prot_H-canaliculatus_F_contig14976.3736.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14976.3736.1
Unique Nameprot_H-canaliculatus_F_contig14976.3736.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length291
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14976.3736.1 vs. uniprot
Match: D7FI56_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI56_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 1.900e-94
Identity = 168/281 (59.79%), Postives = 195/281 (69.40%), Query Frame = 0 
Query:    1 MSSLAESSSDDGNMSD--YDFVDVEGA---SSDDD-TVTSSLAPPKGWSTLSLSDADGGETGAYFLASAAAAATAARGRREFISSPGSAAATCASFSPSVIKKSSTRFEPAPASAGAFSCRACDRLLRDCVECPTCHSLFCREHLVINKQNGKSPCPCEPCRPSSTDTVVAPFFTTSAQAPSAPRLHPHEAFLSNIPVQRMADAVPSKCDGCGISLSWGELALHACDQQLVPCRHKDFGCRWFGQRHEADSHAESSTCPGRLARAQRANDDLRAELAASRA 275
            MS + ESSSDDG MSD  +DFV+VEG    SSD D TVTSSLAPPKGWSTLSLSDA+  +TG   +              EFIS+P +AA+ C + +   + KSSTRFEP+  S  AFSCRAC  LLRDCVECPTCHSLFCREHLV++KQNG SPCPCEPC  +   T ++   T           HP EAFL NIP+QR+ADAVPS+CDGCGISLSWGEL  HACDQQLVPC  +  GC WFG+RHE ++H  SSTCPGRLA AQ    + R+E A  RA
Sbjct:    1 MSGMLESSSDDGCMSDHSFDFVEVEGGTSYSSDGDATVTSSLAPPKGWSTLSLSDAEAVKTGPAAVTXXXXXXXXXXXXXEFISTPIAAASFCQTAA--AVTKSSTRFEPS--SLAAFSCRACGNLLRDCVECPTCHSLFCREHLVVDKQNGTSPCPCEPCSLAPIATTLSAASTXXXXXXXRAHHHPREAFLPNIPLQRIADAVPSRCDGCGISLSWGELGRHACDQQLVPCGRRQHGCSWFGKRHEREAHEASSTCPGRLALAQAEALEARSEAARLRA 277
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14976.3736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FI56_ECTSI1.900e-9459.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..283
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 204..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14976contigH-canaliculatus_F_contig14976:1..912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14976.3736.1mRNA_H-canaliculatus_F_contig14976.3736.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14976 1..912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14976.3736.1 ID=prot_H-canaliculatus_F_contig14976.3736.1|Name=mRNA_H-canaliculatus_F_contig14976.3736.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=291bp
MSSLAESSSDDGNMSDYDFVDVEGASSDDDTVTSSLAPPKGWSTLSLSDA
DGGETGAYFLASAAAAATAARGRREFISSPGSAAATCASFSPSVIKKSST
RFEPAPASAGAFSCRACDRLLRDCVECPTCHSLFCREHLVINKQNGKSPC
PCEPCRPSSTDTVVAPFFTTSAQAPSAPRLHPHEAFLSNIPVQRMADAVP
SKCDGCGISLSWGELALHACDQQLVPCRHKDFGCRWFGQRHEADSHAESS
TCPGRLARAQRANDDLRAELAASRAEAEALEHRACSAEERA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like