prot_H-canaliculatus_F_contig1506.3806.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1506.3806.1
Unique Nameprot_H-canaliculatus_F_contig1506.3806.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length149
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1506.3806.1 vs. uniprot
Match: D7FZK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZK8_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 1.470e-5
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 0 
Query:    1 GKRPATNHAGGKGERRVASLFDLLQELSVPPKSNTTAISSSHGVQGAGAP--VTSTPFAT 58
            G RPA        E+RVASLFDLLQELSVPPKS      SS G Q AGAP   T++P A+
Sbjct:   44 GIRPAPGRPSAHSEQRVASLFDLLQELSVPPKSG----GSSLGAQAAGAPRGTTASPLAS 99
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BLAST of mRNA_H-canaliculatus_F_contig1506.3806.1 vs. uniprot
Match: A0A6H5KZ06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ06_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 6.840e-5
Identity = 34/66 (51.52%), Postives = 39/66 (59.09%), Query Frame = 0 
Query:    1 GKRPATNHAGGKGERRVASLFDLLQELSVPPKSNTTAISSSHGVQGAGAPVTSTPFATACSAHASR 66
            G RPA        E+RV SLFDLLQELSVPPKS      SSHG + AGAP  +T  + A S   +R
Sbjct:   33 GIRPAPGRPIAHSEQRVTSLFDLLQELSVPPKSG----GSSHGARPAGAPRGTTASSLASSLSTNR 94
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1506.3806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZK8_ECTSI1.470e-556.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZ06_9PHAE6.840e-551.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1506contigH-canaliculatus_F_contig1506:7587..8448 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1506.3806.1mRNA_H-canaliculatus_F_contig1506.3806.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1506 7586..8448 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1506.3806.1 ID=prot_H-canaliculatus_F_contig1506.3806.1|Name=mRNA_H-canaliculatus_F_contig1506.3806.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=149bp
GKRPATNHAGGKGERRVASLFDLLQELSVPPKSNTTAISSSHGVQGAGAP
VTSTPFATACSAHASRSSRSILPSGKRQQQSAALMAGAEPGEGSWRVASV
GGSRAVESSSNSLEPNAAANSGRGKTAAAALSANQPRGSKDTPEERSKR
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