prot_H-canaliculatus_F_contig145.3490.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig145.3490.1
Unique Nameprot_H-canaliculatus_F_contig145.3490.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length220
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig145.3490.1 vs. uniprot
Match: D7FWR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR7_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.980e-40
Identity = 115/231 (49.78%), Postives = 130/231 (56.28%), Query Frame = 0 
Query:    1 ETSRPPFVDSRDVKRMLACPAEEMHLFSDPKNYRTRARYTRLALPLREIEGRIQDTIASHVRLEYRDKLKETLGTADGTASGVDRGEPEGMGTYSSTVAHAAP--------KLVNHAAAEQQKQQQQAHTATSDQGVSIKPNSCNKRRASVVFARGAV--TAPAFQPPASLRQ--QDREPATAATMELVSRAQASTATATVGTAGEGGRWQPRRGGVAMVVPTSTRNAVAA 219
            ETSRPP VDSRDVKRML CPAEEMH+FSDP NYRTR RYTRLALP REI G IQDTIAS+VR EYRDKLKE LG  D   SG+ + EP     YSS     A         K    AAA+Q +QQQQA TA           + NK RASV F  GA   T P  Q  A++       +P  A    L  +   + A A   +A +G  W+  R G AM VP  T  A AA
Sbjct:  996 ETSRPPLVDSRDVKRMLECPAEEMHMFSDPMNYRTRPRYTRLALPFREIGGIIQDTIASNVRSEYRDKLKEALGPTDARESGIHQQEP-----YSSPAGAFAEDTNTGWVHKDATAAAAQQPRQQQQAPTAEHAH------KNSNKTRASVNFDTGAAATTTPPHQQRAAVGMLAAGHKPTPAV---LAPQTATAVAAAASRSAVQGRAWRSGRDGAAMAVPMMTAKATAA 1212
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig145.3490.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWR7_ECTSI1.980e-4049.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig145contigH-canaliculatus_F_contig145:52315..53572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig145.3490.1mRNA_H-canaliculatus_F_contig145.3490.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig145 52315..53572 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig145.3490.1 ID=prot_H-canaliculatus_F_contig145.3490.1|Name=mRNA_H-canaliculatus_F_contig145.3490.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=220bp
ETSRPPFVDSRDVKRMLACPAEEMHLFSDPKNYRTRARYTRLALPLREIE
GRIQDTIASHVRLEYRDKLKETLGTADGTASGVDRGEPEGMGTYSSTVAH
AAPKLVNHAAAEQQKQQQQAHTATSDQGVSIKPNSCNKRRASVVFARGAV
TAPAFQPPASLRQQDREPATAATMELVSRAQASTATATVGTAGEGGRWQP
RRGGVAMVVPTSTRNAVAA*
back to top