prot_H-canaliculatus_F_contig13.2488.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig13.2488.1
Unique Nameprot_H-canaliculatus_F_contig13.2488.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length613
Homology
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Match: A0A6H5K4H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4H2_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 1.980e-53
Identity = 142/334 (42.51%), Postives = 182/334 (54.49%), Query Frame = 0
Query:   25 SSQCLEAIAILLDQSSPKGGIRQTPYLASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLWMAPRARHGPSCCSDRSDDDQLTACHHYLGELVGPVETRSRVPPLLPFSVTCRLSSDDLSKG-RTTELWTDVERLRLNIADPASSRWKS---VVLPRRLKQLLLVGASQGFVKYGWPVHPLPVAVLSPLSTHTSTSLSPLLLLVKLYIDGNFHAPLKTIEWPPSLRQLSFGTRFCQPIGCG--------VRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFFGGGFNESLTADLVAWPPNLRKLVLGYGFKKSITGDVWPSSLQDLSLG 346
            S++CLEAI ++L+QSSPKGGIR+ P+++STL+LQL  LE+CRVCRS  +LH+T+    P+ LW+AP +        D      L  C+   G       T +RVPPLLPFSVTC  +S  LS   RT + W  VERLRL  +      WK    VVLP RLK LLL+ +   FV+     + LPVAVLS          SP  LL+KL+++G+F  P+  + WPPSL Q+SFG+RF Q +G G        V  XXXXXXXXXX                   L FFG GFNE L   + +WP +LRK                    Q+LSLG
Sbjct:   40 SARCLEAITVVLNQSSPKGGIREPPFISSTLQLQLACLELCRVCRSLPSLHITVRETLPSSLWVAPTSSDDAGDHDDGVLLPSLRRCYPRGGMRGKDGVTPNRVPPLLPFSVTCGYASLPLSSSSRTADRWAGVERLRLEFSVSEIENWKESPLVVLPGRLKHLLLISSYFDFVQNRIGNYRLPVAVLS----------SPPPLLLKLFVNGSFEVPVADVPWPPSLIQISFGSRFQQRLGRGGAGSAVDGVIKXXXXXXXXXXRHQFEEPIAEVSWPSSLERLAFFGPGFNEPLAGVVASWP-SLRKXXXXXXXXXXXXXXXXXXXXQELSLG 362          
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Match: A0A6H5L2G4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2G4_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 1.980e-50
Identity = 154/367 (41.96%), Postives = 194/367 (52.86%), Query Frame = 0
Query:   16 NSGNISNSE---SSQCLEAIAILLDQSSPKGGIRQTPYLASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLWMAPRARHGPSCCSDRSDDDQLTACHHYLGEL-------------VGPVETRSRVPPLLPFSVTCRLSS-DDLSKGRTTELWTDVERLRLNIADPASSRWKS---VVLPRRLKQLLLVGASQGFVKYGWPVHPLPVAVLSPLSTHTSTSLSPLLLLVKLYIDGNFHAPLKTIEWPPSLRQLSFGTRFCQPIG----C------------GVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFFGGGFNESLTADLVAWPPNLRKLVLGYGFKKSITGDVWPSSLQDLSLG 346
            N+GNIS+++   S++C+EAIA++L+QSSP+GGIR+ P+++STL+LQL  LE+C VCRS  +LHV +    PA L +AP +        D  D D           L              G   T +RVPPLLPFSVTC LSS    S  RT +LWT VERLRL  +   +S WK    V+LPRRLKQLL V +S  FV    P   LPVAVLS          SP  LL+KL+++G+F  P+  + WPPSL QLSFG RF Q +G    C            GV  XXXXXXXXXX                   L FFG GFNE L   + +WP +LRK                 +SL+ L  G
Sbjct:   25 NTGNISDNDNRGSTRCMEAIAVVLNQSSPRGGIREPPFISSTLQLQLACLELCGVCRSLPSLHVKVPETLPACLSVAPTSD------DDAGDHDNGVQWQDLFSTLRSLRRWYPGGDSRQGDGVTLNRVPPLLPFSVTCGLSSLPRSSSSRTADLWTGVERLRLEFSLSETSSWKDSSVVMLPRRLKQLLFVSSS--FV----PNFQLPVAVLS----------SPPPLLLKLFVNGSFEVPVADVPWPPSLTQLSFGARFQQRLGRGGACSAGDGDSDGGGGGVIKXXXXXXXXXXWHHFQEPVAEINWPASLERLAFFGPGFNEPLAGVVSSWP-SLRKXXXXXXXXXXXXXXXXXASLRALEFG 368          
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 2.920e-12
Identity = 58/160 (36.25%), Postives = 77/160 (48.12%), Query Frame = 0
Query:   27 QCLEAIAILLDQSSPKGGIRQTPYLASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLWMAPRARHGPSCCSDRSDDDQLTACHHYLGELVGPVETRSRVPPLLPFSVTCRLSSDDLSKGRTTELWTDVERLRLNIADPASSRWKSVVLPRRLKQLLL 186
            +CL+A  I L Q+   G  R   + ASTLELQL SL++CR CR+ S LHV +   +P  LW +  A+  P+  S                     +   SRVP +    +T  LS + L +    ELWT  ERL L  +   SS    VV PR L QL+L
Sbjct:   10 RCLDAFVIALSQACEGGEKR---WYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWN-------------------LHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVL 147          
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.660e-7
Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 0
Query:   26 SQCLEAIAILLDQSSPKGGIRQTPYLASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLWMAPRARHGPSCCSDRSDDDQLTACHHYLGELVGPVETRSRVPPLLPFSVTCRLSSDDLSKGRTTELWTDVERLRLNIADPASSRWKSVVLPRRLKQLL 185
            S+CL+A  + L+Q+      ++  +  STLELQLVSLEVC  CR   TLHV +   +P  LW  P   H  +  ++RS    ++                SRVP +  F +T  L    L +   TE+ +     R N    A+S  +S V P+RLK+++
Sbjct:    7 SKCLDAFVVALNQACDG---QEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWF-PSQNH--TTTNNRSPKVCIS----------------SRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASL-ESAVWPQRLKRMV 143          
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Match: D7G241_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G241_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 4.800e-7
Identity = 48/136 (35.29%), Postives = 67/136 (49.26%), Query Frame = 0
Query:   26 SQCLEAIAILLDQSSPKGGIRQTPYLASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLWMAPRARHGPSCCSDRSDDDQLTACHHYLGELVGPV-ETRSRVPPLLPFSVTCRLSSDDLSKGRTTELWTDVERL 160
            SQCLEA  + LD +          + AST +LQL SL++C+ CR   TL +++  ++P  LW    A  GP          +LT      GE   P   TR+RVPP  P  V  +L + +L   R  ELW +V+ L
Sbjct:   10 SQCLEAFVVALDLTCDG-----EKWYASTQQLQLASLDLCKACRGVPTLALSVERSTPEYLWA--EAARGPR--------GRLT------GEKKPPAARTRTRVPPFGPRRVMWKLRARELGLARK-ELWANVQCL 123          
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 6.730e-6
Identity = 50/157 (31.85%), Postives = 73/157 (46.50%), Query Frame = 0
Query:   29 LEAIAILLDQSSPKGGIRQTPYLASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLWMAPRARHGPSCCSDRSDDDQLTACHHYLGELVGPVETRSRVPPLLPFSVTCRLSSDDLSKGRTTELWTDVERLRLNIADPASSRWKSVVLPRRLKQLL 185
            L+ + + L+Q+      ++  +  STLELQLVSLE+C  CRS   LHV +  ++P  LW +  +R  PS    RS +                V T +RVP +     T  L  D L +    E     ER RL      ++  +SVV P  LK+L+
Sbjct:   90 LDTLIVALNQACDG---QEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPS---QRSPE----------------VCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTER-RLQDGHSFAASVESVVWPESLKRLV 223          
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Match: D7G0Z9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 1.090e-5
Identity = 28/62 (45.16%), Postives = 38/62 (61.29%), Query Frame = 0
Query:   26 SQCLEAIAILLDQSSPKGGIRQTPYLASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLW 87
            S+CL+A  + L+Q+      ++  + ASTLELQLVSLE C  CR   TLHV +   +P  LW
Sbjct:   39 SKCLDAFVVALNQTCDG---QEKRWYASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLW 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig13.2488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5K4H2_9PHAE1.980e-5342.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2G4_9PHAE1.980e-5041.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LIJ3_9PHAE2.920e-1236.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNI6_9PHAE1.660e-732.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G241_ECTSI4.800e-735.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTK8_ECTSI6.730e-631.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0Z9_ECTSI1.090e-545.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 208..435
e-value: 2.3E-10
score: 41.4
IPR008615FNIPPFAMPF05725FNIPcoord: 526..567
e-value: 8.4E-6
score: 25.9
coord: 402..434
e-value: 1.2E-4
score: 22.1
coord: 348..389
e-value: 2.2E-6
score: 27.7
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 177..307
coord: 289..501
coord: 402..588
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 221..544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig13contigH-canaliculatus_F_contig13:89027..90865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig13.2488.1mRNA_H-canaliculatus_F_contig13.2488.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig13 87683..94125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig13.2488.1 ID=prot_H-canaliculatus_F_contig13.2488.1|Name=mRNA_H-canaliculatus_F_contig13.2488.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=613bp
MKSSCSSSNSDKSIGNSGNISNSESSQCLEAIAILLDQSSPKGGIRQTPY
LASTLELQLVSLEVCRVCRSPSTLHVTLSANSPAGLWMAPRARHGPSCCS
DRSDDDQLTACHHYLGELVGPVETRSRVPPLLPFSVTCRLSSDDLSKGRT
TELWTDVERLRLNIADPASSRWKSVVLPRRLKQLLLVGASQGFVKYGWPV
HPLPVAVLSPLSTHTSTSLSPLLLLVKLYIDGNFHAPLKTIEWPPSLRQL
SFGTRFCQPIGCGVRWPSSLQQLSFKHRFTESITAQDMWPRSLERLVFFG
GGFNESLTADLVAWPPNLRKLVLGYGFKKSITGDVWPSSLQDLSLGGFNE
SIDAVVWPASLEKLTFGKDFNQPVTRAVWPVGLQELTFGASFCQTVHGVA
WPQSLRKLTFGIRFNKPVACSRLPASLQELNFGQGFDESLDGAASLVVLQ
KLTFGNGSNQQVFPLPDSLRELTVWSRFLGPLDDRLLPRSLVKLTLGPLF
NRRVIGVVWPDSLEELSFGEHCTGNFNQPIVGVRWPRSLRRLTFGVYFNQ
PIIGVSWPAALQEIHFGRHFFRPTAGIRWPPSLKAIYICRVWYSGDGGLM
KPCTRSCPMEYT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf