prot_H-canaliculatus_F_contig1318.2614.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1318.2614.1
Unique Nameprot_H-canaliculatus_F_contig1318.2614.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length156
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1318.2614.1 vs. uniprot
Match: D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 6.900e-47
Identity = 92/145 (63.45%), Postives = 103/145 (71.03%), Query Frame = 0 
Query:   16 LLLDQASKAAACVCPTVYFTPCQYVQGAAVPAPTTVV-RAVVLSKSDQVDINDDITYTADVTTVYSGS--NADEITFITGGNSAACGVDLRIGEEYILGLYPAVADPFDSTD--VTGLLTVGACDLARLWSDVPAVEKADLAAGC 155
            LLL+QA  A+AC C   Y TPC+Y QG  +   TTVV R   LSKS Q DIN+D+T+T  V  VYSG     DEI+F+TGGNSA CGVDL IGEEY+LGLYPA  DPFDST     G LTVG CDLAR+WSDVP  EKADL AGC
Sbjct:   18 LLLNQAFHASACTCLAQYITPCEYAQG--IFTTTTVVFRGTALSKSAQTDINEDVTFTVQVNAVYSGDVDGQDEISFVTGGNSAICGVDLTIGEEYLLGLYPAGDDPFDSTGGGTAGQLTVGLCDLARVWSDVPDDEKADLEAGC 160
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BLAST of mRNA_H-canaliculatus_F_contig1318.2614.1 vs. uniprot
Match: W2TPY4_NECAM (Tissue inhibitor of metalloproteinase n=1 Tax=Necator americanus TaxID=51031 RepID=W2TPY4_NECAM)

HSP 1 Score: 55.1 bits (131), Expect = 1.050e-6
Identity = 39/102 (38.24%), Postives = 52/102 (50.98%), Query Frame = 0 
Query:   56 VLSKSDQVDIND---DITYTADVTTVY-SGSNADEIT--FITGGNSAACGVDLRIGEEYILGLYPAVADPFDSTDVTGLLTVGACDLARLWSDVPAVEKADL 151
            V+SK D     D   DITY      VY   S   +++   +T  NSAACG++L +G EY+LG          S D  G++    C +   WSDVP+ EKADL
Sbjct:   40 VISKKDPNTSPDGLQDITYVVQHICVYRKPSKIKKLSNQIVTASNSAACGIELDVGVEYLLG---------GSVDEKGVVRSFLCGIVEKWSDVPSKEKADL 132
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BLAST of mRNA_H-canaliculatus_F_contig1318.2614.1 vs. uniprot
Match: A0A368GTZ3_ANCCA (Tissue inhibitor of metalloproteinase n=2 Tax=Ancylostoma TaxID=29169 RepID=A0A368GTZ3_ANCCA)

HSP 1 Score: 53.5 bits (127), Expect = 3.980e-6
Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 0 
Query:   56 VLSKSDQVDIND---DITYTADVTTVY-SGSNADEIT--FITGGNSAACGVDLRIGEEYILGLYPAVADPFDSTDVTGLLTVGACDLARLWSDVPAVEKADL 151
            V+SK D     D   D+TYT     VY   S   +++   +T  NSAACGV+L IG EY++G          S D   +L    C +   W+DVPA EKA L
Sbjct:   40 VISKKDPNTSPDGIQDVTYTVQHICVYRKPSKIKQLSSNIVTASNSAACGVELEIGAEYLIG---------GSVDEKNVLHSYLCGIVEKWNDVPAKEKAAL 132
[Close]
BLAST of mRNA_H-canaliculatus_F_contig1318.2614.1 vs. uniprot
Match: A0A0B1T1Z6_OESDE (Tissue inhibitor of metalloproteinase n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1T1Z6_OESDE)

HSP 1 Score: 50.1 bits (118), Expect = 8.180e-5
Identity = 29/61 (47.54%), Postives = 33/61 (54.10%), Query Frame = 0 
Query:   91 TGGNSAACGVDLRIGEEYILGLYPAVADPFDSTDVTGLLTVGACDLARLWSDVPAVEKADL 151
            T  NSAACG+DL IG+EY+LG          S D  G L    C L R W DV A +KA L
Sbjct:   81 TAPNSAACGIDLEIGKEYLLG---------GSVDDKGELQSYLCGLVRRWKDVSAEDKAAL 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1318.2614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCN7_ECTSI6.900e-4763.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W2TPY4_NECAM1.050e-638.24Tissue inhibitor of metalloproteinase n=1 Tax=Neca... [more]
A0A368GTZ3_ANCCA3.980e-638.24Tissue inhibitor of metalloproteinase n=2 Tax=Ancy... [more]
A0A0B1T1Z6_OESDE8.180e-547.54Tissue inhibitor of metalloproteinase n=1 Tax=Oeso... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001820Protease inhibitor I35 (TIMP)PFAMPF00965TIMPcoord: 50..151
e-value: 4.1E-5
score: 23.5
NoneNo IPR availableGENE3D2.40.50.120coord: 43..155
e-value: 1.0E-6
score: 30.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.736
IPR008993Tissue inhibitor of metalloproteinases-like, OB-foldSUPERFAMILY50242TIMP-likecoord: 50..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1318contigH-canaliculatus_F_contig1318:4673..6768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1318.2614.1mRNA_H-canaliculatus_F_contig1318.2614.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1318 4585..9474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1318.2614.1 ID=prot_H-canaliculatus_F_contig1318.2614.1|Name=mRNA_H-canaliculatus_F_contig1318.2614.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=156bp
MGISKIIAAFALASALLLDQASKAAACVCPTVYFTPCQYVQGAAVPAPTT
VVRAVVLSKSDQVDINDDITYTADVTTVYSGSNADEITFITGGNSAACGV
DLRIGEEYILGLYPAVADPFDSTDVTGLLTVGACDLARLWSDVPAVEKAD
LAAGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008993TIMP-like_OB-fold
IPR001820TIMP