prot_H-canaliculatus_F_contig15082.3824.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig15082.3824.1
Unique Nameprot_H-canaliculatus_F_contig15082.3824.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length155
Homology
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BLAST of mRNA_H-canaliculatus_F_contig15082.3824.1 vs. uniprot
Match: A0A6H5KQ06_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ06_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 2.150e-20
Identity = 63/161 (39.13%), Postives = 89/161 (55.28%), Query Frame = 0 
Query:    5 GAFSRGRLAG---ETAATGGGNGVGANFGRIGVATTRGGEARKEIGAGDTTVTEGMTGEEIHRVLNRAGASRATKAALCEILMSEVAPHMVNPERSKADR-------KMTTKGERGTNGVVSYVMVPYSHAFMGDAKKQYSGGQLPNKDNNPYVAVASHVF 155
            GA   GRL G    TA +GG  G  A+      A   G  +    GA    V    T +E+HR++  A  +   KAALC +LM + AP M +  +  +D        +   KGER TNGV++ +MV YS+AF+GDAKK++S G+LP+  NNP+VAV + V+
Sbjct:   34 GAAGSGRLLGIGTNTARSGGLGGASASTAGAPAARAHGAASVGGSGARGIIVDRASTADELHRIIKPA--TPLVKAALCGMLMYKTAPSMYSAIKPDSDNGSGNNGSREKVKGERSTNGVINRIMVTYSYAFVGDAKKRFSEGKLPSARNNPFVAVGAMVY 192
[Close]
BLAST of mRNA_H-canaliculatus_F_contig15082.3824.1 vs. uniprot
Match: A0A6H5KJF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF6_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 3.920e-19
Identity = 57/147 (38.78%), Postives = 82/147 (55.78%), Query Frame = 0 
Query:   16 TAATGGGNGVGANFGRIGVATTRGGEARKEIGAGDTTVTEGMTGEEIHRVLNRAGASRATKAALCEILMSEVAPHMVNPERSKADR-------KMTTKGERGTNGVVSYVMVPYSHAFMGDAKKQYSGGQLPNKDNNPYVAVASHVF 155
            TA +GG  G  A+      A   G  +    GA    V    T +E+HR++  A  +   KAALC +LM E A  M +  +  +D        +   KGER TNGV++ +MV YS+AF+GDAKK++S G+LP+  NNP+VAV + V+
Sbjct:  180 TARSGGLGGASASTAGAPAARAHGAASVGGSGARGIIVDRASTADELHRIIKPA--TPLVKAALCGMLMYETAHSMYSAIKPDSDNGSGNNGSREKVKGERSTNGVINRIMVTYSYAFVGDAKKRFSEGKLPSARNNPFVAVGAMVY 324
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig15082.3824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQ06_9PHAE2.150e-2039.13Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJF6_9PHAE3.920e-1938.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig15082contigH-canaliculatus_F_contig15082:45..1322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig15082.3824.1mRNA_H-canaliculatus_F_contig15082.3824.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig15082 44..1322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig15082.3824.1 ID=prot_H-canaliculatus_F_contig15082.3824.1|Name=mRNA_H-canaliculatus_F_contig15082.3824.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=155bp
DSDQGAFSRGRLAGETAATGGGNGVGANFGRIGVATTRGGEARKEIGAGD
TTVTEGMTGEEIHRVLNRAGASRATKAALCEILMSEVAPHMVNPERSKAD
RKMTTKGERGTNGVVSYVMVPYSHAFMGDAKKQYSGGQLPNKDNNPYVAV
ASHVF
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