prot_H-canaliculatus_F_contig14375.3424.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14375.3424.1
Unique Nameprot_H-canaliculatus_F_contig14375.3424.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length165
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14375.3424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 146..165
e-value: 1.8E-5
score: 24.5
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 140..165
score: 12.296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14375contigH-canaliculatus_F_contig14375:1824..2318 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14375.3424.1mRNA_H-canaliculatus_F_contig14375.3424.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14375 1734..2318 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14375.3424.1 ID=prot_H-canaliculatus_F_contig14375.3424.1|Name=mRNA_H-canaliculatus_F_contig14375.3424.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=165bp
MAKAIVSVARQGVPRDPATATAARDRVDALGRAFHDVLQLLEQHARDHCA
AIQLLRNRSLFSGLLDKDTKVWARAVTTLFDSLARTAPLLPSMILPASPL
PCFPHFRANLNGGGLINASAVHAVPTSQPSPRSDRGDRGDRCGRMCRQWL
RDGTCRFESRCTFQH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH