prot_H-canaliculatus_F_contig1369.2958.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1369.2958.1
Unique Name	prot_H-canaliculatus_F_contig1369.2958.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	93

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.080e-45
Identity = 84/93 (90.32%), Postives = 86/93 (92.47%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKKVWRC 93
            MECIKLITS NYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVD+HS NMFV GLSLTTVGNL+TPDIARDLMMEVEKHLRG RPYLVKK   C
Sbjct:   66 MECIKLITSPNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDMHSSNMFVAGLSLTTVGNLATPDIARDLMMEVEKHLRGGRPYLVKKAALC 158

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A836CEJ3_9STRA (AP-1 complex subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ3_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.090e-35
Identity = 69/93 (74.19%), Postives = 81/93 (87.10%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKKVWRC 93
            MECIKLITS  + DKRIGYLGL LLLT++EEVLMLVTNSLKVDL+S+N FVVGL+LTTVGNL+TPDIARDLMM+V+++L+   PYL KK   C
Sbjct:   66 MECIKLITSPEFTDKRIGYLGLMLLLTEKEEVLMLVTNSLKVDLNSQNPFVVGLALTTVGNLATPDIARDLMMDVDRYLQSNNPYLRKKAALC 158

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A485KG16_9STRA (AP-1 complex subunit gamma n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG16_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.170e-30
Identity = 61/89 (68.54%), Postives = 75/89 (84.27%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI +SN+ +KRIGYLGL LLLTDQEEVLMLVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    YL KK
Sbjct:   66 MECLKLIAASNFSEKRIGYLGLMLLLTDQEEVLMLVTNSLKNDLNHSNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSENNYLRKK 154

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A6G0WMQ6_9STRA (AP-1 complex subunit gamma n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMQ6_9STRA)

HSP 1 Score: 120 bits (302), Expect = 7.570e-30
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI +SN+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    YL KK
Sbjct:   66 MECLKLIAASNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHSNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSENNYLRKK 154

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A425C4M0_9STRA (Adaptin_N domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425C4M0_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.630e-30
Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    +L KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKK 154

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A397DE85_9STRA (Adaptin_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DE85_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.130e-29
Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    +L KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKK 154

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: K8YRB5_NANGC (AP-1 complex subunit gamma-1 (Fragment) n=3 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRB5_NANGC)

HSP 1 Score: 118 bits (295), Expect = 5.880e-29
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI S ++ +KRIGYLGL+LLLT+QEEVL LVTNS+K DL+S N FVVGL+L+ VGNL+T DIARDL M+V+KHL+    YL KK
Sbjct:   72 MECLKLIASPHFFEKRIGYLGLSLLLTEQEEVLTLVTNSIKNDLNSPNPFVVGLALSAVGNLATEDIARDLAMDVDKHLKSNNSYLRKK 160

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BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: W7TQP3_9STRA (AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQP3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 6.690e-29
Identity = 60/89 (67.42%), Postives = 74/89 (83.15%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI S ++ +KRIGYLGL+LLLT+QEEVL LVTNS+K DL+S N FVVGL+L+ VGNL+T DIARDL M+V+KHL+    YL KK
Sbjct:   66 MECLKLIASPHFFEKRIGYLGLSLLLTEQEEVLTLVTNSIKNDLNSPNPFVVGLALSAVGNLATEDIARDLAMDVDKHLKSNNSYLRKK 154

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A397F0B5_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F0B5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 9.090e-29
Identity = 58/89 (65.17%), Postives = 74/89 (83.15%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLLTDQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    +L KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLTDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSDNHFLRKK 154

[Close]

BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Match: A0A1V9YXT6_9STRA (AP-1 complex subunit gamma n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YXT6_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.240e-28
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = 0

Query:    1 MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMFVVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKK 89
            MEC+KLI ++N+ +KRIGYLGL LLL DQEEVL LVTNSLK DL+  N FVVGLSLT VGN+++PD+ARDL+ +++KHL+    YL KK
Sbjct:   66 MECLKLIAANNFSEKRIGYLGLMLLLNDQEEVLTLVTNSLKNDLNHVNPFVVGLSLTAVGNIASPDMARDLITDIDKHLKSENDYLRKK 154

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1369.2958.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FHP4_ECTSI	1.080e-45	90.32	AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI...	[more]
A0A836CEJ3_9STRA	4.090e-35	74.19	AP-1 complex subunit gamma n=1 Tax=Tribonema minus...	[more]
A0A485KG16_9STRA	1.170e-30	68.54	AP-1 complex subunit gamma n=1 Tax=Aphanomyces ste...	[more]
A0A6G0WMQ6_9STRA	7.570e-30	67.42	AP-1 complex subunit gamma n=1 Tax=Aphanomyces eut...	[more]
A0A425C4M0_9STRA	7.630e-30	65.17	Adaptin_N domain-containing protein n=1 Tax=Aphano...	[more]
A0A397DE85_9STRA	1.130e-29	65.17	Adaptin_N domain-containing protein n=2 Tax=Aphano...	[more]
K8YRB5_NANGC	5.880e-29	67.42	AP-1 complex subunit gamma-1 (Fragment) n=3 Tax=Na...	[more]
W7TQP3_9STRA	6.690e-29	67.42	AP-1 complex subunit gamma n=3 Tax=Monodopsidaceae...	[more]
A0A397F0B5_9STRA	9.090e-29	65.17	Adaptin_N domain-containing protein (Fragment) n=1...	[more]
A0A1V9YXT6_9STRA	1.240e-28	65.17	AP-1 complex subunit gamma n=3 Tax=Saprolegniaceae...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 1..90 e-value: 6.0E-25 score: 87.8
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..93 e-value: 1.8E-32 score: 114.4
None	No IPR available	PANTHER	PTHR22780:SF5	ADAPTOR PROTEIN COMPLEX 1, GAMMA SUBUNIT, ISOFORM D	coord: 1..93
None	No IPR available	PANTHER	PTHR22780	ADAPTIN, ALPHA/GAMMA/EPSILON	coord: 1..93
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1369	contig	H-canaliculatus_F_contig1369:695..1560 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1369.2958.1	mRNA_H-canaliculatus_F_contig1369.2958.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1369 695..1584 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1369.2958.1 ID=prot_H-canaliculatus_F_contig1369.2958.1|Name=mRNA_H-canaliculatus_F_contig1369.2958.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=93bp
MECIKLITSSNYMDKRIGYLGLTLLLTDQEEVLMLVTNSLKVDLHSENMF
VVGLSLTTVGNLSTPDIARDLMMEVEKHLRGARPYLVKKVWRC

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR002553	Clathrin/coatomer_adapt-like_N