prot_H-canaliculatus_F_contig14082.3227.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14082.3227.1
Unique Nameprot_H-canaliculatus_F_contig14082.3227.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length254
Homology
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BLAST of mRNA_H-canaliculatus_F_contig14082.3227.1 vs. uniprot
Match: A0A6H5JIA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA0_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.230e-9
Identity = 66/183 (36.07%), Postives = 82/183 (44.81%), Query Frame = 0 
Query:    1 RALIVEGLSCLAGKVRVETGRGGNXXXXXXXXXXXXXXXASSPSRRRRPKSPPRFSLQGNGAAAGDSQQGAGNPMANFDARVGGR-EPREAGPAP----LSARELSQPPAFAQESEFSPGKLEVGHL-GGLGSSLPPSHAAVNGFLDGRTFSPATAVEDAEGVGV-GTGEVDRWRSECAELAQ 176
            RAL++EGL+CLAGKVRVET RG                   SPS RRR +S    S  G    A +     G  +    +R GG  + R   PA      S R LS P     E EF  G+LEV HL G L  SLP S   + G  +   F PA   E  +   +    +V RW +E A L +
Sbjct:  140 RALVIEGLACLAGKVRVETARGNKANGRGTWSSTIRATRGLSPSPRRRTQST--HSSVGETGVASEE----GKMLQGVISRDGGDGDTRMLAPASEPDFSSLRTLSLPRVLTPEGEFPAGRLEVEHLRGSLEPSLPSSPITLTGSTNDNMFPPAPTPEKTKDRNLRAESKVGRW-AESARLTE 315
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14082.3227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIA0_9PHAE1.230e-936.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14082contigH-canaliculatus_F_contig14082:132..1080 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14082.3227.1mRNA_H-canaliculatus_F_contig14082.3227.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14082 132..1395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14082.3227.1 ID=prot_H-canaliculatus_F_contig14082.3227.1|Name=mRNA_H-canaliculatus_F_contig14082.3227.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=254bp
RALIVEGLSCLAGKVRVETGRGGNANSNGLGLSRSNASHASSPSRRRRPK
SPPRFSLQGNGAAAGDSQQGAGNPMANFDARVGGREPREAGPAPLSAREL
SQPPAFAQESEFSPGKLEVGHLGGLGSSLPPSHAAVNGFLDGRTFSPATA
VEDAEGVGVGTGEVDRWRSECAELAQSTGRQGREQPLRGGYAGGGRNSGG
GAEHRSSRKVPRGPSTRVAPDAAKARQHPSPEAPPGQAQPATKSFTTKAQ
PTS*
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