prot_H-canaliculatus_F_contig1410.3248.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1410.3248.1
Unique Nameprot_H-canaliculatus_F_contig1410.3248.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length544
Homology
BLAST of mRNA_H-canaliculatus_F_contig1410.3248.1 vs. uniprot
Match: A0A6H5KHJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ1_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 7.220e-113
Identity = 256/563 (45.47%), Postives = 317/563 (56.31%), Query Frame = 0
Query:    3 KTQPDKDLSFQELERIAEGLSMTDEQQRAFMLKASMKKLSSTTALPKRAPRDRVKEAIDERVFASEKGFMQNSSAFKSRMKLGSGVQFDSNGFPAVDEDDPVILAAKKRTKEEQK------FEGVTFPSLPDCPRCSTPTIEEELSQFGMCSQCKAQEISSKAYNGPQTPSKYTYDNGDAPFSSSWRSPSPGIIKGGDSPATGGTATQVNRGEASSAPITPVAATAYLSSASSSRKRKVGELPLPGPVDNTTGVATPLPPASSSTGADGRDELAGGAGVPLQKGESKSGNSRSSGGKGSD-NLGHSSAPSLAPKIATLPNLTNVSPGLRDGGSISRVRARTADRASTSDSGEAITVASNANTIG-----TEPKIEARMAAAKKGRNQGKRGEGXXXXXXXXXXXXXXISSSTRGADSAEIAVRKLSLEVSELRTQLTINRAALARIENMSGRPVAAPVGRASGAG----------DYXXXXXXXXXXXXRKELSGVLDKVGDAAVNPPRGRGGDTEVIQNLNLEVAELRSQLESARKETALTRSALRRLQDDIDGLRKSVARR 543
            KT  DKDLSFQEL+RI E L+M+DEQQRAFML+ASMKKLS+ + LPKR P DRVKE ++ERVFASEKGF+QNS+ FK++MK+GS V FDS G P  DE DPVI AA++ TK  Q+       EG+TFPSLPDCPRCS PT E+ELS+F MCSQCKAQ+ISSKAY GPQ  SKYTYDNGDAPFSSSW SP P    GG S  +G TA  + +  +                                P+D     A P P   S    + R E   GA  PL+KG    GN RS+ G  S  NLG+S+  ++ P  AT    T  +  +R  G+   +   TA  A+ +++    +  S+   +G       P      A A KG      G                    T+G   AE+AVRKLSLEV+ELRT L INR+ LAR+E MS +   AP     G G          D             R +LS V+DKV D++V PPRGRGGD+EV+Q +          L++ARKETALTRSALRRLQ ++D L+K  A R
Sbjct:  159 KTIDDKDLSFQELQRITEELNMSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSYGLPVADERDPVIQAARETTKANQRAAEKSGVEGITFPSLPDCPRCSMPTTEDELSRFDMCSQCKAQDISSKAYAGPQMASKYTYDNGDAPFSSSWTSPGPPSTNGGASTESGKTAEVLPQKLSEEXXXXXXXX----------XXXXXXXXXXSAPIDPRR--ADPPPSWPSGDNDNDRGEAPTGAAGPLRKGN---GNLRSTTGSRSHRNLGNSAPDAITPPSATATGSTVAAASVRRHGTPGALPRPTAAAAAPAENTAVDSKRSSNTKVGGGSDIISPAPGPFAARASKG------GAVSRDRPRGGGSDGDVSLGDTKGNGRAEVAVRKLSLEVAELRTLLGINRSTLARVETMS-KSATAPQTTTEGRGTASNNEVQRRDTAVQKLARDVAELRAQLSTVVDKVSDSSVTPPRGRGGDSEVVQTMXXXXXXXXXXLDNARKETALTRSALRRLQGEVDVLQKKSAGR 699          
BLAST of mRNA_H-canaliculatus_F_contig1410.3248.1 vs. uniprot
Match: D7FVK9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK9_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 4.310e-106
Identity = 243/542 (44.83%), Postives = 299/542 (55.17%), Query Frame = 0
Query:   24 MTDEQQRAFMLKASMKKLSSTTALPKRAPRDRVKEAIDERVFASEKGFMQNSSAFKSRMKLGSGVQFDSNGFPAVDEDDPVILAAKKRTKEEQK------FEGVTFPSLPDCPRCSTPTIEEELSQFGMCSQCKAQEISSKAYNGPQTPSKYTYDNGDAPFSSSWRSPSPGIIKGGDSPATGGTATQVNRGEASSAPITPVAATAYLSSASSSRKRKVGELPLPGPVDNTTGVATPLPPASSSTGADGRDELAGGAGVPLQKGESKSGNSRSSGGKGSD-NLGHSSAPSLAPKIATLPNLTNVSPGLRDGGSISRVRARTADRASTSDSGEAITVASNANTIGTEPKIEARM-----AAAKKGRNQGKRGEGXXXXXXXXXXXXXXISSSTRGADSAEIAVRKLSLEVSELRTQLTINRAALARIENMSGRPVAAPVGRASGAG----------DYXXXXXXXXXXXXRKELSGVLDKVGDAAVNPPRGRGGDTEVIQNLNLEVAELRSQLESARKETALTRSALRRLQDDIDGLRKSVARR 543
            M+DEQQRAFML+ASMKKLS+ + LPKR P DRVKE ++ERVFASEKGF+QNS+ FK++MK+GS V FDS+G P  DE DP+I AA++ TK  Q+       E +TFPSLPDCPRCS PT E+ELS+F MCSQCKAQEI+SKAY GPQ  SKYTYDNGDAPFSSSW SP P        P T G                                          P+D T     P   +      D  +   G +  PL+KG    GN RS+ G GS  NLG+S+  +++P  AT    T  +   R  G         A  A+ +D+    T  S+   +G      +R      A A KG      G                 S  T+G D AE+AVRKLSLEV+ELRT L INR+ALAR+E MS +   AP     G G          D             R +LS V+DKV D+AV PP GRGGD+EV+Q +  E+AELRSQL++ARKET LTRSALRRLQ ++D L+K  A R
Sbjct:    1 MSDEQQRAFMLQASMKKLSAASRLPKRPPPDRVKEVLNERVFASEKGFLQNSADFKNKMKVGSRVNFDSHGLPVADERDPIIQAARETTKANQRAAEKSGVEAITFPSLPDCPRCSMPTTEDELSRFEMCSQCKAQEITSKAYAGPQMASKYTYDNGDAPFSSSWTSPVP--------PKTNGXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXAAPID-TRRAGAPSTWSYGDNDNDRGESPTGASAGPLRKGN---GNLRSTTGSGSHRNLGNSAPDTVSPPSATATGSTVAAASFRGDGVPGAFPRAAATAAAPADNTVVDTKRSSNAKVGGGSDNFSRAPGPFAARASKG------GAVSRDRPRGGGSDGGVSSGETKGNDRAEVAVRKLSLEVAELRTLLGINRSALARVETMS-KSAKAPQPTTEGRGAASNNEDQRRDTAVRKLARDVAELRAQLSTVVDKVSDSAVTPPSGRGGDSEVVQTMKREMAELRSQLDNARKETTLTRSALRRLQGEVDVLQKKFAGR 520          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1410.3248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHJ1_9PHAE7.220e-11345.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVK9_ECTSI4.310e-10644.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 498..532
NoneNo IPR availableCOILSCoilCoilcoord: 459..479
NoneNo IPR availableCOILSCoilCoilcoord: 405..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1410contigH-canaliculatus_F_contig1410:8311..12370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1410.3248.1mRNA_H-canaliculatus_F_contig1410.3248.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1410 7333..13386 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1410.3248.1 ID=prot_H-canaliculatus_F_contig1410.3248.1|Name=mRNA_H-canaliculatus_F_contig1410.3248.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=544bp
MKKTQPDKDLSFQELERIAEGLSMTDEQQRAFMLKASMKKLSSTTALPKR
APRDRVKEAIDERVFASEKGFMQNSSAFKSRMKLGSGVQFDSNGFPAVDE
DDPVILAAKKRTKEEQKFEGVTFPSLPDCPRCSTPTIEEELSQFGMCSQC
KAQEISSKAYNGPQTPSKYTYDNGDAPFSSSWRSPSPGIIKGGDSPATGG
TATQVNRGEASSAPITPVAATAYLSSASSSRKRKVGELPLPGPVDNTTGV
ATPLPPASSSTGADGRDELAGGAGVPLQKGESKSGNSRSSGGKGSDNLGH
SSAPSLAPKIATLPNLTNVSPGLRDGGSISRVRARTADRASTSDSGEAIT
VASNANTIGTEPKIEARMAAAKKGRNQGKRGEGGGSGSGGGGGGDDDISS
STRGADSAEIAVRKLSLEVSELRTQLTINRAALARIENMSGRPVAAPVGR
ASGAGDYAIRKLTRDVAEVRKELSGVLDKVGDAAVNPPRGRGGDTEVIQN
LNLEVAELRSQLESARKETALTRSALRRLQDDIDGLRKSVARR*
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