prot_H-canaliculatus_F_contig1429.3366.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1429.3366.1
Unique Nameprot_H-canaliculatus_F_contig1429.3366.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length115
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1429.3366.1 vs. uniprot
Match: D7FK74_ECTSI (Similar to ubiquitin specific protease 34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK74_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.490e-20
Identity = 42/58 (72.41%), Postives = 52/58 (89.66%), Query Frame = 0 
Query:   56 MSMAVFEDDRWLNLMSAGRMQELLPVIDRIRTAMVDATFNSSSVDERARHHFMTHTLP 113
            M+M +F+DDRWL+LMS GRMQ+LLP+IDRI+ AMV +TFNSS+ +ERARHHF THTLP
Sbjct:    1 MNMTIFDDDRWLHLMSVGRMQQLLPIIDRIQAAMVASTFNSSADNERARHHFATHTLP 58
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1429.3366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK74_ECTSI1.490e-2072.41Similar to ubiquitin specific protease 34 n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1429contigH-canaliculatus_F_contig1429:21327..21671 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1429.3366.1mRNA_H-canaliculatus_F_contig1429.3366.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1429 21327..21771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1429.3366.1 ID=prot_H-canaliculatus_F_contig1429.3366.1|Name=mRNA_H-canaliculatus_F_contig1429.3366.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=115bp
ARQIRKVVSNRGRTKRPRARSILRRVHPSRAPWLQALPAYAGGILRRRSR
RGWQEMSMAVFEDDRWLNLMSAGRMQELLPVIDRIRTAMVDATFNSSSVD
ERARHHFMTHTLPW*
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