prot_H-canaliculatus_F_contig1324.2660.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1324.2660.1
Unique Nameprot_H-canaliculatus_F_contig1324.2660.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length381
Homology
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1324.2660.1 vs. uniprot
Match: A0A6H5L7M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7M4_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 2.870e-45
Identity = 112/269 (41.64%), Postives = 146/269 (54.28%), Query Frame = 0 
Query:  115 FGDCIEMAANRAEGTEAAQDTADFLQTMLDTDCKICTCLPQYLIRMPSCDPWTRYHAVAMLLEDVCEHI--GTATSMEFLGPADASVVKAVEGEEAVSAVVEEEEGQKESQDETPEAQVELPGQEDLEVKAAEQEKRASGGVVGEEEVVEPHLPNTFGPCQQEGHVHTDPNDPTSCQPATTQEEGFGSP-QDRTDDRXXXXXXXXXGLVGLGMSVIGVVAIGXXXXXXXVWAWGKFQSGTRQPGVRYMATDIADHDLGTELGPFGRQYA 380
            F +C++ A   AE  EA+Q T  FL+ ML  +  IC CLP +LI+MPSC PW RYH V  ++++VC+ I  G  T +  +  A+  V                   +++SQD    A +     + LE              +       P LPNTFGPC     VH  P+DP +CQP+   EE  G    D  D R         G++ LG+SVIGVVA+G  XX   +WAWGKFQSGTRQPGVRYMAT + D+++GTELGPFGRQYA
Sbjct:  173 FQECVKEA--EAEDEEASQATVQFLEKMLAEESTICACLPPFLIKMPSCGPWIRYHDVGEIVQNVCDFIDDGNNTVVADMDIAEVDVTPE----------------ERDSQDNATVAVLPAEDTKKLEXXXXXXXXXXXEAGIXXXXXRRPRLPNTFGPCPPGQEVH--PSDPKACQPSLNSEEYQGEEFGDGRDSRREGG-----GMISLGLSVIGVVAVGGVXXVGGLWAWGKFQSGTRQPGVRYMATGL-DNNIGTELGPFGRQYA 415
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1324.2660.1 vs. uniprot
Match: D8LR88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR88_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.060e-35
Identity = 108/277 (38.99%), Postives = 144/277 (51.99%), Query Frame = 0 
Query:  105 QEIRNQMDEIFGDCIEMAANRAEGTEAAQDTADFLQTMLDTDCKICTCLPQYLIRMPSCDPWTRYHAVAMLLEDVCEHIGTATSMEFLGPADASVVKAVEGEEAVSAVVEEEEGQKESQDETPEAQVELPGQEDLEVKAAEQEKRASGGVVGEEEVVEPHLPNTFGPCQQEGHVHTDPNDPTSCQPATTQEEGFGSP-QDRTDDRXXXXXXXXXGLVGLGMSVIGVVAIGXXXXXXXVWAWGKFQSGTRQPGVRYMATDIADHDLGTELGPFGRQYA 380
            QE   ++   F +C++ A   A   EA+Q T  FL+ +L  +  IC CL  +LI+MP+C PW RYH V  ++++V            +   D +  +    ++A+ AV+  E  +K            L                       E      HLPN FGPC      H  P+DP +CQP+   EE  G    D  D R         G++ LG+SV+GVVA+GXXXXXXX WAWGKFQSGTRQPGVRYMAT + D+++GTELGPFGRQYA
Sbjct:  163 QETAEKLATAFQECVKEA--EAGDEEASQATVQFLEKLLAEESTICACLSPFLIKMPTCGPWIRYHDVGKIVQNV-----------LVAEVDLTPEEKDSQDDAIVAVLPAENTKK------------LXXXXXXXXXXXXXXXXXXXXXXXEHPA---HLPNAFGPCPPGQEAH--PSDPKACQPSMNSEEYQGEEFGDGRDGRREGG-----GMISLGLSVMGVVAVGXXXXXXXXWAWGKFQSGTRQPGVRYMATGL-DNNIGTELGPFGRQYA 403
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1324.2660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L7M4_9PHAE2.870e-4541.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LR88_ECTSI1.060e-3538.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..344
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 345..380
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..318
NoneNo IPR availableTMHMMTMhelixcoord: 322..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1324contigH-canaliculatus_F_contig1324:17540..21587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1324.2660.1mRNA_H-canaliculatus_F_contig1324.2660.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1324 13944..23300 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1324.2660.1 ID=prot_H-canaliculatus_F_contig1324.2660.1|Name=mRNA_H-canaliculatus_F_contig1324.2660.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=381bp
MTTGQIIKHGSATPRSLIAAHSHVPSARSCELTQRVKSQSKVPQPTAPRL
VAHIKHNRTTGTAPQLPPRNMHTTSSPHYRKPPNTMPRPPQGKITPGEKT
DEELQEIRNQMDEIFGDCIEMAANRAEGTEAAQDTADFLQTMLDTDCKIC
TCLPQYLIRMPSCDPWTRYHAVAMLLEDVCEHIGTATSMEFLGPADASVV
KAVEGEEAVSAVVEEEEGQKESQDETPEAQVELPGQEDLEVKAAEQEKRA
SGGVVGEEEVVEPHLPNTFGPCQQEGHVHTDPNDPTSCQPATTQEEGFGS
PQDRTDDRRSSEEGGGGGLVGLGMSVIGVVAIGGVVGVGGVWAWGKFQSG
TRQPGVRYMATDIADHDLGTELGPFGRQYA*
back to top