prot_H-canaliculatus_F_contig1313.2584.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1313.2584.1
Unique Nameprot_H-canaliculatus_F_contig1313.2584.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length502
Homology
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: A0A6H5JN42_9PHAE (Ribosome biogenesis protein NOP53 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN42_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 5.530e-155
Identity = 289/433 (66.74%), Postives = 317/433 (73.21%), Query Frame = 0
Query:    1 MGRKRGLPARAREKLVAEEAAAAMEVDQKEALLQGKPDEAVFMLDAAGSGTKRRKVQKEAKAAKYLSKNEKKLVVHKYLGKGKPRAASRKRISDPWADEEEGEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVARTADE-GDLQGGDGFEVAPRVPGRNVKRPKQSVRNLAKLSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGDEXXXXXXXXXXXGNAS-LSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQTKRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNKDVIAGRSVPVNLGEELFGSLRQLKAQGSVLLDKVSASK 431
            MGRKR LPARAREKLVAEE A+AMEV+QKEA+LQ KPD+A+F++DAAGSG KRRKV+KEAKAAKYLSKNEKKL+VHK+LGKGKPRA  R RISDPWADE++ E                                                                        +  +A E G  QGG+ F  +PRVPGRN KRPK S RNLAKL VCHPGQSYNP EEDH+DVLASAVAVELKRQEAIEEE APISAGMS+ETLA+I    XXXXXXXXXXX   + LSLGKPTPASGKLTRAQRNKQKRAKAAK+ELAV++N+K M KSIDQVTALQ+EVAEQERLR ERRQTKRLLK QKAK+EAEGAAAGGVFGPS GVAA+ + R NNKDVIAGRSVPVNLGEEL GSLRQLKAQGSVL DKV   K
Sbjct:    1 MGRKRRLPARAREKLVAEEVASAMEVEQKEAVLQRKPDKALFVVDAAGSGRKRRKVEKEAKAAKYLSKNEKKLIVHKFLGKGKPRAVGRNRISDPWADEDQDE-------------------------------ATNNKKPQEALPPSTPGEKEAEDSNPLLSLKGGAAAKATAAMEESAREPGGRQGGEYFVTSPRVPGRNAKRPKHSARNLAKLGVCHPGQSYNPAEEDHDDVLASAVAVELKRQEAIEEESAPISAGMSEETLAVIXXXXXXXXXXXXXXXXXTTGLSLGKPTPASGKLTRAQRNKQKRAKAAKHELAVRRNRKHMIKSIDQVTALQQEVAEQERLREERRQTKRLLKAQKAKVEAEGAAAGGVFGPSAGVAALSTKRQNNKDVIAGRSVPVNLGEELHGSLRQLKAQGSVLHDKVELLK 402          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: A0A835YY73_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY73_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.230e-17
Identity = 74/239 (30.96%), Postives = 115/239 (48.12%), Query Frame = 0
Query:  202 VKRPKQSVRNLAKLS-------VCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGDEXXXXXXXXXXXGNASLSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQTKRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNKDVIAGRSVPVNLGEELFGSLRQLKAQGSVLLDKVSASKEL 433
            V R +      AKL+       +  PGQSYNP + DHE+ +A AVA+ELKR++A++   API+ G+S ETLAL++GD+          X      +      +GK+TR                      K       ++ A+  E+ +Q + R+E R+ K++LK  K  +  + A                       DV+   S+PVNL EEL GSLRQ++ +GS+L+D+V+  K +
Sbjct:   95 VVRARNGTDRSAKLTSYALGAPMALPGQSYNPEQGDHEEAVAEAVALELKREDAVKAANAPIAQGLSAETLALLVGDDEGSSSDEDSGXXXXXXDITLAKKQTGKMTRXXXXXXXXXXXXXXXXXXXXXXKSSTHEQHRIKAIGAELEQQAKDRAEARKAKQMLKANKDGVPLKDA-----------------------DVMQAPSIPVNLAEELSGSLRQMRTRGSLLVDRVAMLKRV 310          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: B8BPY1_THAPS (Ribosome biogenesis protein NOP53 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BPY1_THAPS)

HSP 1 Score: 92.4 bits (228), Expect = 2.270e-16
Identity = 95/258 (36.82%), Postives = 135/258 (52.33%), Query Frame = 0
Query:  191 FEVAPRVPGRNVKRPKQSVRNLAKLS--------VCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGD----EXXXXXXXXXXXGN-ASLSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQTKRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNKDVIAGRSVPVNLGEELFG------SLRQLKAQGSVLLDKVSA 429
            FEV  + P + +       R  A+L+        V HPGQSY P +E H+D +  A+++E++R EA E +  PIS+GMS+ T   I+G+    EXXXXXXXXXXXGN A++   K      KLTRAQRNKQKR KA +  L  +K  KQ    I++V    K V E+E+L S R+     L+ +K              G +   A       +  D +   S+PV L EEL G      SLR +  +GS++ D++ +
Sbjct:  194 FEVLSQQPTKALSNKHLKARKHAQLTAKPTLALEVAHPGQSYRPDKEQHQDAIGEALSIEIRRNEAEEYKSKPISSGMSEFTKRFIVGESDSEEXXXXXXXXXXXGNVATMGATKLIKKKEKLTRAQRNKQKRVKAEQTALFARKQSKQFNHQINEVHKHSKAVKEEEKLHSVRQSELAQLRDEKKSQP---------LGKNLWNAV------SQVDPLRAPSLPVALTEELEGKSGGKGSLRTVTPKGSLVTDRLES 436          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: A0A7S2JT46_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JT46_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.310e-15
Identity = 84/245 (34.29%), Postives = 133/245 (54.29%), Query Frame = 0
Query:  192 EVAPRVPGRNVKRPKQSVRNLAKLSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALII----GDEXXXXXXXXXXXGNASLSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQT-KRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNK-DVIAGRSVPVNLGEELF-GSLRQLKAQGSVLLDKVSA 429
            E A R   ++     +  +    + + H GQSY P +E H+DV+  A+AVEL+R++A+E  R P+  GMSKETLAL+      D  XXXXXXX   G A+    +P     KLTRAQRN+QKR +    E+  +K  K+  +S+ +V  + K +  +E  + ER+Q    LL+ +KA+                GV  +   + ++K D I   ++PV L  E+  GSLR +K +GS++ +++ +
Sbjct:  172 EAARRAQRKSKPHTHKQQQPKVAVDLPHGGQSYQPDKEQHQDVIGEALAVELRRKDAVEYRRTPLWNGMSKETLALLDTRSDSDSDXXXXXXXDEGGIAAAGNFQPKKKKEKLTRAQRNRQKRVRQHDVEMQKQKRLKKFNQSVMEVKTISKTLRREEADKKERKQQLNELLEKKKAE--------------PLGVNLV--EKLSSKIDPINAPALPVALSSEIAQGSLRSIKPKGSLMSERLES 400          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: B5Y3Y8_PHATC (Ribosome biogenesis protein NOP53 n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3Y8_PHATC)

HSP 1 Score: 80.5 bits (197), Expect = 1.340e-12
Identity = 69/238 (28.99%), Postives = 115/238 (48.32%), Query Frame = 0
Query:  193 VAPRVPGRNVKRPKQSVRNLAKLSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGDEXXXXXXXXXXXGNASLSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQTKRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNKDVIAGRSVPVNLGEELF-GSLRQLKAQGSVLLDKVSA 429
             AP       ++ K   +    + V   GQSY P    H+ ++  AV +E++R +AIE  R PI+ G+S+ET AL++ D                +  G     + KLT+AQRNKQ+R +  +  L +K+ +K++ K + +V   +KE+   ER + +        + ++ K EAE     G+       A         KD I+  + PV L  E+   SLR +K +GS+L D++S+
Sbjct:  155 TAPEACVIKAQKAKVQPKLAVAVDVAKDGQSYRPDPNAHKSIIQKAVDLEMRRGKAIEYNRTPIAQGLSEETKALLVEDTDSEDEESDVENETEDILAGSLPRRTDKLTKAQRNKQRRLRKEQVLLEMKRREKKLMKQVGEVGRYRKELTRAEREKKD--------EVERQKAEAEKKRPLGIDLEHQHAA---------KDPISTPTYPVALPNEIQRSSLRTIKPKGSLLTDRMSS 375          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: K0TBJ2_THAOC (Ribosome biogenesis protein NOP53 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TBJ2_THAOC)

HSP 1 Score: 77.4 bits (189), Expect = 1.530e-11
Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 0
Query:  192 EVAPRVPGRNVKRPKQS---VRNLAKLSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGDEXXXXXXXXXXXGNASLSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQV 334
            + AP++  + +K  + +     N   + V HPGQSY+P +E H+D +  A+++E++R EA++ +R PIS GMS+ T   II +  XXXXXXXXXX   ++S  K      KLTRAQRNKQKR KA +  L  ++ +K+    + +V
Sbjct:  182 QPAPKLSNKQLKARRNAELAAPNKLAVEVAHPGQSYHPDKEHHQDAIGEALSIEIRRNEALDYKRKPISDGMSQFTKEFIINNSDXXXXXXXXXXTATNVST-KIIKRKEKLTRAQRNKQKRVKAEETALKERRERKKFMHQVHEV 326          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: A0A7S4UQA2_9STRA (Ribosome biogenesis protein NOP53 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UQA2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.710e-11
Identity = 63/158 (39.87%), Postives = 95/158 (60.13%), Query Frame = 0
Query:  215 LSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALII--GDEXXXXXXXXXXXGNASLSLGKPTPAS------GKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQTKRLLKTQKAK 364
            + + H GQSYNP E  H+DV+  A+++ELKR+EA+   + PIS G+SKETLA+++   DE XXXXXXXXXX   +    +P   S       K TR QRNKQKR +     +  +K +K     +++     KE+ ++ERL+ ER +  + ++ +K K
Sbjct:  218 IELAHGGQSYNPDENQHQDVIGEALSIELKREEALAYRKTPISNGLSKETLAIMVHSSDEEXXXXXXXXXXXXXNNDSFQPRLKSKVINRENKKTRVQRNKQKRTREEHASIQQRKKQKTFLHEVNEAKLRAKEIKQEERLQKERAEYLKRVQEEKRK 375          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: A0A448ZT81_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZT81_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.870e-10
Identity = 78/237 (32.91%), Postives = 122/237 (51.48%), Query Frame = 0
Query:  205 PKQSVRNLAKLSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGD---EXXXXXXXXXXXGNASLSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQTKRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNKDVIA---------GRSVPVNLGEELFG--SLRQLKAQGSVLLDKV 427
            PK   R    + +   GQSYNP ++DH++ +  A+ VE KR+ A +  +   S GM  ET AL++GD   E    XXXXXXX   + ++ K  P   K+TRAQRNKQKR +A +YE+  +K +KQ A  +  V ++ + + ++E   +ER++TK   K ++ K++ E                    R   KD+             + PV L  EL    SLR +K +GS++ D++
Sbjct:  179 PKNKDRAPVMVDLAGSGQSYNPDQKDHKNAIQKALLVETKRKVAEKNAKESASQGMRPETRALLLGDSDSEDESDXXXXXXXXPTTEAIAKKRPE--KMTRAQRNKQKRIRAEQYEIKQRKKQKQFAHELRGVKSVNRTLXKEE---AERKKTKE--KIEQLKLDTE--------------------RSKGKDLYTQLAEENPRYAPTYPVALPGELRSGASLRTIKPKGSLVTDRM 388          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: A0A7S0CMX1_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CMX1_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.560e-8
Identity = 66/227 (29.07%), Postives = 114/227 (50.22%), Query Frame = 0
Query:  215 LSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGDEXXXXXXXXXXXGNASLSLGKPTPASGKLTRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSERRQTKRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNKDVIAGRSVPVNLGEELFGS---------LRQLKAQGSVLLDKVSASKE 432
            + V H GQSY+P  E H+DV+  A+A+ELKR+EA+E  + PI A MS+ETL ++I ++               +   K      K+ R  RN+++R  A +     +K +KQ   ++  V +  K+V + E    E+R     ++T K +  A+     G+           +++ + KD I   S+PV L  EL GS         LR++K +G++L ++V + ++
Sbjct:    3 IEVAHGGQSYHPDGELHQDVIGEALAMELKREEAMEYLKTPI-AEMSEETLRILINEDSESEEEEDIETMETDVYRKKQE----KIPRNVRNRRRRHAALQLVYLERKKQKQFLSTVHFVKSAHKKVRKDELTNQEKRDQ---IQTWKDEEIAQNPLGHGM-----------ASKLSEKDPIRFPSLPVALTSELNGSKDNGNVNVPLRRVKPKGNLLEERVYSLRD 210          
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Match: A0A7S4AFH2_9STRA (Ribosome biogenesis protein NOP53 n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AFH2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.730e-7
Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 0
Query:  202 VKRPKQSVRNLAKLSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIEEERAPISAGMSKETLALIIGDEXXXXXXXXXXX-----------GNASLSLGKPTPASGKLTRAQRNKQKRAKAAKYEL 318
             + PK   R    + +   GQSYNP  +DH   +  A+ VE KR +A +E +   S GM+ ET AL++GD     XXXXXXX           G  + S+ +  P   K+TRAQRNKQKR +A +YE+
Sbjct:  167 AQAPKNKDRAPVTVDLAKSGQSYNPDHKDHRSAIEEALLVETKRDKAEKEAKLSASQGMTPETRALLLGDTDTEDXXXXXXXXXXXXXDGGDEGIETKSIAQKRPE--KMTRAQRNKQKRVRAEQYEI 292          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1313.2584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JN42_9PHAE5.530e-15566.74Ribosome biogenesis protein NOP53 n=2 Tax=Ectocarp... [more]
A0A835YY73_9STRA1.230e-1730.96Ribosome biogenesis protein NOP53 n=1 Tax=Tribonem... [more]
B8BPY1_THAPS2.270e-1636.82Ribosome biogenesis protein NOP53 n=1 Tax=Thalassi... [more]
A0A7S2JT46_9STRA3.310e-1534.29Ribosome biogenesis protein NOP53 n=1 Tax=Leptocyl... [more]
B5Y3Y8_PHATC1.340e-1228.99Ribosome biogenesis protein NOP53 n=1 Tax=Phaeodac... [more]
K0TBJ2_THAOC1.530e-1140.41Ribosome biogenesis protein NOP53 n=1 Tax=Thalassi... [more]
A0A7S4UQA2_9STRA1.710e-1139.87Ribosome biogenesis protein NOP53 n=2 Tax=Ditylum ... [more]
A0A448ZT81_9STRA1.870e-1032.91Ribosome biogenesis protein NOP53 n=1 Tax=Pseudo-n... [more]
A0A7S0CMX1_9STRA4.560e-829.07Ribosome biogenesis protein NOP53 n=1 Tax=Probosci... [more]
A0A7S4AFH2_9STRA1.730e-739.84Ribosome biogenesis protein NOP53 n=1 Tax=Pseudo-n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 327..364
NoneNo IPR availablePANTHERPTHR14211:SF7RIBOSOME BIOGENESIS PROTEIN NOP53coord: 27..427
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PFAMPF07767Nop53coord: 31..427
e-value: 1.1E-32
score: 114.0
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PANTHERPTHR14211GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2coord: 27..427

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1313contigH-canaliculatus_F_contig1313:5063..10962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1313.2584.1mRNA_H-canaliculatus_F_contig1313.2584.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1313 2534..11102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1313.2584.1 ID=prot_H-canaliculatus_F_contig1313.2584.1|Name=mRNA_H-canaliculatus_F_contig1313.2584.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=502bp
MGRKRGLPARAREKLVAEEAAAAMEVDQKEALLQGKPDEAVFMLDAAGSG
TKRRKVQKEAKAAKYLSKNEKKLVVHKYLGKGKPRAASRKRISDPWADEE
EGEPEEGGGQEKRGNQGALVTSAAAGEKKERRGRKNEELLLTLGNGGGGK
PGGAKSKEAIAAAASTAAAAGAAAVVARTADEGDLQGGDGFEVAPRVPGR
NVKRPKQSVRNLAKLSVCHPGQSYNPTEEDHEDVLASAVAVELKRQEAIE
EERAPISAGMSKETLALIIGDEDDESSSDEEDDGNASLSLGKPTPASGKL
TRAQRNKQKRAKAAKYELAVKKNKKQMAKSIDQVTALQKEVAEQERLRSE
RRQTKRLLKTQKAKIEAEGAAAGGVFGPSTGVAAMGSARCNNKDVIAGRS
VPVNLGEELFGSLRQLKAQGSVLLDKVSASKELSWLATSFDVPVLKSLIY
ATSFVEDRYRLCSLFPSGLRDAFDRSITCLSSPGTAVWPGLERYLLDTSH
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011687Nop53/GLTSCR2