prot_H-canaliculatus_F_contig1483.3660.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1483.3660.1
Unique Nameprot_H-canaliculatus_F_contig1483.3660.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length449
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1483.3660.1 vs. uniprot
Match: D7G2P0_ECTSI (SnoaL-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P0_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 1.130e-109
Identity = 295/461 (63.99%), Postives = 328/461 (71.15%), Query Frame = 0 
Query:    1 SDFKPTDVRIRVRGTTAIVQCNEKVTTRLPSAGDAFS-------------RS-SSXXXXXXXXXXXXXXXXKADGSDGFSTDPNHKDAAAWLAHVIADSPYEPGSEQSIVSNPTTAEDRAKIKKAVGEHGVASIKKAVDTAFAQTDESARGGSLAGGRGKXXXXXXXXXXXXXXXXXXXRKKVKPRFLNATNIYRKAGGRWLMVHXXXXXXXXXXXSNDRRAAMGMDGLKDGMEGMTRIVNLSDLGAGGFGGSIGGGKENKLXXXXXXXXXXXXXXXXXXXXXSGAERCVLASGMIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDHDVGSSASTSTSMEGKERRDSRWSKDELPLTEDLTKKTIQQTLRTLVEIKVLEKDEQRRLMTDVIQHATGEEASPVEVAYELLLAHTNEDLEDTDSLAEFVDQCKILAASLFEEDAKKTKKRRWR 447
            S  KPTDVRIRVRGTTAIVQCNE+VT+R  +                   RS S XXXXXXXXXXXXXXXX       F  DP HKD AAWLAHVI+++PYEPGSE+SIVSNPTT EDRA+IKKAVG+HG ASIKKAV  AFAQ+DE  R  +LA    K      XXXXX        R K+KPR LN TNIYRKAGG+WLMVH            + RR AMG+DGLKDG+EGM RI+NLS+ G GGF       K+N+L       XXXXXXXXXXXX  +GA R   + GMII   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                EGK    SRW ++ELPLTEDLTKKTIQ TLRTLVEIKVLEKDEQRRL+TDVI+HA  +EAS VEVAYELLLAHTNEDLEDTD+LAEFVDQCK++A+SLFE+D K+ KKRRWR
Sbjct:   56 SVIKPTDVRIRVRGTTAIVQCNEEVTSRQNAXXXXXXXXXXXXXXXXXXXRSFSXXXXXXXXXXXXXXXXXXXXXXXXFGDDPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSXXXXXSER-----RSKIKPRVLNVTNIYRKAGGKWLMVHHHASLPPTGKSGSSRRVAMGIDGLKDGLEGMPRIINLSEQG-GGFXXXXXXXKDNRLEEMLEALXXXXXXXXXXXXGGTGAGR-TPSGGMIIIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXEGK---GSRWRREELPLTEDLTKKTIQ-TLRTLVEIKVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFEDD-KRRKKRRWR 497
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BLAST of mRNA_H-canaliculatus_F_contig1483.3660.1 vs. uniprot
Match: A0A6H5L954_9PHAE (UVR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L954_9PHAE)

HSP 1 Score: 314 bits (805), Expect = 6.650e-97
Identity = 264/458 (57.64%), Postives = 300/458 (65.50%), Query Frame = 0 
Query:   13 RGTTAIVQCNEKVTTRLPSAGDAFS-----RSSSXXXXXXXXXXXXXXXXKADGSDGFSTDPNHKDAAAWLAHVIADSPYEPGSEQSIVSNPTTAEDRAKIKKAVGEHGVASIKKAVDTAFAQTDESAR-----------GGSLAGGRGKXXXXXXXXXXXXXXXXXXXRKKVKPRFLNATNIYRKAGGRWLMVHXXXXXXXXXXXSNDRRAAMGMDGLKD-------GMEGMTRIVNLSDLGAGGFGGSIGGGKENKLXXXXXXXXXXXXXXXXXXXXXSGAERCVLASGMIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDHDVGSSASTSTSMEGKERRDSRWSKDELPLTEDLTKKTIQQTLRTLVEIKVLEKDEQRRLMTDVIQHATGEEASPVEVAYELLLAHTNEDLEDTDSLAEFVDQCKILAASLFEEDAKKTKKRRWR 447
            R ++++++CNE+VT+R  +A  A +     RS S                  DGS  F  +P HKD AAWLAHVI+++PYEPGSE+SIVSNPTT EDRA+IKKAVG+HG ASIKKAV  AFAQ+DE  R           G  L+GGRG                    R KVKPR LN TNIYRKAGG+WLMVH            + RR AMG+DGLKD        +EGM RI+NLSD G GGF            XXXXXXXXXXXXXXXXXXX  +GA R      +II     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 G     SRW ++ELPLTEDLTKKTIQ TLRTLVEIKVLEKDEQRRL+TDVI+HA  +EAS VEVAYELLLAHTNEDLEDTD+LAEFVDQCK++A+SLFEED K+ KKRRWR
Sbjct:  247 RFSSSVIKCNEEVTSRQNAAAAAAATDPTLRSFSPAPSALSSFGSSSKAADDDGSSSFGDNPKHKDPAAWLAHVISENPYEPGSEKSIVSNPTTPEDRARIKKAVGKHGAASIKKAVAAAFAQSDEETRLANLAKRSKKGGAFLSGGRG----------------GSERRSKVKPRVLNVTNIYRKAGGKWLMVHHHASLPPMGKSGSSRRVAMGIDGLKDVRAGAVVALEGMPRIINLSDQG-GGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTGAGRTPSGGMIIIGGGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----SRWRREELPLTEDLTKKTIQ-TLRTLVEIKVLEKDEQRRLVTDVIKHAADDEASAVEVAYELLLAHTNEDLEDTDTLAEFVDQCKVIASSLFEED-KRRKKRRWR 680
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BLAST of mRNA_H-canaliculatus_F_contig1483.3660.1 vs. uniprot
Match: A0A836CFM1_9STRA (SnoaL-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM1_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.170e-9
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 0 
Query:  355 DLTKKTIQQTLRTLVEIKVLEKDEQRRLMTDVIQHATGEEASPVEVAYELLLAHTNEDLEDTDSLAEFVDQCKIL 429
            +L +KT+   LR L     L + E+ +L+TDVI+HA GEEAS  E+AYELLLAH NED+ D   + +FVDQCK L
Sbjct:  294 NLARKTVD-ALRRLGREGRLNQREKAQLITDVIKHAAGEEASMAEIAYELLLAHDNEDMADQGRVEDFVDQCKAL 367
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1483.3660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2P0_ECTSI1.130e-10963.99SnoaL-like domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L954_9PHAE6.650e-9757.64UVR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CFM1_9STRA2.170e-953.33SnoaL-like domain-containing protein n=1 Tax=Tribo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037401SnoaL-like domainPFAMPF13474SnoaL_3coord: 171..198
e-value: 1.3E-4
score: 22.2
NoneNo IPR availableGENE3D3.10.450.50coord: 147..209
e-value: 1.0E-9
score: 40.2
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 161..198
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 286..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1483contigH-canaliculatus_F_contig1483:21691..26301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1483.3660.1mRNA_H-canaliculatus_F_contig1483.3660.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1483 21691..26301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1483.3660.1 ID=prot_H-canaliculatus_F_contig1483.3660.1|Name=mRNA_H-canaliculatus_F_contig1483.3660.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=449bp
SDFKPTDVRIRVRGTTAIVQCNEKVTTRLPSAGDAFSRSSSSSSSSSPLS
SLSPSSSKADGSDGFSTDPNHKDAAAWLAHVIADSPYEPGSEQSIVSNPT
TAEDRAKIKKAVGEHGVASIKKAVDTAFAQTDESARGGSLAGGRGKKKRA
ASAAAAAAAVAAVGRRKKVKPRFLNATNIYRKAGGRWLMVHHHASLPPPP
KTSNDRRAAMGMDGLKDGMEGMTRIVNLSDLGAGGFGGSIGGGKENKLEE
MLEALRNRLPGALGGSIGGSGAERCVLASGMIIIGGDDDEDDDDDEEEED
DDEDDDDDDDDEDDDDDDEGDDHDVGSSASTSTSMEGKERRDSRWSKDEL
PLTEDLTKKTIQQTLRTLVEIKVLEKDEQRRLMTDVIQHATGEEASPVEV
AYELLLAHTNEDLEDTDSLAEFVDQCKILAASLFEEDAKKTKKRRWRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR032710NTF2-like_dom_sf
IPR037401SnoaL-like