prot_H-canaliculatus_F_contig13313.2707.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13313.2707.1
Unique Nameprot_H-canaliculatus_F_contig13313.2707.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length362
Homology
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: D8LSC4_ECTSI (U2 small nuclear ribonucleoprotein A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC4_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.280e-122
Identity = 192/206 (93.20%), Postives = 204/206 (99.03%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG 206
            MIENLGVTQDQFDA+DFSDNEIKKLDNFPRYKRLSSL+LCNNHV+KISEDLGTALPNL+CLILTNNKLSTLAELKGLGTC+KL MLSLLHNEV+NKQYYRLYMINL+P+LKQLDFQKVTVKERE+A RLA+SQAGQAM+QDVAQQAEKAKTFTPGAPAA+EQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG
Sbjct:   32 MIENLGVTQDQFDAMDFSDNEIKKLDNFPRYKRLSSLLLCNNHVSKISEDLGTALPNLSCLILTNNKLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLIPSLKQLDFQKVTVKERESAVRLARSQAGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG 237          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A6H5L3Q9_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q9_9PHAE)

HSP 1 Score: 220 bits (560), Expect = 1.130e-65
Identity = 121/140 (86.43%), Postives = 127/140 (90.71%), Query Frame = 0
Query:   67 KLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG 206
            +LSTLAELKGLGTC+KL MLSLLHNEV+NKQYYRLYMINLVP+LKQLDFQKVTVK            AGQAM+QDVAQQAEKAKTFTPGAPAA+EQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG
Sbjct:    2 QLSTLAELKGLGTCTKLTMLSLLHNEVVNKQYYRLYMINLVPSLKQLDFQKVTVK------------AGQAMIQDVAQQAEKAKTFTPGAPAAEEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG 129          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A835ZE59_9STRA (Leucine-rich repeat-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE59_9STRA)

HSP 1 Score: 194 bits (493), Expect = 5.180e-54
Identity = 109/199 (54.77%), Postives = 140/199 (70.35%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPS 199
            +IEN+GVTQDQFD IDFSDNEI+KLDNFPR  RL++L+L NN +A+I +D+G  LPNL+CL+LTNN +S L+EL  LG C +L MLSLL N V   Q+YRLY+I+ +P+LK LDF KV  +ER  A RL +S AG+AM +D+A QA   KTF PG  A     LT   R      I +A T EEI+ L + ++AGI P+
Sbjct:   32 IIENIGVTQDQFDTIDFSDNEIQKLDNFPRMTRLTTLLLSNNVIARIGQDIGKKLPNLSCLVLTNNHISVLSELDPLGYCQQLTMLSLLENPVTRAQHYRLYVIHKIPSLKALDFCKVKKEERARAERLFQSAAGRAMEEDIALQA---KTFVPGGAA--RAPLTPAQRTQVIAMIQRAMTTEEIDRLERMLEAGIYPA 225          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A0U2IG20_ACAPC (U2 small nuclear ribonucleoprotein A n=1 Tax=Acartia pacifica TaxID=335913 RepID=A0A0U2IG20_ACAPC)

HSP 1 Score: 177 bits (450), Expect = 3.620e-50
Identity = 105/214 (49.07%), Postives = 143/214 (66.82%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAP--------AADEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQGG 206
            +IENLG T DQFD ID SDNE++KLD FP+  RL +L+L NN + +++E L   LPNL  L++TNN L  LA+L+ L T  KLEM+SLLHN V+ K+ YRLY+I+  P+LK LDF+K+ +KEREAA  L K++ G+  ++D+  QA KAKTF PGAP        AA+   LT E        IAKA ++EEIE L++ ++ G +P    + GG
Sbjct:   33 VIENLGSTLDQFDCIDLSDNEVRKLDGFPQLNRLKTLLLNNNRIVRVAEGLELNLPNLNTLVMTNNSLQELADLEPLTTMKKLEMMSLLHNPVVTKRNYRLYVIHKFPSLKVLDFKKIKMKEREAAKALFKTKEGKTQLKDI--QA-KAKTFVPGAPLPEATNNKAANPAGLTPEQVKNIKTMIAKAKSLEEIERLNQMLRTGKMPGEASENGG 243          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A3Q1GBX3_9TELE (U2 small nuclear ribonucleoprotein A'-like n=2 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=A0A3Q1GBX3_9TELE)

HSP 1 Score: 174 bits (441), Expect = 2.280e-49
Identity = 96/208 (46.15%), Postives = 139/208 (66.83%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRA---IYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 205
            ++ENLG T DQFD +DFSDNEI+KLD FP  +RL +L++ NN + +I E+L  +LP+LT L+LTNN +  L +L  L T   L +LSLL N V NK++YRLY+IN +P ++ LDFQKV +KER+ A ++ K + G  + +D+A+   + KTFTPG  A  E+K T   +A      + IA A+++ E+E L   +QAG IP  + +QG
Sbjct:   10 VLENLGATLDQFDTVDFSDNEIRKLDGFPLLRRLKTLLMNNNRICRIGENLEQSLPSLTELVLTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAR---RTKTFTPGVAAQPEKKRTGPSQADVDAIKNAIANASSLAEVERLKGMLQAGQIPGRDLRQG 214          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A3Q3N132_9LABR (Small nuclear ribonucleoprotein polypeptide A' n=2 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3N132_9LABR)

HSP 1 Score: 175 bits (443), Expect = 2.280e-49
Identity = 98/208 (47.12%), Postives = 138/208 (66.35%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRA---IYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 205
            ++ENLG T DQFD +DFSDNEI+KLD FP  KRL +L++ NN + ++ E+L  +LP LT LILTNN +  L +L  L T   L +LSLL N V NK++YRLYMIN +P ++ LDFQKV  KER+ A ++ K + G  + +D+A+   + KTFTPG PA  E+K T   +A      + IA A+++ E+E L   +QAG IP  + ++G
Sbjct:   33 VLENLGATLDQFDTVDFSDNEIRKLDGFPLLKRLKTLLMNNNRICRVGENLEQSLPCLTELILTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYMINKIPQIRVLDFQKVKQKERQEAEKMFKGKRGAQLAKDIAK---RTKTFTPGVPAQLEKKKTGPSQADVEAIKNAIANASSLAEVERLKGMLQAGQIPGRDLREG 237          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A3Q1EK11_9TELE (Small nuclear ribonucleoprotein polypeptide A' n=6 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A3Q1EK11_9TELE)

HSP 1 Score: 174 bits (441), Expect = 4.530e-49
Identity = 96/208 (46.15%), Postives = 139/208 (66.83%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRA---IYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 205
            ++ENLG T DQFD +DFSDNEI+KLD FP  +RL +L++ NN + +I E+L  +LP+LT L+LTNN +  L +L  L T   L +LSLL N V NK++YRLY+IN +P ++ LDFQKV +KER+ A ++ K + G  + +D+A+   + KTFTPG  A  E+K T   +A      + IA A+++ E+E L   +QAG IP  + +QG
Sbjct:   33 VLENLGATLDQFDTVDFSDNEIRKLDGFPLLRRLKTLLMNNNRICRIGENLEQSLPSLTELVLTNNNIQELGDLDPLATVKTLTLLSLLRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAR---RTKTFTPGVAAQPEKKRTGPSQADVDAIKNAIANASSLAEVERLKGMLQAGQIPGRDLRQG 237          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A0K2V8V0_LEPSM (Small nuclear ribonucleoprotein polypeptide A' [Latimeria chalumnae] n=2 Tax=Lepeophtheirus salmonis TaxID=72036 RepID=A0A0K2V8V0_LEPSM)

HSP 1 Score: 174 bits (441), Expect = 7.030e-49
Identity = 99/205 (48.29%), Postives = 139/205 (67.80%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRAIYADRI-------AKATTVEEIEMLSKKIQAGIIP 198
            +IENLG T DQFD IDFSDNEI++LDNFP   RL +L   NN + +I +++  +LPNL  LILTNN L  LA+L+ L     L  LSL+ N V++K  YRLY+I+ +P L+ LDF+KV +KERE A    KS+ G+ +++++ ++A  AKTFTPGAP ADE K  ++   +  D+I       A+ATT+EEIE L++ ++ G IP
Sbjct:   33 VIENLGATLDQFDCIDFSDNEIRQLDNFPFLPRLKTLFFNNNRIIRIGDNINESLPNLNSLILTNNSLQELADLERLAKIKSLTNLSLMSNPVISKPDYRLYLIHKLPNLRMLDFRKVKLKEREEAKAKFKSEEGKKVLKEIKKRA--AKTFTPGAPLADESKKENQPHGLNPDQIRNIKAAIARATTLEEIERLNQMLRTGQIP 235          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A672F325_SALFA (LRRcap domain-containing protein n=4 Tax=Percomorphaceae TaxID=1489872 RepID=A0A672F325_SALFA)

HSP 1 Score: 174 bits (441), Expect = 1.690e-48
Identity = 96/207 (46.38%), Postives = 137/207 (66.18%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTDEHRAIYA--DRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 205
            ++ENLG T DQFD IDFSDNEI+KLD FP  KRL +L++ NN + +I ++L   LP+LT L+LTNN +  L +L  L +   L +LSLL N V NK++YRLY+IN +P ++ LDFQKV +KER+ A ++ K + G  + +D+A+   + KTFTPG PA  E+K       + A  + IA A+++ E+E L   +QAG IP    +QG
Sbjct:   33 VLENLGATLDQFDTIDFSDNEIRKLDGFPLLKRLKTLLMNNNRICRIGDNLEQCLPSLTELVLTNNNIQELGDLDPLASVKTLTLLSLLRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAR---RTKTFTPGVPAQPEKKTGPSQADVEAIKNAIANASSLAEVERLKGMLQAGQIPGRELRQG 236          
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Match: A0A093PU56_9PASS (U2 small nuclear ribonucleoprotein A (Fragment) n=4 Tax=Passeriformes TaxID=9126 RepID=A0A093PU56_9PASS)

HSP 1 Score: 171 bits (434), Expect = 3.600e-48
Identity = 103/209 (49.28%), Postives = 138/209 (66.03%), Query Frame = 0
Query:    1 MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISEDLGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYRLYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAKTFTPGAPAADEQKLTD----EHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSANYKQG 205
            +IENLG T DQFDAIDFSDNEI+KLD FP  +RL +L++ NN + +I E+L  ALP+LT LILTNN ++ L EL  L T   L  LS+L N V NK++YRLY+I+ VP ++ LDFQKV +KER+ A ++ K + G  + +D+A+   +AKTF PGA    ++K       +  AI A  IA ATT+ E+E L   +QAG IP    K G
Sbjct:    6 VIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLMNNNRICRIGENLEQALPSLTELILTNNNIAELGELDPLATIKSLTYLSVLRNPVTNKKHYRLYLIHKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAR---RAKTFNPGAGLPTDKKKAGPSPGDVEAIKA-AIANATTLAEVERLKGLLQAGQIPGRERKSG 210          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13313.2707.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSC4_ECTSI1.280e-12293.20U2 small nuclear ribonucleoprotein A n=1 Tax=Ectoc... [more]
A0A6H5L3Q9_9PHAE1.130e-6586.43SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZE59_9STRA5.180e-5454.77Leucine-rich repeat-domain-containing protein n=1 ... [more]
A0A0U2IG20_ACAPC3.620e-5049.07U2 small nuclear ribonucleoprotein A n=1 Tax=Acart... [more]
A0A3Q1GBX3_9TELE2.280e-4946.15U2 small nuclear ribonucleoprotein A'-like n=2 Tax... [more]
A0A3Q3N132_9LABR2.280e-4947.12Small nuclear ribonucleoprotein polypeptide A' n=2... [more]
A0A3Q1EK11_9TELE4.530e-4946.15Small nuclear ribonucleoprotein polypeptide A' n=6... [more]
A0A0K2V8V0_LEPSM7.030e-4948.29Small nuclear ribonucleoprotein polypeptide A' [La... [more]
A0A672F325_SALFA1.690e-4846.38LRRcap domain-containing protein n=4 Tax=Percomorp... [more]
A0A093PU56_9PASS3.600e-4849.28U2 small nuclear ribonucleoprotein A (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14580LRR_9coord: 1..143
e-value: 2.4E-50
score: 170.4
NoneNo IPR availablePANTHERPTHR10552U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Acoord: 2..200
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..121
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..144
e-value: 8.4E-32
score: 111.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 33..54
score: 5.371
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 57..78
score: 7.897
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 11..32
score: 5.54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13313contigH-canaliculatus_F_contig13313:211..3063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13313.2707.1mRNA_H-canaliculatus_F_contig13313.2707.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13313 142..3193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13313.2707.1 ID=prot_H-canaliculatus_F_contig13313.2707.1|Name=mRNA_H-canaliculatus_F_contig13313.2707.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=362bp
MIENLGVTQDQFDAIDFSDNEIKKLDNFPRYKRLSSLMLCNNHVAKISED
LGTALPNLTCLILTNNKLSTLAELKGLGTCSKLEMLSLLHNEVLNKQYYR
LYMINLVPTLKQLDFQKVTVKEREAAGRLAKSQAGQAMMQDVAQQAEKAK
TFTPGAPAADEQKLTDEHRAIYADRIAKATTVEEIEMLSKKIQAGIIPSA
NYKQGGGGGEGGGVANGAVAAPAAAAAAASPAKAGTPAPVEGTPASSQEA
PSSKPAPAPAAAAAGDDAASAAAAAPTAPAAAETTPPAAAAAASVPVAAA
SSSMDVDDDAEGTTAAAAAGDHGPGSGDGKQAASPTPASGEGEEEGKEEA
ASSAKGGGGWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf