prot_H-canaliculatus_F_contig14945.3724.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14945.3724.1
Unique Nameprot_H-canaliculatus_F_contig14945.3724.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length126
Homology
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.150e-34
Identity = 104/182 (57.14%), Postives = 111/182 (60.99%), Query Frame = 0
Query:    2 TLSFVSGQVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREA------------------------------GERKGKG---------------------------GAREFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            T  FV+ +VKKTAFA+GVRCASLGSRRTLCGN RVSSLKTDGKMRDACLELQKNKK XXXXXXXXXXXX X                                 G RK +G                           G REFPYRALASVRDIEELA LGK+EGTCAYYGARKAA LAQ++
Sbjct:  264 TSQFVN-EVKKTAFAKGVRCASLGSRRTLCGNERVSSLKTDGKMRDACLELQKNKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGTRKSEGEXXXXXXXXXXXXXXGTTDGCPLLAADGQREFPYRALASVRDIEELAALGKEEGTCAYYGARKAASLAQLV 444          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A6H5KJU5_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU5_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 6.670e-33
Identity = 98/181 (54.14%), Postives = 104/181 (57.46%), Query Frame = 0
Query:    2 TLSFVSGQVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXX----------------------AXREA-----------------------------GERKG-----KGGAREFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            T  FV+ +VKKTAFA+GVRCASLGSRRTLCGN RVSSLKTDGKMRDACLELQKNKK      XXXXXXX                      A R                               G   G       G REFPYRALASVRDIEELA LGK+EGTCAYYGARKAA LAQ++
Sbjct:  264 TSQFVN-EVKKTAFAKGVRCASLGSRRTLCGNERVSSLKTDGKMRDACLELQKNKKSSSKKTXXXXXXXXXXXXXXXXXXXXXXXTEPLTEAKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGTTDGCPLLAADGQREFPYRALASVRDIEELAALGKEEGTCAYYGARKAASLAQLV 443          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A835YWY4_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.950e-24
Identity = 72/140 (51.43%), Postives = 82/140 (58.57%), Query Frame = 0
Query:    2 TLSFVSGQVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXRE------AGERKG-KGGA--------REFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            T  FV+ +VKKTAFA GVRC +LG RR LC N  VSSL +D +M DACL+LQK KKK            A R        G RKG K G         REF   ALA+VRDIEEL ELG+    C YYG RKAA LAQ++
Sbjct:  245 TSQFVN-EVKKTAFAAGVRCVTLGGRRNLCINPAVSSLSSDARMTDACLDLQKGKKKASCGSSCAQPPPAKRAKQGVAAGGGRKGEKRGCEWLSVATQREFRDHALAAVRDIEELGELGRGLHACPYYGTRKAAALAQLV 383          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A5D6Y0V7_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0V7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 7.430e-15
Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 0
Query:    9 QVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREAGERKGKGGAR----------EFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            ++++TAF   VR  SLGSR+ LC N RV++L++D +M DACL++ +N               A   A   K K  A+           F   ALA+VRDIE+L +LG    TCAYYG R++  LAQV+
Sbjct:  247 EIRRTAFGARVRVVSLGSRKNLCTNPRVTALRSDAQMTDACLDMLQNSSSSK----------AKAVASRSKKKRDAKCPFYDKERLGHFRDHALAAVRDIEDLHDLGSDLTTCAYYGTRESVPLAQVV 364          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A1Y2AQU1_9FUNG (ATP-dependent DNA helicase CHL1 n=2 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2AQU1_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 1.870e-14
Identity = 50/126 (39.68%), Postives = 68/126 (53.97%), Query Frame = 0
Query:    1 STLSFVSGQVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREAGERKGKGGAREFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            S LS    ++KKT + + V+  SLGSR+ LC N +V+ L +  +M D CL+LQK+K                      K K   R+F     A+VRDIEELAELGK +G C YYG R A   +Q++
Sbjct:  203 SQLSQFISELKKTEYVETVKSLSLGSRKNLCINDQVTRLSSAPRMNDKCLDLQKDKANKCPYLP--------------KEKRPLRDFSDTINATVRDIEELAELGKAKGVCPYYGTRAALPSSQIV 314          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A015KHZ2_RHIIW (ATP-dependent DNA helicase CHL1 n=11 Tax=Rhizophagus TaxID=1129544 RepID=A0A015KHZ2_RHIIW)

HSP 1 Score: 75.5 bits (184), Expect = 2.250e-13
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 0
Query:    1 STLSFVSGQVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREAGERKGKGGAREFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            S L+    +++KT +A+ V+C SLGSR+ LC N  V  LK   ++ + CL++QK  KK              R            ++    LASVRDIEEL ++G++   C+YYG RK+ +  Q++
Sbjct:  226 SQLTQFVNELRKTVYAEDVKCVSLGSRKNLCINEEVRKLKNINRINERCLDMQKAGKKPEKRCPYIPIRDKSRML----------DYRDHVLASVRDIEELVDIGRKLNACSYYGTRKSIRQCQIV 341          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A2P4YD26_9STRA (ATP-dependent RNA helicase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YD26_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.090e-13
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 0
Query:    9 QVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREAGERKGKGGAREFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            +++KTAFA+ +R  SLGSR+ LC N +V+ L +D +M D CL++ ++ K                  G  K         Y ALA V+DIE+L  LG++  TC+YYG R++  LAQ++
Sbjct:  218 EIRKTAFAKHIRVVSLGSRKNLCTNPKVTKLNSDLRMADKCLDMMQSSKAKNAKKVGKCPFYEKELLGHYK--------DY-ALAHVQDIEDLHTLGEEMSTCSYYGTRESIPLAQIV 326          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: K3W6Y0_GLOUD (Helicase ATP-binding domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6Y0_GLOUD)

HSP 1 Score: 73.9 bits (180), Expect = 7.810e-13
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 0
Query:    9 QVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREAGERKGKGGAREFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            +++KT F   +R  SLGSR+ LC N  V+SL++D +M D CL++ +  KK                  +++  G  +++   ALA V DIEEL ELG +   C+YYG R++  LAQV+
Sbjct:  265 EIRKTVFGDHIRVVSLGSRKNLCTNPSVASLRSDLQMTDKCLDMLQGAKKQTKAAKQKKKATGKCPFYDKELLGYYKDY---ALAHVHDIEELHELGDEMSICSYYGTRESVPLAQVI 379          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A484DR37_BRELC (Helicase ATP-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR37_BRELC)

HSP 1 Score: 73.6 bits (179), Expect = 1.060e-12
Identity = 41/118 (34.75%), Postives = 64/118 (54.24%), Query Frame = 0
Query:    9 QVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREAGERKGKGGAREFPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            +++KT FA  +R  SLGSR+ LC N +VS L++D +M D CL++ ++ K                  G+         +   ALA V+DIE+L  LG+    C+YYG R++  LAQ++
Sbjct:  235 EIRKTKFANHIRVVSLGSRKNLCTNPKVSKLESDVRMTDKCLDMMQSSKTKDGKKVCKCPFYEKELLGQ---------YKNHALAHVQDIEDLHTLGEHMSVCSYYGTRESIPLAQIV 343          
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Match: A0A225WVM1_9STRA (DNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVM1_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.060e-12
Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 0
Query:    9 QVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACLELQKNKKKXXXXXXXXXXXXAXREAGERKGKGGARE------FPYRALASVRDIEELAELGKQEGTCAYYGARKAAKLAQVL 126
            +++KTAFA+ VR  SLGSR+ LC N +V+ L +D +M D CL++ ++ K                + G ++GK    E      +   AL  V+DIE+L  LG++  TC+YYG R++  LAQ++
Sbjct:  218 EIRKTAFAEHVRVVSLGSRKNLCTNPKVTKLNSDLRMTDKCLDMMQSSKT---------------KNGRKQGKCPFYEKELLGLYKDYALVHVQDIEDLHTLGEEMSTCSYYGTRESIPLAQIV 326          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14945.3724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPY7_ECTSI1.150e-3457.14Helicase ATP-binding domain-containing protein n=1... [more]
A0A6H5KJU5_9PHAE6.670e-3354.14Helicase ATP-binding domain-containing protein n=1... [more]
A0A835YWY4_9STRA6.950e-2451.43Helicase C-terminal domain-containing protein n=1 ... [more]
A0A5D6Y0V7_9STRA7.430e-1539.84Helicase ATP-binding domain-containing protein n=1... [more]
A0A1Y2AQU1_9FUNG1.870e-1439.68ATP-dependent DNA helicase CHL1 n=2 Tax=Rhizoclosm... [more]
A0A015KHZ2_RHIIW2.250e-1334.13ATP-dependent DNA helicase CHL1 n=11 Tax=Rhizophag... [more]
A0A2P4YD26_9STRA4.090e-1337.29ATP-dependent RNA helicase (Fragment) n=1 Tax=Phyt... [more]
K3W6Y0_GLOUD7.810e-1337.29Helicase ATP-binding domain-containing protein n=1... [more]
A0A484DR37_BRELC1.060e-1234.75Helicase ATP-binding domain-containing protein n=1... [more]
A0A225WVM1_9STRA1.060e-1236.29DNA helicase n=1 Tax=Phytophthora megakarya TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010614DEAD2PFAMPF06733DEAD_2coord: 9..125
e-value: 1.4E-15
score: 57.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..126
e-value: 4.9E-15
score: 57.4
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 2..125
IPR028331ATP-dependent RNA helicase CHL1/DDX11PANTHERPTHR11472:SF41ATP-DEPENDENT DNA HELICASE DDX11-RELATEDcoord: 2..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14945contigH-canaliculatus_F_contig14945:1377..2218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14945.3724.1mRNA_H-canaliculatus_F_contig14945.3724.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14945 1377..2218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14945.3724.1 ID=prot_H-canaliculatus_F_contig14945.3724.1|Name=mRNA_H-canaliculatus_F_contig14945.3724.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=126bp
STLSFVSGQVKKTAFAQGVRCASLGSRRTLCGNGRVSSLKTDGKMRDACL
ELQKNKKKKEKGKDRGKSKKAKREAGERKGKGGAREFPYRALASVRDIEE
LAELGKQEGTCAYYGARKAAKLAQVL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028331CHL1/DDX11
IPR010614DEAD_2