prot_H-canaliculatus_F_contig14005.3187.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig14005.3187.1
Unique Nameprot_H-canaliculatus_F_contig14005.3187.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length361
Homology
BLAST of mRNA_H-canaliculatus_F_contig14005.3187.1 vs. uniprot
Match: A0A6H5KZS0_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS0_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 1.090e-31
Identity = 153/386 (39.64%), Postives = 188/386 (48.70%), Query Frame = 0
Query:    1 MHSDETI-DVFSPFWAFPGAHGHLGSAVDTHN-------NDKPSKPDVGGAAVXXXXXXXXXXXXXKEMGAVEHRM-EN---DIMDVGGGLSFGGLAGEVEQIADNVDGFLDDFLALGG------------GADGE----IAEEDLCWLEEMDPTAFLPXXXXXXXXXXXVAAGRD-DRLPSPAHEIKLTVPLVAEVAEGGEARWTPAAPAPV---------------LAAAPVPAGGPAIAAVG-VTPSSAGTPAASAPVGS-DTNGVNGESVQEGFPVVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRRQKVERYLEKRKRRRWSKVSSYQSRQRVANARPRHKGRFLPLESEFVPIAELQRRQRNLVKEMRDKAAA 340
            MH DETI ++++PF A  GAH  L   VD+         N+  S+   GG +                +   E+   EN   D MDVG  +S  G       IADNVDGFLD+F+AL G            G +GE    I+EE L +L +MD   FLP                   R PS  HEI++   +VA    GG                           +  +PV  GG  ++ VG V+P  +   AA A V      GVN +           XXXXXXXXXXXXXX                 Q+RRQKV RYL K++RRRWSK S YQSRQRVAN+RPRHKGRFLPLESEFVPIAE+QRRQR L+ +MR+KAAA
Sbjct:    1 MHDDETIINMYAPFRACSGAHRPLKGTVDSSRRKINAGGNNGNSEVGAGGGSTATVPAAGTLCKNKNSIIITENESGENKQLDSMDVGLNVSGEG------DIADNVDGFLDEFIALAGDDDYGDSMMLEEGCEGEGGAAISEEGLAYLADMDLADFLPAGSAKGASNAGTGXXXXAPRSPSSDHEIEILPDIVA----GGXXXXXXXXXXXXXXXXXXXXXXXXXGGVMGSPVAGGGAEVSGVGDVSPIRSVAAAAVAAVEVVAAPGVNADGXXXXXXXX--XXXXXXXXXXXXXXDWDGGDDDADAIVSLKEQVRRQKVARYLAKKQRRRWSKASCYQSRQRVANSRPRHKGRFLPLESEFVPIAEVQRRQRVLMAQMREKAAA 374          
BLAST of mRNA_H-canaliculatus_F_contig14005.3187.1 vs. uniprot
Match: A0A6H5KKD0_9PHAE (CCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD0_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.110e-29
Identity = 171/366 (46.72%), Postives = 200/366 (54.64%), Query Frame = 0
Query:    1 MHSDETIDVFSPFWAFPGAHGHLGSAVDTHNNDKPSKPDVGGAAVXXXXXXXXXXXXXKEMGAVEHRMENDIMDVGGGLSFGGLAGEVEQIADNVDGFLDDFLALGGGADG----------------EIAEEDLCWLEEMDPTAFLPXXXXXXXXXXXVAAGRDDRL--PSPAHEIKLTVPLVAEVAEGGEARWTPAAPAPVLAAAPVPAGGPAIAAVGVTPSSAGTPA--ASAPVGSDTNGVNGESVQEGFPVVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRRQKVERYLEKRKRRRWSK--VSSYQSRQRVANARPRHKGRFLPLESEFVPIAELQRRQRNLVKEMRDKAAALART 344
            MH DETI + +PFWAF GAH  +  +  T N     K +      XXXXXXXXXXXXX                 G  +  GG  G+   IADNVDGFLD+F+ L GG D                  I+EEDL +L +MD   FLP           + A   D L  PS  HE++ T+P     ++GG         +PV+ AA     GPA                 A AP G +T+G               XXXXXXXXXXXXXXXXXXXXXXXXXX     Q+RRQKV RYL K++RR WSK   SSYQSRQRVAN+RPRHKGRFLPLESEFVPIAELQRRQR L+ +MR+KAAA A T
Sbjct:    1 MHDDETIGMHAPFWAFSGAHRPVEES--TVNGGSGRKTNSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDVVVGGHDGD---IADNVDGFLDEFMVLAGGNDDGNDYGMXXXXXXXXXPAISEEDLVFLADMDLADFLPPA---------ITAEEGDALLSPSSVHEME-TLP-----SQGGRVA------SPVMTAAAEATLGPAXXXXXXXXXXXXXXXXXAVAP-GVETDGRGAARXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXISPKEQVRRQKVARYLAKKQRRCWSKPAASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRQRALMVQMREKAAASAAT 333          
BLAST of mRNA_H-canaliculatus_F_contig14005.3187.1 vs. uniprot
Match: D8LIC1_ECTSI (CCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIC1_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 6.600e-26
Identity = 152/359 (42.34%), Postives = 180/359 (50.14%), Query Frame = 0
Query:    1 MHSDETIDVFSPFWAFPGAHGHLG-SAVDTHNNDKPSKPDVGGAAVXXXXXXXXXXXXXKEMGAVEHRMENDIMDVGGGLSFGGLAGEVEQIADNVDGFLDDFLALGGGADGE--------------IAEEDLCWLEEMDPTAFLPXXXXXXXXXXXVAAGRDDRLPSPAHEIKLTVPLVAEVAEGGEARWTPAAPAPVLAAAPVPAGGPAIAAVGVTPSSAGTPAASAPVGSDTNGVNGESVQEGFPVVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLRRQKVERYLEKRKRRRWSK--VSSYQSRQRVANARPRHKGRFLPLESEFVPIAELQRRQRNLVKEMRDKAAALA 342
            MH DETI + +PFWAF GAH  +  S VD+ ++ + +    GG A        XXXXXX                 G  +   G  G+   IADNVDGFLD+F+AL GG D +              I+EEDL +L +MD   FLP           ++       PS  HE++ TVP     +EGG                                                                 XXXXXXXXXXXXXXXXXXXXXXXXXX     Q+RRQKV RYL K++RR WSK   SSYQSRQRVAN+RPRHKGRFLPLESEFVPIAELQRRQR L+ +MR+KAAA A
Sbjct:    1 MHDDETIAMHAPFWAFSGAHRPVEESTVDSSSSGRKANNAGGGIANKYSIEAGXXXXXXXXXXXXXXXXPGKGSSGGRDVVVNGHEGD---IADNVDGFLDEFMALAGGNDEDYGMMLEXXXXXXPAISEEDLVFLADMDLADFLPPATTAEDGGALLS-------PSSVHEME-TVP-----SEGGGVSXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISLKEQVRRQKVARYLAKKQRRCWSKPAASSYQSRQRVANSRPRHKGRFLPLESEFVPIAELQRRQRALMVQMREKAAAAA 330          
BLAST of mRNA_H-canaliculatus_F_contig14005.3187.1 vs. uniprot
Match: D7G0D0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D0_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 6.060e-12
Identity = 80/206 (38.83%), Postives = 100/206 (48.54%), Query Frame = 0
Query:    1 MHSDETI-DVFSPFWAFPGAHGHLGSAVDTHNNDKPSKPDVGGAAVXXXXXXXXXXXXXKEMGAV--------------EHRMENDIMDVGGGLSFGGLAGEVEQIADNVDGFLDDFLALGG----------------GADGEIAEEDLCWLEEMDPTAFLPXXXXXXXXXXXVAAGRDDRL-PSPAHEIKLTVPLVAEVAEGGEA 174
            MH+DETI  +++PFWA  GAH  +   VD+ +    +  + G + V XXXXXXXXXXXX  +G                  R + D MDVG  +S  G       IADNVDGFLD+F+AL G                G    I+EEDL +L +MD   FLP            +AG    L PS AHEI+    L   VA GGEA
Sbjct:    1 MHNDETIISMYAPFWACSGAHRPVEGTVDSSDRKINAGGNNGNSEVGXXXXXXXXXXXXXXLGKXXXXXXXXXXXESGENQRKQLDSMDVGLNVSGEG------DIADNVDGFLDEFIALAGDDDYGDSMMLEEGCEGGGGAAISEEDLAYLADMDLADFLPAGAAEGAPEAGTSAGGGAPLSPSSAHEIET---LPDHVAGGGEA 197          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig14005.3187.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KZS0_9PHAE1.090e-3139.64CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KKD0_9PHAE2.110e-2946.72CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LIC1_ECTSI6.600e-2642.34CCT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G0D0_ECTSI6.060e-1238.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 320..340
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 29..311
IPR010402CCT domainPFAMPF06203CCTcoord: 271..311
e-value: 1.7E-14
score: 53.5
IPR010402CCT domainPROSITEPS51017CCTcoord: 271..313
score: 11.896

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig14005contigH-canaliculatus_F_contig14005:627..1709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig14005.3187.1mRNA_H-canaliculatus_F_contig14005.3187.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig14005 627..1709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig14005.3187.1 ID=prot_H-canaliculatus_F_contig14005.3187.1|Name=mRNA_H-canaliculatus_F_contig14005.3187.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=361bp
MHSDETIDVFSPFWAFPGAHGHLGSAVDTHNNDKPSKPDVGGAAVAEQTS
SSSSSNNNKEMGAVEHRMENDIMDVGGGLSFGGLAGEVEQIADNVDGFLD
DFLALGGGADGEIAEEDLCWLEEMDPTAFLPPPPPLPPSSDDVAAGRDDR
LPSPAHEIKLTVPLVAEVAEGGEARWTPAAPAPVLAAAPVPAGGPAIAAV
GVTPSSAGTPAASAPVGSDTNGVNGESVQEGFPVVGAAAAAAAASGAPFD
SAGGAAAAAAAATVTQKEQLRRQKVERYLEKRKRRRWSKVSSYQSRQRVA
NARPRHKGRFLPLESEFVPIAELQRRQRNLVKEMRDKAAALARTADAGVV
SPDFNQHVAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain