prot_H-canaliculatus_F_contig1498.3737.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1498.3737.1
Unique Nameprot_H-canaliculatus_F_contig1498.3737.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length258
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1498.3737.1 vs. uniprot
Match: D7FIK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK4_ECTSI)

HSP 1 Score: 389 bits (1000), Expect = 1.360e-131
Identity = 198/266 (74.44%), Postives = 218/266 (81.95%), Query Frame = 0 
Query:    1 MDSSWQLDPRVLIFPITKPPPTSWEDVSRVHGRLSRHWALIRGLIEEQKRARKNRCSSTARLSATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIHKAGDKYLVSQVTARNPKHQPPTKAFAASAAAIVVALRREANRRAAAKSTAT---------ATKATAVWFTENEVRALAAPLCEEDLTHKGDEIVLGEVENFAWCSMAHLLSENKFDCVKKKDLDENATIAKLEELGRRPVCSSPGCNANATKSVGELSERVKVATFLR 257
            M S W LDPR+L FPITKPPPT WEDVS VHGR SRHW LIRGL+EEQK+ARKNR SS+ARL+ATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMI K G K+L +QVTARNPKHQP  K F ASAAAI+VA+ RE  RRA      +         A  A A WFTE E+R LAAPLCEEDLTH+GDEIVLGEVENFAWCSMA+L + NKFDCV +KDLDE ATIA+L+ELG RP+CSSPGCNA ATKS+G+LSERVK ATFLR
Sbjct:    1 MASDWALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLMEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIQKMGAKHLAAQVTARNPKHQPSNKTFVASAAAILVAMSREVKRRATVVDVTSESNGGKGPPAAAAPAAWFTEKEIRRLAAPLCEEDLTHRGDEIVLGEVENFAWCSMAYLTNHNKFDCVARKDLDEKATIAQLQELGERPICSSPGCNAYATKSMGDLSERVKTATFLR 266
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BLAST of mRNA_H-canaliculatus_F_contig1498.3737.1 vs. uniprot
Match: A0A6H5KF35_9PHAE (ERCC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF35_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.840e-90
Identity = 163/257 (63.42%), Postives = 179/257 (69.65%), Query Frame = 0 
Query:    1 MDSSWQLDPRVLIFPITKPPPTSWEDVSRVHGRLSRHWALIRGLIEEQKRARKNRCSSTARLSATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIHKAGDKYLVSQVTARNPKHQPPTKAFAASAAAIVVALRREANRRAAAKSTATATKATAVWFTENEVRALAAPLCEEDLTHKGDEIVLGEVENFAWCSMAHLLSENKFDCVKKKDLDENATIAKLEELGRRPVCSSPGCNANATKSVGELSERVKVATFLR 257
            MDS W LDPR+L FPITKPPPT WEDVS VHGR SRHW LIRGLIEEQK+ARKNR SS+ARL+ATLFREVVARLSLSLEAVDTKDKFSCTPGVGEM+            TARNPKHQP  K F ASAAAI+VA+R                      F E                    +   GEVENFAWCSMA+L + NKFDCV KKDLDE AT+A+L+ELG RP+CSSPGCNA ATK +G+LSERVK ATFLR
Sbjct:    1 MDSDWALDPRMLAFPITKPPPTRWEDVSCVHGRCSRHWGLIRGLIEEQKKARKNRGSSSARLTATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMV------------TARNPKHQPSNKTFVASAAAILVAMR----------------------FPEFS-----------------PDTPTGEVENFAWCSMAYLTNHNKFDCVAKKDLDEKATVAQLQELGERPICSSPGCNAYATKRMGDLSERVKPATFLR 206
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1498.3737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIK4_ECTSI1.360e-13174.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF35_9PHAE1.840e-9063.42ERCC4 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1498contigH-canaliculatus_F_contig1498:461..3742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1498.3737.1mRNA_H-canaliculatus_F_contig1498.3737.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1498 461..3742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1498.3737.1 ID=prot_H-canaliculatus_F_contig1498.3737.1|Name=mRNA_H-canaliculatus_F_contig1498.3737.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=258bp
MDSSWQLDPRVLIFPITKPPPTSWEDVSRVHGRLSRHWALIRGLIEEQKR
ARKNRCSSTARLSATLFREVVARLSLSLEAVDTKDKFSCTPGVGEMIHKA
GDKYLVSQVTARNPKHQPPTKAFAASAAAIVVALRREANRRAAAKSTATA
TKATAVWFTENEVRALAAPLCEEDLTHKGDEIVLGEVENFAWCSMAHLLS
ENKFDCVKKKDLDENATIAKLEELGRRPVCSSPGCNANATKSVGELSERV
KVATFLR*
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