prot_H-canaliculatus_F_contig1297.2467.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1297.2467.1
Unique Nameprot_H-canaliculatus_F_contig1297.2467.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length90
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1297.2467.1 vs. uniprot
Match: D8LTK3_ECTSI (Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTK3_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 6.030e-17
Identity = 52/89 (58.43%), Postives = 56/89 (62.92%), Query Frame = 0 
Query:    1 MRLLSTTEYTLVILRSPELSSSADTSKTESSRATGAAGVLFLLTFLYCLGYPVLRAFRREKERGVPRDASERRRQQGSRGVVMAGDYAT 89
            MRLLSTTEYTLVILRSPEL S+ADTS            VL LL+ LYCLGYPV+RAFRR K      D   R   + S   V AGDYAT
Sbjct:  458 MRLLSTTEYTLVILRSPELFSNADTSDXXXXXXXXXXXVLLLLSVLYCLGYPVVRAFRRAKS--GQEDPEGREEWRSSAAAVAAGDYAT 544
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1297.2467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTK3_ECTSI6.030e-1758.43Metallophosphoesterase n=2 Tax=Ectocarpus TaxID=28... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..89
NoneNo IPR availableTMHMMTMhelixcoord: 32..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1297contigH-canaliculatus_F_contig1297:26336..26935 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1297.2467.1mRNA_H-canaliculatus_F_contig1297.2467.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1297 24524..27510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1297.2467.1 ID=prot_H-canaliculatus_F_contig1297.2467.1|Name=mRNA_H-canaliculatus_F_contig1297.2467.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=90bp
MRLLSTTEYTLVILRSPELSSSADTSKTESSRATGAAGVLFLLTFLYCLG
YPVLRAFRREKERGVPRDASERRRQQGSRGVVMAGDYAT*
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