prot_H-canaliculatus_F_contig1378.3011.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1378.3011.1
Unique Name	prot_H-canaliculatus_F_contig1378.3011.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	148

Homology

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1378.3011.1 vs. uniprot
Match: D7FMM7_ECTSI (Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM7_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 1.670e-42
Identity = 108/151 (71.52%), Postives = 118/151 (78.15%), Query Frame = 0

Query:    1 AADVATGVSTVAXXXXXXXXXXAGPFLRQASKQVPGAETLAQTAPNVASLASQALSFIASQVPHAGQ-PPFGGSVSGLSQSASGVTTPASAATSGHAHASEAPPTFPGAPERDPWVET---PGPSAGGKPGKFEEELAREERELFGDKEGK 147
            AADVATG+ST  XXXXXXXXXXAGPF +QASKQVPGAETLAQTAPNVA+LASQALSF+ASQVP AGQ PPF G  SG  QSAS  ++ A+   +GH      PPTFPGAPE+DPW  T      +A GKPGKFEEELAREERELFGD E K
Sbjct:  240 AADVATGLSTXXXXXXXXXXXXAGPFFKQASKQVPGAETLAQTAPNVAALASQALSFVASQVPRAGQGPPFSGGASGPPQSAS-ASSAATQTKTGHDTPPPLPPTFPGAPEQDPWSSTHASAAAAASGKPGKFEEELAREERELFGDDEKK 389

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1378.3011.1 vs. uniprot
Match: A0A6H5JV38_9PHAE (Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV38_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.080e-31
Identity = 96/149 (64.43%), Postives = 102/149 (68.46%), Query Frame = 0

Query:    1 AADVATGVSTVAXXXXXXXXXXAGPFLRQASKQVPGAETLAQTAPNVASLASQALSFIASQVPHAGQ-PPFGGSVSGLSQSASGVTTPASAATSGHAHASEAPPTFPGAPERDPWVET---PGPSAGGKPGKFEEELAREERELFGDKE 145
            AADVATG+ TVAXXXXXXXX  AGPFL+QASKQVPGAE LAQTAPNVA+LASQALSF+ASQVP AGQ PPF G  SG                           TFPGAPE+DPW  T      +A G PGKFEEELAREERELFGD E
Sbjct:  360 AADVATGLGTVAXXXXXXXXSLAGPFLKQASKQVPGAEALAQTAPNVAALASQALSFVASQVPRAGQGPPFSGGASGPPXXXXXXXXXXXXXXXXXXXXXXXX-TFPGAPEQDPWSSTHASTAAAASGTPGKFEEELAREERELFGDGE 507

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1378.3011.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1378.3011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FMM7_ECTSI	1.670e-42	71.52	Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JV38_9PHAE	1.080e-31	64.43	Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..23
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 24..147
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1378	contig	H-canaliculatus_F_contig1378:435..1894 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1378.3011.1	mRNA_H-canaliculatus_F_contig1378.3011.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1378 435..3175 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1378.3011.1 ID=prot_H-canaliculatus_F_contig1378.3011.1|Name=mRNA_H-canaliculatus_F_contig1378.3011.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=148bp
AADVATGVSTVATSLSSAAVSLAGPFLRQASKQVPGAETLAQTAPNVASL
ASQALSFIASQVPHAGQPPFGGSVSGLSQSASGVTTPASAATSGHAHASE
APPTFPGAPERDPWVETPGPSAGGKPGKFEEELAREERELFGDKEGK*