prot_H-canaliculatus_F_contig14429.3454.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig14429.3454.1
Unique Name	prot_H-canaliculatus_F_contig14429.3454.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	412

Homology

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BLAST of mRNA_H-canaliculatus_F_contig14429.3454.1 vs. uniprot
Match: D7FYE5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYE5_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.140e-20
Identity = 175/401 (43.64%), Postives = 188/401 (46.88%), Query Frame = 0

Query:    1 SRVGVRKTSSQELECRLCEQTFVEELLESVVGTTALEAGSMNGQPSAHAAGART----------------GGXXXXXEGGTPQGLQMPMIGVPFSMLQALGMGGLQPMNTRPTASTGAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRASEGARAAGPFLFGGRFAMGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSFSSRVRRFRQGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDAESPFLGTLLQALGGAGGGHAEIFIGPNMQRVPAVGGGG 385
            SRVGVRKTS++ELECR CEQTFVEELLESVVG  AL  G ++                            G       GGTP G   P+IG+PFSMLQALG+GG+ P+N RP A  G                             XXXXXXXX    EG RA GPFLFGGRFAMGSG XXXXXXXXXXXXXXXXXXXXXX                +SFSSRV+RFRQ            XXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                            LDAE+PFLGTLLQALGGAG  HAEIFIGPNMQR+     GG
Sbjct:   19 SRVGVRKTSTEELECRRCEQTFVEELLESVVGNAAL--GGIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGRRGTRGGTP-GQGAPVIGMPFSMLQALGVGGMHPLNARPAAPGG-------------------DRGEGEGGEQXXXXXXXXXXXXEGGRA-GPFLFGGRFAMGSGGXXXXXXXXXXXXXXXXXXXXXXGG--------------SSFSSRVQRFRQAHAGPQTPRARQXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------------------------------------------------------LDAENPFLGTLLQALGGAGAEHAEIFIGPNMQRMSGAARGG 290

[Close]

BLAST of mRNA_H-canaliculatus_F_contig14429.3454.1 vs. uniprot
Match: A0A6H5JIQ8_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ8_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.040e-5
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0

Query:    1 SRVGVRKTSSQELECRLCEQTFVEELLESVVGTTAL 36
            +RV VRKTS+QELECR CEQTFVEELLE+VVG  AL
Sbjct:   19 TRVRVRKTSTQELECRRCEQTFVEELLEAVVGNAAL 54

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig14429.3454.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig14429.3454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FYE5_ECTSI	1.140e-20	43.64	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JIQ8_9PHAE	3.040e-5	80.56	RING-type domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01228	EGGSHELL	coord: 249..267 score: 34.87 coord: 188..203 score: 60.16 coord: 123..134 score: 40.62 coord: 213..223 score: 30.68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig14429	contig	H-canaliculatus_F_contig14429:1..2469 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig14429.3454.1	mRNA_H-canaliculatus_F_contig14429.3454.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig14429 1..2469 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig14429.3454.1 ID=prot_H-canaliculatus_F_contig14429.3454.1|Name=mRNA_H-canaliculatus_F_contig14429.3454.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=412bp
SRVGVRKTSSQELECRLCEQTFVEELLESVVGTTALEAGSMNGQPSAHAA
GARTGGGGGGGEGGTPQGLQMPMIGVPFSMLQALGMGGLQPMNTRPTAST
GAPAAAPAPAPAGGQGRDANGGRGGSGGGSGDGGSGSGRRASEGARAAGP
FLFGGRFAMGSGGSSSSSSSSSSSSGGGGSGTTVGDDGGGGGGGGGGGGG
GNSFSSRVRRFRQGSGGSTSNTGSNTSRTSAAGASGGDTSSASSSGSSGS
GSGRAGAAGSTAAGSSARAGLTRSGARRGSAAAAAAAAAAATAAPAAGRA
QGGRRQGQAAAAGVAATGGSGRAGSEGARGAGAAAAGGRGGGGGLDAESP
FLGTLLQALGGAGGGHAEIFIGPNMQRVPAVGGGGGGGDGGVGGGEGGGM
PDIGGGIAAMLG