prot_H-canaliculatus_F_contig1345.2803.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-canaliculatus_F_contig1345.2803.1
Unique Name	prot_H-canaliculatus_F_contig1345.2803.1
Type	polypeptide
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length	520

Homology

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: D7G6S0_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6S0_ECTSI)

HSP 1 Score: 596 bits (1536), Expect = 9.820e-209
Identity = 355/454 (78.19%), Postives = 372/454 (81.94%), Query Frame = 0

Query:   64 PSPVVAGSWGDRAGYVDDGYMRQDPNILPGGGTPLASTTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVP-SLYPYQQPAGTFPGAYGGGGXXXXXXXXXXXXXXXXXGNFY-GQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERFVTAPSPRMMGPGVGAARMQQTPHFRQPLLPAHNPALRHHQALQPGDDKLPPPSPAADTGSGVAPGFTVSGPGGEEDHH-------QGEASTTEVGIDPGSRPST--GGDKYGARSNDHPHLAYIYRGRGGTGTDESGGYPSSAGGGGDGKAAGDDKPQDQDSGYRGRDESAYLAAPASSVGGSGASPGDPKGVSRARSSSPSAAANAVTSALPHQSLEHAMQTKLSI 506
            PSPVVAGSWG+R GYV++GYMRQDPNI+ G GTP+ASTTS NGEG FMVSTGGANAMGAP+QSFYPPSLYGVP S+YPYQQP G F        XXXXXXXXXXXXXXX  GNFY GQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERER+VTAPSPRMMGPGV A RMQQT HFRQPLLP HN  LRHHQ                     VAPGFT                  QG+AS TEVGID G R ++  GGDKYGARSNDHPHLAYIYRGRG    DE+GGYPS AGGG DGKAAGD+KPQDQDSGY GRD+SAY+AAPASSVGGS ASP DPKGVSRARSSSPSAAANA   ALPHQSLEHAMQTKL++
Sbjct:   21 PSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPMQSFYPPSLYGVPTSVYPYQQP-GAFXXXXXXX-XXXXXXXXXXXXXXXAGGNFYAGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTTHFRQPLLPGHNAGLRHHQGXXXXXXXXX--XXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXQGDASATEVGIDSGPRGASTGGGDKYGARSNDHPHLAYIYRGRGTA--DETGGYPS-AGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAPASSVGGSAASP-DPKGVSRARSSSPSAAANA---ALPHQSLEHAMQTKLTM 463

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: A0A6H5L5J0_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J0_9PHAE)

HSP 1 Score: 446 bits (1146), Expect = 9.620e-152
Identity = 257/336 (76.49%), Postives = 267/336 (79.46%), Query Frame = 0

Query:  194 TTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERFVTAPSPRMMGPGVGAARMQQTPHFRQPLLPAHNPALRHHQALQPGDDKLPPPSPAADTGSGVAPGFTVSGPGGEEDHH--------QGEASTTEVGIDPGSRPST--GGDKYGARSNDHPHLAYIYRGRGGTGTDESGGYPSSAGGGGDGKAAGDDKPQDQDSGYRGRDESAYLAAPASSVGGSGASPGDPKGVSRARSSSPSAAANAVTSALPHQSLEHAMQTKLSIGGNGSPPSAAQPS 519
            T   L GPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERER+VTAPSPRMMGPGV A RMQQT HFRQPLLPAHN  LRHHQ                     VAPGFT                   QG+AS T+VGID G R ++  GGDKYGA SNDHPHLAYIYRGRG T  DE+GGYPS AGGG DGKAAGD+KPQDQDSGY GRD+SAY+AAP SSVGGS ASP DPKGVSRARSSSP AAANA   ALPHQSLEHAMQTKL+IGGNGSPPSAAQPS
Sbjct:    6 TGDGLAGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERYVTAPSPRMMGPGVAAGRMQQTAHFRQPLLPAHNAGLRHHQGXXXXXXXXX--XXXXXXXXXVAPGFTXXXXXXXXXXXXXXXXXXXQGDASATDVGIDAGPRGASTGGGDKYGAHSNDHPHLAYIYRGRG-TAADETGGYPS-AGGGVDGKAAGDEKPQDQDSGYHGRDDSAYMAAPTSSVGGSAASP-DPKGVSRARSSSPGAAANA---ALPHQSLEHAMQTKLTIGGNGSPPSAAQPS 333

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: A0A7S2V9D2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9D2_9STRA)

HSP 1 Score: 148 bits (373), Expect = 6.430e-39
Identity = 73/96 (76.04%), Postives = 81/96 (84.38%), Query Frame = 0

Query:  188 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 283
            PG PIQTT   QGP+GCNLFVFHIPN+MTN  L+ LF +FGNV+SARIMVEK TGRSRGFGF+SYDN  SA+ AI  MNG+QI HKRLKVQHKKDK
Sbjct:   41 PGAPIQTTPLGQGPEGCNLFVFHIPNSMTNVDLYHLFLRFGNVVSARIMVEKHTGRSRGFGFISYDNAVSAKDAIKGMNGFQIGHKRLKVQHKKDK 136

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: A0A6H5L539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L539_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 2.300e-38
Identity = 70/82 (85.37%), Postives = 76/82 (92.68%), Query Frame = 0

Query:   64 PSPVVAGSWGDRAGYVDDGYMRQDPNILPGGGTPLASTTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVP-SLYPYQQP 144
            PSPVVAGSWG+R GYV++GYMRQDPNI+ G GTP+ASTTS NGEG FMVSTGGANAMGAPLQSFYPPSLYGVP S+YPYQQP
Sbjct:   19 PSPVVAGSWGERTGYVEEGYMRQDPNIVAGAGTPIASTTSGNGEGTFMVSTGGANAMGAPLQSFYPPSLYGVPPSVYPYQQP 100

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: D0NCQ3_PHYIT (CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phytophthora TaxID=4783 RepID=D0NCQ3_PHYIT)

HSP 1 Score: 150 bits (378), Expect = 3.930e-38
Identity = 94/180 (52.22%), Postives = 102/180 (56.67%), Query Frame = 0

Query:  108 GGFMV---STGGANAMGAPLQSFYPPSLYGVPSLYPYQQPAGTFPGAYGGGGXXXXXXXXXXXXXXXXXGNFYGQGGYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 283
            GGF       GG  A GA     YP          PY QP   +P  YGG G                        GY  +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SAE AI  MNG+Q+  KRLKVQHKK+K
Sbjct:   74 GGFQQPQPQLGGQGAQGAAAYGAYP---------QPYGQPM-QYPPPYGGSGYMYPFPQAY---------------GYPPQIVGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSAEAAIKGMNGFQVGRKRLKVQHKKEK 228

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: M4B497_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B497_HYAAE)

HSP 1 Score: 149 bits (375), Expect = 1.300e-37
Identity = 91/200 (45.50%), Postives = 105/200 (52.50%), Query Frame = 0

Query:   84 MRQDPNILPGGGTPLASTTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVPSLYPYQQPAGTFPGAYGGGGXXXXXXXXXXXXXXXXXGNFYGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 283
            ++Q      G   P     S   +G      G +   G P+Q  YPP   G   +YP+ Q  G  P   G                                  PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI  MNG+Q+  KRLKVQHKK+K
Sbjct:   71 LQQQQPTAAGFPQPQQQLDSQGSQGAAAAYGGYSQPYGQPMQ--YPPPYGGSSYMYPFPQAYGYPPQIVG----------------------------------PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEK 234

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: A0A8K1CK88_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CK88_PYTOL)

HSP 1 Score: 147 bits (372), Expect = 1.990e-37
Identity = 75/104 (72.12%), Postives = 84/104 (80.77%), Query Frame = 0

Query:  181 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 283
            GYA +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ +GNVISARIMVEK TGRSRGFGFVSYDN  SAE+AI  MNG+Q+  KRLKVQHKK+K
Sbjct:  113 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFAPYGNVISARIMVEKETGRSRGFGFVSYDNAASAEQAIKAMNGFQVGRKRLKVQHKKEK 216

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: K3WGX7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGX7_GLOUD)

HSP 1 Score: 147 bits (371), Expect = 2.770e-37
Identity = 75/104 (72.12%), Postives = 84/104 (80.77%), Query Frame = 0

Query:  181 GYA-RSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 283
            GYA +   PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI+ MNG+Q+  KRLKVQHKK+K
Sbjct:  121 GYAPQVAGPGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIAGMNGFQVGRKRLKVQHKKEK 224

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: A0A0P1AAZ2_PLAHL (Cug-bp-and etr-3-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAZ2_PLAHL)

HSP 1 Score: 147 bits (370), Expect = 5.170e-37
Identity = 94/205 (45.85%), Postives = 109/205 (53.17%), Query Frame = 0

Query:   79 VDDGYMRQDPNILPGGGTPLASTTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVPSLYPYQQPAGTFPGAYGGGGXXXXXXXXXXXXXXXXXGNFYGQGGYARSTNPGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 283
            V  G+ +  P +  GG  P AS T+    GG+        A G P+Q  Y P   G   +YP+       P   G                                  PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F+ FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI  MNG+Q+  KRLKVQHKK+K
Sbjct:   71 VTGGFQQPQPQL--GGQVPQASATAY---GGYP------QAYGQPMQ--YAPPYGGSGYMYPFXXXXXXXPQIVG----------------------------------PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFATFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGFQVGRKRLKVQHKKEK 228

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BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Match: A0A024URK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024URK9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.660e-37
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 0

Query:  188 PGQPIQTTTNLQGPDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFVSYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDK 283
            PG PIQTT + QGP GCNLFVFHIPN MTN+ LF  F  FGNVISARIMVEK TGRSRGFGFVSYDN  SA+ AI  MNGYQ+  KRLKVQHKK+K
Sbjct:  159 PGPPIQTTESGQGPPGCNLFVFHIPNDMTNQDLFNYFQSFGNVISARIMVEKETGRSRGFGFVSYDNAPSADAAIKGMNGYQVGRKRLKVQHKKEK 254

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig1345.2803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6S0_ECTSI	9.820e-209	78.19	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5L5J0_9PHAE	9.620e-152	76.49	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A7S2V9D2_9STRA	6.430e-39	76.04	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A6H5L539_9PHAE	2.300e-38	85.37	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D0NCQ3_PHYIT	3.930e-38	52.22	CUG-BP-and ETR-3-like factor, putative n=5 Tax=Phy...	[more]
M4B497_HYAAE	1.300e-37	45.50	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]
A0A8K1CK88_PYTOL	1.990e-37	72.12	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
K3WGX7_GLOUD	2.770e-37	72.12	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A0P1AAZ2_PLAHL	5.170e-37	45.85	Cug-bp-and etr-3-like n=1 Tax=Plasmopara halstedii...	[more]
A0A024URK9_9STRA	5.660e-37	76.04	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 205..278 e-value: 5.1E-28 score: 109.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 206..276 e-value: 4.6E-22 score: 77.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 204..282 score: 19.382
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 185..288 e-value: 2.6E-29 score: 103.5
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 172..286
None	No IPR available	PANTHER	PTHR24012:SF686	CUGBP ELAV-LIKE FAMILY MEMBER 1	coord: 172..286
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 196..301

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-canaliculatus_F_contig1345	contig	H-canaliculatus_F_contig1345:11351..20573 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90	2022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig1345.2803.1	mRNA_H-canaliculatus_F_contig1345.2803.1	Hapterophycus canaliculatus Oshoro5f female	mRNA	H-canaliculatus_F_contig1345 10934..22594 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-canaliculatus_F_contig1345.2803.1 ID=prot_H-canaliculatus_F_contig1345.2803.1|Name=mRNA_H-canaliculatus_F_contig1345.2803.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=520bp
MSYQQQHQGAPDSSRRQQQATPYPLLGTSGAAAAGRAPAAAVYGMPQQYG
QQQQQADGYGGPPPSPVVAGSWGDRAGYVDDGYMRQDPNILPGGGTPLAS
TTSANGEGGFMVSTGGANAMGAPLQSFYPPSLYGVPSLYPYQQPAGTFPG
AYGGGGGAGGGAGAAGGAGSTAGGNFYGQGGYARSTNPGQPIQTTTNLQG
PDGCNLFVFHIPNTMTNEALFRLFSKFGNVISARIMVEKATGRSRGFGFV
SYDNRDSAEKAISQMNGYQIEHKRLKVQHKKDKERERFVTAPSPRMMGPG
VGAARMQQTPHFRQPLLPAHNPALRHHQALQPGDDKLPPPSPAADTGSGV
APGFTVSGPGGEEDHHQGEASTTEVGIDPGSRPSTGGDKYGARSNDHPHL
AYIYRGRGGTGTDESGGYPSSAGGGGDGKAAGDDKPQDQDSGYRGRDESA
YLAAPASSVGGSGASPGDPKGVSRARSSSPSAAANAVTSALPHQSLEHAM
QTKLSIGGNGSPPSAAQPS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035979	RBD_domain_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR000504	RRM_dom