prot_H-canaliculatus_F_contig12875.2397.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12875.2397.1
Unique Nameprot_H-canaliculatus_F_contig12875.2397.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length657
Homology
BLAST of mRNA_H-canaliculatus_F_contig12875.2397.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 676 bits (1743), Expect = 5.200e-218
Identity = 456/633 (72.04%), Postives = 485/633 (76.62%), Query Frame = 0
Query:   43 DGVSPADLAPYGEAELSTALSVPPGRLQRLAAEANPFDNRFLVPADAAGRVREAVARLVSLADESGPAGRTLECEALEAAADCVEACFRRQNTPAVKQEE---KQGQFPSPLKPWVSGGRDPTASAATSSVAVMPSSQAFDEDVSAPLATAVIRSLRFFRAAAAGTEAASIPGEDDEGERGGGRGGGGYTPAVAIQADGSITVDDGHRRVALAGLRLAGAVATAPGPARALLEAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHVDVLRVFLTRWEGDPAGGVAGAADNLADGAVGG-AGGLARLGGYEACASVLSRQVSHPAALSRGRSIMQYVALVECLQLVRSLAAKVGTVAXXXXXXXXXXXXXAGSDGGVLAD-----------GPVAVKGMEELAHALGALEALLSEGAGDTSASGIQPGIRKGDRKRRLQGFEVLLAKADAESGDGASTANGNAPRAADNADPNVAAAISDHLGREAARDKRPRGGLAPSLVALLWEHQLPAALAAGVASAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LVFAAVRRVALRLLRGAGDPLSGALVFAGQPRSTAALTFALDPSALATPVGPEGSATMEALADGLDE 657
            DGVSPADLAPYGEAELSTAL+VPP RLQR AAEANPFD+RFLVPADAA  V+EAVARLVSLADESGPAGR LECEAL+AAADCVEACFRRQ TPA K EE   + G  PSP    V+  +  T +   ++  V+PSS+AF++DVS PLATAVIRSLRFFRAAAAGTEA SIP  + E ERGGGR    +TPAVA+ ADGS+TVDDGHRRVALAGLRLAGAVATAP PA ALL AGGFHVLWRLPLDPAATPMGVALALGALCQGIRH DVLRVFLTRWE           + + DGA G  A GL+RLGGYEACASVLSRQV+HPAALSRGRSIMQYVALVECLQLVR LA K GT                G DG                GP AVKGME+LAHALGALEAL+SEGAG+TSASGIQPGIRKGDRKRRLQGFEVLLAKA                                      ARDKRPRGGLAPSLVALLWEHQLPAALAAGVA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LVFA VR+VALRLLRGAGDPLSGALVFAGQPRSTAAL + LDPSALATPVGPE S T+EALADGLD+
Sbjct:  288 DGVSPADLAPYGEAELSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLADESGPAGRNLECEALDAAADCVEACFRRQ-TPAKKGEEGGQQGGLVPSP----VAVEQGSTVATTGTTATVVPSSEAFNDDVSGPLATAVIRSLRFFRAAAAGTEAGSIPAGEGEEERGGGR----HTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPAGALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWE-----------EGVDDGAGGAEAEGLSRLGGYEACASVLSRQVAHPAALSRGRSIMQYVALVECLQLVRKLATKAGTTVAAAKAAEA-----TGKDGXXXXXXXXXXXXXXXXGPAAVKGMEDLAHALGALEALMSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAKA--------------------------------------ARDKRPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGAGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPESSPTIEALADGLDQ 857          
BLAST of mRNA_H-canaliculatus_F_contig12875.2397.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 673 bits (1736), Expect = 5.270e-216
Identity = 473/632 (74.84%), Postives = 513/632 (81.17%), Query Frame = 0
Query:   43 DGVSPADLAPYGEAELSTALSVPPGRLQRLAAEANPFDNRFLVPADAAGRVREAVARLVSLADESGPAGRTLECEALEAAADCVEACFRRQNTPAVKQEE--KQGQF-PSPLKPWVSGGRDPTASAATSSVAVMPSSQAFDEDVSAPLATAVIRSLRFFRAAAAGTEAASIPGEDDEGERGGGRGGGGYTPAVAIQADGSITVDDGHRRVALAGLRLAGAVATAPGPARALLEAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHVDVLRVFLTRWEGDPAGGVAGAADNLADGAVGG-AGGLARLGGYEACASVLSRQVSHPAALSRGRSIMQYVALV-------ECLQLVRSLAAKVG---TVAXXXXXXXXXXXXXAGSDGGVLADGPVAVKGMEELAHALGALEALLSEGAGDTSASGIQPGIRKGDRKRRLQGFEVLLAKADAESGDGASTANGNAPRAADNADPNVAAAISDHLGREAARDKRPRGGLAPSLVALLWEHQLPAALAAGVASAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LVFAAVRRVALRLLRGAGDPLSGALVFAGQPRSTAALTFALDPSALATPVGPEGSATMEALADGLDE 657
            DGVSPADLAPYGEA+LSTAL+VPP RLQR AAEANPFD+RFLVPADAA  V+EAVARLVSL DESGPAGR LECEAL+AAAD +EACFRRQ T A K EE  KQG   PSP    V+  +  T + A ++ AV+PSS+AF++DVS PLATAVIRSLRFFR AAAGTEA SIP  + E ERGGGR    +TPAVA+ ADGS+TVDDGHRRVALAGLRLAGAVATAP PARALL AGGFHVLWRLPLDPAATPMGVALALGALCQGIRH DVLRVFLTRWE           + + DGA G  A GL+RLGGYEACASVLSRQV+HPAALSRGRSIM             EC +  R    + G      XXXXXXXXXXXXX        A GP AVKGME+LAHALGALEAL+SEGAG+TSASGIQPGIRKGDRKRRLQGFEVLLAKADA++GD +STA  ++     + DPNVAAAIS HLGREAARDK+PRGGLAPSLVALLWEHQLPAALAAGVA     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LVFA VR+VALRLLRG+GDPLSGALVFAGQPRSTAAL + LDPSALATPVGPEGS T+EALADGLD+
Sbjct:  274 DGVSPADLAPYGEADLSTALTVPPERLQRSAAEANPFDDRFLVPADAARGVKEAVARLVSLVDESGPAGRNLECEALDAAADRMEACFRRQ-TAAKKGEEGGKQGGLGPSP----VAVEQGSTLATAGTTAAVVPSSEAFNDDVSGPLATAVIRSLRFFRTAAAGTEAGSIPAGEGEEERGGGR----HTPAVAVLADGSVTVDDGHRRVALAGLRLAGAVATAPSPARALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWE-----------EGVDDGAGGAEAEGLSRLGGYEACASVLSRQVAHPAALSRGRSIMHRGEGGGGDGQGREC-RWGRGGCRRGGGGXXXXXXXXXXXXXXXXXXXXAAAAAAAGPAAVKGMEDLAHALGALEALVSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAKADAKTGDASSTAAPDSNSNNKSDDPNVAAAISAHLGREAARDKQPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGSGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPEGSPTIEALADGLDQ 884          
BLAST of mRNA_H-canaliculatus_F_contig12875.2397.1 vs. uniprot
Match: A0A835ZHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG1_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.540e-5
Identity = 138/466 (29.61%), Postives = 188/466 (40.34%), Query Frame = 0
Query:  227 GYTPAVAIQA--DGSITVDDGHR--RVALAGLRLAGAVATAPGPARALLEAGGFHVLWRLPLDPAATPMGV-ALALGALCQGIRHVDVLRVFLTRWEGDPAGGVAGAADNLADGAVGGAGGLARLGGYEACASVLSRQ-VSHPAALSRGRSIMQYVALVECLQLVRSLAAKVGTVAXXXXXXXXXXXXXAGSDGGV--LADGPVAVKGMEELAHALGALEALLSEGAGDTSAS-----------------GIQPGIRKGDRKRRLQGFEVLLAKADAESGDGASTANGNAPRAADNADPNVAAAISDHLGREAARDKRPRG---------GLAPSLVALLWEHQLPAALAAGVASAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFAAVRRVALRLLRGAGDPLSGALVFAGQPRSTAALTFALDPSALATPVGPEGSAT-MEALADGLDE 657
            G+ PA    A  DG  T  +G    R A A L+L  A+  AP  A A   AGG   L R  L     P G+ ALA+GAL Q  +H  +L              V+ A D+  + A            YEA  +   R    H A  +    +M  VA ++C++  +  A + G  A              G+ GG   LA    A+ G + L     A +A   EGA D +A                  G +P +   +  + L   EVLLA+       G +  +G+A R A +A+ N    I+ H    A  +    G         G +P+L+ LL  H + A LA   A+   A         XXXXXXXXX                      + AA+R +ALRLL G G+   G+LVFA  P +T  L  ALD SAL    G  G    +EALADG  +
Sbjct:  348 GFGPAGGDGAFCDGRKTGLEGEAGVRAARAALQLLEAMLVAPSLAYAFAAAGGLLCL-RTALLSHRVPAGLKALAMGALAQACQHESLLHA------------VSAAPDDGGESA------------YEAAVAAAMRYGARHGALRACAELVMAAVAALDCVRAAQDCAMEAGLAAVGEPP---------GASGGERRLAALSRALLGKDPLPPVSDAAQAAEPEGA-DAAAPPPLKRLPQWKPALAPSFGAKPLL---ELAQALFAMEVLLARPCLPMA-GVALLDGSAIRGATHANFN----INLHAANTAPAELLQEGHSGATAAHRGFSPALLRLLRRHGIVATLAVAAAAVGRAAVADCRHGGXXXXXXXXXE---------------------LLAAIRALALRLLGGGGEAFIGSLVFAAAPEATEVLVAALDGSALRR--GARGGVLPLEALADGAPQ 747          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12875.2397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBI8_ECTSI5.200e-21872.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNJ9_9PHAE5.270e-21674.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHG1_9STRA1.540e-529.61Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12875contigH-canaliculatus_F_contig12875:54..3417 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12875.2397.1mRNA_H-canaliculatus_F_contig12875.2397.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12875 54..3417 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12875.2397.1 ID=prot_H-canaliculatus_F_contig12875.2397.1|Name=mRNA_H-canaliculatus_F_contig12875.2397.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=657bp
PAGPSVPAGLSPPKGGGPPGATICGGGSGGGEPRLAGGGGAVDGVSPADL
APYGEAELSTALSVPPGRLQRLAAEANPFDNRFLVPADAAGRVREAVARL
VSLADESGPAGRTLECEALEAAADCVEACFRRQNTPAVKQEEKQGQFPSP
LKPWVSGGRDPTASAATSSVAVMPSSQAFDEDVSAPLATAVIRSLRFFRA
AAAGTEAASIPGEDDEGERGGGRGGGGYTPAVAIQADGSITVDDGHRRVA
LAGLRLAGAVATAPGPARALLEAGGFHVLWRLPLDPAATPMGVALALGAL
CQGIRHVDVLRVFLTRWEGDPAGGVAGAADNLADGAVGGAGGLARLGGYE
ACASVLSRQVSHPAALSRGRSIMQYVALVECLQLVRSLAAKVGTVAAAAA
AAAAAATGEAGSDGGVLADGPVAVKGMEELAHALGALEALLSEGAGDTSA
SGIQPGIRKGDRKRRLQGFEVLLAKADAESGDGASTANGNAPRAADNADP
NVAAAISDHLGREAARDKRPRGGLAPSLVALLWEHQLPAALAAGVASAAL
ASEKAAAASAAAVMSRGGKDAAGAGGGGAGGEGPASAAAALVFAAVRRVA
LRLLRGAGDPLSGALVFAGQPRSTAALTFALDPSALATPVGPEGSATMEA
LADGLDE
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