSVVVSGEVDQSDGTLEDSVTAQGYALTCCTYAR
SDVTIRSVEEDELVGAQFSDRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf