prot_H-canaliculatus_F_contig1390.3103.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1390.3103.1
Unique Nameprot_H-canaliculatus_F_contig1390.3103.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length240
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1390.3103.1 vs. uniprot
Match: A0A6H5JAX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAX9_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 5.210e-9
Identity = 57/134 (42.54%), Postives = 63/134 (47.01%), Query Frame = 0 
Query:  112 RLPTPTEQTPSPRSNMSNAGARG-FAFGLAPPASQNGXXXXXRPRSADGDHDRYYQGFEGSXXXXXXXXXXGERDLYSVGLG------WRRSAERGAGNSGDEAEXXXXXXXXXDPGFREELEVFASSLRREFE 238
            R+PTPTEQTPSPR  M   G  G FAFG+  P S         P   D DH  +     GS          G    Y  G G      WR S + G G S DE E         D GFREEL+VFASSLRR+FE
Sbjct:   41 RVPTPTEQTPSPRKGMPYGGGGGVFAFGVDSPDSSG-------PDKRD-DHGYFEASEGGSKKAGGCGGNLGTG--YEQGQGVSPARRWR-SEDSGGGESDDEVEGGGV-----DAGFREELDVFASSLRRDFE 158
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1390.3103.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JAX9_9PHAE5.210e-942.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1390contigH-canaliculatus_F_contig1390:24630..26475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1390.3103.1mRNA_H-canaliculatus_F_contig1390.3103.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1390 24630..26503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1390.3103.1 ID=prot_H-canaliculatus_F_contig1390.3103.1|Name=mRNA_H-canaliculatus_F_contig1390.3103.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=240bp
MTEEQANDFTRTIPERVASQDCMTPTMVRTGAGDDARRPREELASRGSSR
WANGKATAGAPYHRRSRPSTTESTTLYGGTGGGGDGSVDEPMLPLAESLS
AETPLASVAADRLPTPTEQTPSPRSNMSNAGARGFAFGLAPPASQNGGGG
GGRPRSADGDHDRYYQGFEGSGGGAGSGGSGGERDLYSVGLGWRRSAERG
AGNSGDEAEGEGGGRGGGDPGFREELEVFASSLRREFELR
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