prot_H-canaliculatus_F_contig1497.3735.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1497.3735.1
Unique Nameprot_H-canaliculatus_F_contig1497.3735.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length627
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1497.3735.1 vs. uniprot
Match: D8LKF5_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF5_ECTSI)

HSP 1 Score: 696 bits (1796), Expect = 2.020e-242
Identity = 447/611 (73.16%), Postives = 467/611 (76.43%), Query Frame = 0 
Query:   20 LPSSDEDFWAAVAAQVAKEGSSTTPAWRQVGVSLAPPSPRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAGGVWCELCEDKTEGRWVTRCKGGGSGSXVGSTRQQQQQACSIWVHPACAWQDEGYAMRSIAGSSRSTESGETKRRLPTVSFACPQHDKPATYCSCKREEGEDDDGAEDYIECESCNEWYHFSCEGLDEDNPPDVYSCKRCRQLAAKGQKVSAQERRRNKAKTNAYLCEMLANKVMQIQQWAKEVKVLAATDTTAAATXXXXXAAHAQ---ARYASLKELLARREELEAPLEEEENGDAETAGKGGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEESKVVPGMGGVYSEASEVLETVAEESDRAEAEVDAWFDEHPEAYYKKSDGGARLGYWKTSAAPLAAEVAQLEALVAAARSARAGPPAAVXXXEDALAAARWALKAVTLFTAVGGXXXXXXXXXXXVREGKGPGGAGLPAFAEVCALLDDAEEGMVTSADRRGKANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVAMPEYQELERVASEWEAWEVR 627
            L SSDEDFWAAVAAQVAKEGSSTTPAWRQVGV  APP+  SS                                  EA GV C LCEDK+EGRWVTRCKG G G     T  +QQQ C+IWVHPACAWQ+EGYAMRSIAGSSR T  GE KRRLPTV FACP HDKPATYCSCKREEGED+DG EDYIECESCNEWYHFSCEGLDEDNPP+ YSCKRCRQLAAKGQKV AQERRRNKAKTN YL EMLANKVMQIQQW KEVKVLAAT+T     XXXXX        ARYAS+K+LLARREELEAPLE                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  D E+ KVV GMGGVY+EAS +LE+VAEESDRAE  VD WFDEHPE YYKKSDGGARLGYWKTS +PL AEV QLE LVA+ARSARAGPPAAV   EDALAAARW LKAV L T   GX                 G AGLPAF+EV ALLD+A E M TSADRRG+ANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPV MPEY ELERVA+EWEAWE R
Sbjct:    2 LTSSDEDFWAAVAAQVAKEGSSTTPAWRQVGV--APPTSPSSGDSGHGRAGTRGKAKGPAAAASAAEV--------EAAGVCCALCEDKSEGRWVTRCKGSGGG-----TGTRQQQTCNIWVHPACAWQNEGYAMRSIAGSSRLTADGE-KRRLPTVFFACPLHDKPATYCSCKREEGEDEDGEEDYIECESCNEWYHFSCEGLDEDNPPERYSCKRCRQLAAKGQKVPAQERRRNKAKTNEYLSEMLANKVMQIQQWVKEVKVLAATNTAXXXXXXXXXXXXXXXXXARYASVKDLLARREELEAPLE-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVSPLEAEVGQLEQLVASARSARAGPPAAVAAAEDALAAARWVLKAVVLLTGGAGXA----------------GAAGLPAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVDMPEYHELERVATEWEAWESR 561
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BLAST of mRNA_H-canaliculatus_F_contig1497.3735.1 vs. uniprot
Match: A0A6H5KV96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV96_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 3.990e-70
Identity = 211/298 (70.81%), Postives = 219/298 (73.49%), Query Frame = 0 
Query:  272 MQIQQWAKEVKVLAATDTTAAATXXXXXAAHAQAR---YASLKELLARREELEAPLEEEENGDAETAGKGGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEESKVVPGMGGVYSEASEVLETVAEESDRAEAEVDAWFDEHPEAYYKKSDGGARLGYWKTSAAPLAAEVAQLEALVAAARSARAGPPAAVXXXEDALAAARWALKAVTLFTAVGGXXXXXXXXXXXVREGKGPGGAGLPAFAEVCALLDDAEEGMVTSADRRGKANTAWQHVNDIR 566
            MQIQQW KEVKVLAAT+T  A  XXXXX          YASLKELLARREELEAPL                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  D E+ KVV GMGGVY+EAS +LE+VAEESDRAE  VD WFDEHPE YYKKSDGGARLGYWKTS   L AEV QLE LVA ARSARAGPPAAV   EDALAAARW LKAV L T   G    XXXXXXX   G       LPAF+EV ALLD+A E M TSADRRG+ANTAWQHVNDIR
Sbjct:    1 MQIQQWVKEVKVLAATNTAGAXXXXXXXXXXXXXXXXXYASLKELLARREELEAPL--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVGTLEAEVGQLEKLVATARSARAGPPAAVAAAEDALAAARWVLKAVVLLTGGAGGGAPXXXXXXXXXXG-------LPAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIR 271
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1497.3735.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKF5_ECTSI2.020e-24273.16PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KV96_9PHAE3.990e-7070.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 403..430
NoneNo IPR availableCOILSCoilCoilcoord: 310..330
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 101..184
e-value: 24.0
score: 1.7
coord: 189..238
e-value: 1.7E-9
score: 47.5
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 189..239
e-value: 7.2E-7
score: 29.0
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 187..240
score: 8.992
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 181..262
e-value: 7.4E-13
score: 49.8
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 190..237
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 160..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1497contigH-canaliculatus_F_contig1497:18839..26360 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1497.3735.1mRNA_H-canaliculatus_F_contig1497.3735.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1497 18796..26360 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1497.3735.1 ID=prot_H-canaliculatus_F_contig1497.3735.1|Name=mRNA_H-canaliculatus_F_contig1497.3735.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=627bp
MAADRAQGHKPDQQQQQGQLPSSDEDFWAAVAAQVAKEGSSTTPAWRQVG
VSLAPPSPRSSSSSPSRDSGGGARAGTRGKAKGAAAAAAAAAAAEEAGGV
WCELCEDKTEGRWVTRCKGGGSGSGVGSTRQQQQQACSIWVHPACAWQDE
GYAMRSIAGSSRSTESGETKRRLPTVSFACPQHDKPATYCSCKREEGEDD
DGAEDYIECESCNEWYHFSCEGLDEDNPPDVYSCKRCRQLAAKGQKVSAQ
ERRRNKAKTNAYLCEMLANKVMQIQQWAKEVKVLAATDTTAAATDDATAA
AHAQARYASLKELLARREELEAPLEEEENGDAETAGKGGAKGNSGKGGKG
GGRGGAGGRGGQGSGGGGGGGSGGGNSSGGSDAGDFDDDGEESKVVPGMG
GVYSEASEVLETVAEESDRAEAEVDAWFDEHPEAYYKKSDGGARLGYWKT
SAAPLAAEVAQLEALVAAARSARAGPPAAVAAAEDALAAARWALKAVTLF
TAVGGGGGGGSGRGGGVREGKGPGGAGLPAFAEVCALLDDAEEGMVTSAD
RRGKANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSS
GDAVPVAMPEYQELERVASEWEAWEVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019786Zinc_finger_PHD-type_CS
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR001965Znf_PHD