prot_H-canaliculatus_F_contig1280.2332.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1280.2332.1
Unique Nameprot_H-canaliculatus_F_contig1280.2332.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length732
Homology
BLAST of mRNA_H-canaliculatus_F_contig1280.2332.1 vs. uniprot
Match: D7FK81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK81_ECTSI)

HSP 1 Score: 583 bits (1503), Expect = 8.830e-201
Identity = 290/450 (64.44%), Postives = 362/450 (80.44%), Query Frame = 0
Query:  278 PTKTAYHSMMSGLRREEKWESIRKVINALVEDGLIPTEAGFAFGFMSARRLCDPQLATMLLERRNQAGLTPRQDFFVNVMVTLGEAGKSDEVLDVWRQLVCLQGIEGVTIRPETFFLAMRHAVKVKAWDEVEAIIGMIQDDGRPIDEKVHNVLLGRRQDITAVKD---VERLLVVLENMEIQSGIELKPISQLHLAVLCADVKMHDRAMPLFDAARSAGVTLGKFHRPALLSTLVAVGKLPEAKAEWTKATWAHKRDFTGSTLQLFMRVAERLGDADMALELHHESFKAQKRYARWFHPIALQVLAEAGRLEEAFGIAETLRSRGQPKLPPRSYDILCQCCKERGDKESIVKVVETMRKGNLSMYLPPPNVLGFVVEAFIERGKAKELISLFDRMRAQRLQPDPEVYALLAGAAVDANDHEKAGIFLEMARKGGLEPSPRAVAFAEGDAP 724
            PTK AY SM+SGLR  E W+ I   IN ++E+ ++PTEAGFA GFM+AR+L D + A MLLERR+QAG+ PRQDFFVNVMVTLGEAGK ++ L+ WR+LVC+QGI+G+ IRPETF+LA+R AVK+KAWDEVEAIIGM+Q+DGRP+DEKVHNVL+GRRQ ++  KD   VERLL VL+ ME  SG  L P+ QL LAV+C+D  MH RAMPLF++A+  GV  GKFH+P LLSTLVA+GK   A+ EW +ATWA+K++FTGST Q+FM+ AE L DAD ALELH +S + ++++ RWFHPIALQVLAEAGRLEEAF IAETLR+ G PKLPP SY +LC+CCK+ G+K  +VKVV+TMRKG +S+YLPPP+VLGFVVEAFIE+G   E+++LF+RMRAQR+QP+PEVY LLA AA  AND  +   F EMA KGG + S  A+AF + +AP
Sbjct:    3 PTKVAYQSMISGLRIGEDWQGILTTINEMLEEEVVPTEAGFAVGFMTARKLGDVEFAKMLLERRSQAGMPPRQDFFVNVMVTLGEAGKPEDFLEYWRRLVCVQGIDGLGIRPETFYLALRTAVKIKAWDEVEAIIGMMQEDGRPMDEKVHNVLMGRRQAVS--KDPAHVERLLKVLQQMEAYSGRGLTPMCQLQLAVVCSDAGMHARAMPLFESAQREGVLFGKFHKPPLLSTLVALGKFKRARTEWRQATWANKKEFTGSTFQVFMKAAEGLKDADWALELHEQSLEGKQKHGRWFHPIALQVLAEAGRLEEAFRIAETLRTSGHPKLPPTSYHVLCRCCKQHGEKALVVKVVQTMRKGTMSLYLPPPDVLGFVVEAFIEKGIPGEVLTLFERMRAQRIQPNPEVYVLLADAAAAANDLPQTVHFAEMAEKGGRKASAGALAFTQNNAP 450          
BLAST of mRNA_H-canaliculatus_F_contig1280.2332.1 vs. uniprot
Match: D7FK78_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK78_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 1.100e-52
Identity = 151/462 (32.68%), Postives = 229/462 (49.57%), Query Frame = 0
Query:  150 ASNNPDAIQEALGLLEAGRAVGVNNLAVYNAIFRFLC----MSTKASGTIAEVLEQMKRDG-ITPDLETYNLIIFGYANGKEVASAQRTYGELEASGLEPNDITLSNMIVAHSWGNVKDMMRIFYVLQSKEFKPTKTAYHSMMSGLRREEKWESIRKVINALVEDGLIPTEAGFAFGFMSARRLCDPQLATMLLERRNQAGLTPRQDFFVNVMVTLGEAGKSDEVLDVWRQLVCLQGIEGVTIRPETFFLAMRHAVKVKAWDEVEAIIGMIQDDGRPIDEKVHNVLLGRRQ--DITAVK---DVERLLVVLENMEIQSGIELKPISQLHLAVLCADVKMHDRAMPLFDAARSAGVTLGKFHRPALLSTLVAVGKLPEAKAEWTKATWAHKRD-FTGSTLQLFMRVAERLGDADMALELHHESFKAQKRYARWFHPIALQ----VLAEAGRLEEAFGIAETLR 596
            ASN       A+ LLE GR  G+ ++ VYN + + +     M+      +  + EQM  D  + P+  TY+ +I+GY+ G++   A R   E+   GL+P   TLS+MIVAHSWG+V+DM R+   ++ K + PT+ A  +M+  LRR E WE I     A++E+G   TEAG      +A    +   A  LL    +    P++  +V VMV L  A + +E L  WR+LV L G+  V +  +T+ LA+  AVK++ WDE+EAI+ M+Q       + V + +   R   D+ + +   D  RL  +   +  +     + +  LH A+  A  +   +AM  FD A +    LG      L+ +L  V +  E K  WT+ T +     F  + L      A  L DAD ALELH  S  + +R A    P   Q    VL +AGRLEEA  + +  R
Sbjct:   37 ASNGNGPWWLAVHLLEKGRQNGIKDVKVYNTVLKMIATDERMTEDKMKEMERLFEQMTEDDELEPEALTYSHLIYGYSQGRKEGEAVRLLEEMTVKGLQPERKTLSSMIVAHSWGSVEDMRRVSSEMREKGWTPTQRANSAMIGALRRAEDWEGILDTTRAMLENGQTMTEAGLVVAIKAAANAGNAGFARELLLTHGKNKHRPQEQLYVCVMVALRNACQHEECLACWRELVLLDGLGDVKLNGKTYNLALTSAVKMERWDEMEAILDMMQA------KAVESTVATWRSMVDVWSAEETGDEGRLDRIFGEIHRRQWRPDRAVG-LHAAMAYARCRAWVKAMAWFDPALAEDNKLGPNETELLVMSLAGVERYGEVKEVWTRNTGSKDASVFRPAVLLTMAEAARELDDADWALELH--SVASSRRGAGVAAPRLWQDVVGVLTKAGRLEEAADVLQQTR 489          
BLAST of mRNA_H-canaliculatus_F_contig1280.2332.1 vs. uniprot
Match: D8LG81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG81_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 1.230e-51
Identity = 159/550 (28.91%), Postives = 270/550 (49.09%), Query Frame = 0
Query:  135 GLVKGIERVTYATNSASNNPDAIQEALGLLEAGRAVGVNNLAVYNAIFRFLCM----STKASGTIAEVLEQMKRDGITPDLETYNLIIFGYANGKEVASAQRTYGELEASGLEPNDITLSNMIVAHSWGNVKDMMRIFYVLQSKEFKPTKTAYHSMMSGLRREEKWESIRKVINALVEDGLIPTEAGFAFGFMSARRLCDPQLATMLLERRNQAGLTPRQDFFVNVMVTLGEAGKSDEVLDVWRQLVCLQGIEGVTIRPETFFLAMRHAVKVKAWDEVEAIIGMIQDDGR-PIDEKVHNVLLGRRQDITA--VKDVERLLVVLENMEIQSGIELKPISQLHLAVLCADVKMHDRAMPLFDAARSAGVTLGKFHRPALLSTLVAVGKLPEAKAEWTK---ATWAHKRDFTGSTLQLFMRVAERLGDADMALELHHESFKAQKRYARWFHPIALQVLAEAGRLEEAFGI-----AETLRSRGQPKLPPRSYDILCQCCKERGDKESIVKVVETMRKGNLSMYLPP--PNVLGFVVEAFIERGKAKELISLFD 667
            GLV+ I+R+  A     N    +   + +L+ GR  G+  L VY A+ + L      S  A+  +  VLE+M+ DG+ PD+ TYN I+  +A      +A   + E+ + G+EPN  T S+MIVAHS G    M R    + +K ++ ++TA   M++ +     ++ +   I  + E+  +PTEA F + + +A  L   + A  L   R +AGL P +  +V +M+ L +AGK++E L+ WRQLVC+ G+ GV I PET+ LA++  + V   DE+EA++ M++     P DE     L G  +  T    +  +R    +     +SG           A   A   +   A  LF    +    L       L+ +   +G+  E K  W++   A  A+K   +   L+  ++ A+ LGD D ALE+   + +A KR       + +++L EAGR +EA  +     A  LR+    ++    Y++  + C++ GD E  ++  + MR  +    L    P+V+ F+++A  + G+A E+   FD
Sbjct:  117 GLVRRIKRLAGA-----NKRIKMGLVIQILDEGRRQGIKELVVYKAVLKQLLSTYGESKDAAQNLERVLERMEEDGLQPDVTTYNHILDFHALLHNSEAAVAVHEEMLSRGVEPNQRTASHMIVAHSRGCHDTMYRAVEEMYAKGWQGSRTACLGMIAVMGFRRDYDGVLYTIRRMREESKLPTEAAFVWAYRAAEHLGQVETAKQLFHHRAEAGLPPAEYVYVKMMLILMKAGKAEECLEYWRQLVCVHGLNGVVIHPETYNLAIKCTMVVDNQDEMEAVLAMMEAQRVVPTDETYAAALGGLEKWFTPHRAQGAQRAFEAIA----RSGPPPSMRVLQRKAKGWAHAGLWQEAEQLFSLVLAENGKLSNSEWKCLMMSQFYLGRFAEVKKSWSRNVEALEANKAGHSHLKLEYSLKAAKALGDVDWALEVRDAASEAGKRSVH-LDRVLVEILLEAGRPQEARDVLKEWEAVALRA-SSARVFQGVYELALESCEKSGDVELGLQFFDGMRSASPPYRLRSSCPSVV-FILKALKDAGRAHEVAPFFD 654          
BLAST of mRNA_H-canaliculatus_F_contig1280.2332.1 vs. uniprot
Match: A0A6H5KYF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF7_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.240e-51
Identity = 160/554 (28.88%), Postives = 273/554 (49.28%), Query Frame = 0
Query:  136 LVKGIERVTYATNSASNNPDAIQEALGLLEAGRAVGVNNLAVYNAIFRFLCMSTKASGTIAE----VLEQMKRDGITPDLETYNLIIFGYANGKEVASAQRTYGELEASGLEPNDITLSNMIVAHSWGNVKDMMRIFYVLQSKEFKPTKTAYHSMMS--GLRREEKWESIRKVINALVEDGLIPTEAGFAFGFMSARRLCDPQLATMLLERRNQAGLTPRQDFFVNVMVTLGEAGKSDEVLDVWRQLVCLQGIEGVTIRPETFFLAMRHAVKVKAWDEVEAIIGMIQDDGR-PIDEKVHNVLLGRRQDITA--VKDVERLLVVLENMEIQSGIELKPISQLHLAVLCADVKMHDRAMPLFDAARSAGVTLGKFHRPALLSTLVAVGKLPEAKAEWT---KATWAHKRDFTGSTLQLFMRVAERLGDADMALELHHESFKAQKRYARWFHPIALQVLAEAGRLEEAFGIA---ETLRSRGQP-KLPPRSYDILCQCCKERGDKESIVKVVETMRKGNLSMYLPP--PNVLGFVVEAFIERGKAKELISLFDRMRA 671
            LV+ I+R+  A     N    ++  + +L+ GR  G+  L VY A+ + L  + + S   A+    V+E+M+ DG+ PD+ TYN I+  +A      +A   Y E+ + G+EPN  T S+MIVAHS G    M R    + +K ++ ++ A   M++  G+RR+  ++ +   I  + E+  +PTEA F + + +A  L   + A  L + R +AGL P +  +V +M  L +AGK++E L+ WRQLVC+ G  GV I PET+ LA++  + V   DE+EA++ M++     P D+     L G  +  T    +  +R    +     +SG           A  CA   +   A  LF    +    L       L+ +   + +  E K  W+   K    +K   +   L+  ++ A+ LGD D ALE+   + +A KR       + +++L EAGR +EA  +    E L  R    ++    Y++  + C++ GD E  ++  + MR  +    L    P+V  F+++A  + G+A+E++S FD   A
Sbjct:  118 LVRRIKRLAGA-----NKRTKMRLVIQILDEGRQQGIKELVVYKAVLKQLLTTYRESKDAAQNLERVIERMEEDGLQPDVTTYNHILDLHALLHNSEAAVAVYEEMLSRGVEPNQRTASHMIVAHSRGCHDAMYRAVEEMYAKGWQGSRVACLGMIAVMGIRRD--YDGVLYTIRRMREESKLPTEAAFVWAYRAAENLGQVETAKQLFQHRAEAGLPPAEYVYVKMMSILMKAGKAEECLEYWRQLVCVHGFNGVVIHPETYNLAIKCTMVVGNQDEMEAVLAMMEAQRVVPTDDTYSAALGGLEKWFTPHRARGAQRAFEAIA----RSGPPPSTRVLQRKAKGCAHAGLWQEAEELFSLVLAENGKLSNSDWKCLMMSQFYLERFGEVKKSWSRSVKGLEVNKAGHSHRKLEYSLKAAKALGDVDWALEVRDAASEAGKRSVH-LDRVWVEILLEAGRPQEARDVLKEWEALALRASSARVFQGVYELALESCEKSGDVELGLEFFDGMRSASPPYRLRSSCPSV-AFILKALKDAGRAEEMVSFFDEFLA 658          
BLAST of mRNA_H-canaliculatus_F_contig1280.2332.1 vs. uniprot
Match: D7FK82_ECTSI (Pentatricopeptide (PPR) repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK82_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 2.310e-28
Identity = 68/142 (47.89%), Postives = 97/142 (68.31%), Query Frame = 0
Query:  131 DSAAGLVKGIERVTYA------TNSASNNPDAIQEALGLLEAGRAVGVNNLAVYNAIFRFLCMSTKASGTIAEVLEQMKRDGITPDLETYNLIIFGYANGKEVASAQRTYGELEASGLEPNDITLSNMIVAHSWGNVKDMMR 266
            D  AGLV   ER+ Y        ++ +N   A +E L LL+A R+ G  +  +Y A+F+ L ++T A+  I+ + EQMK+DGI PD+ETYNLII+GYA+ K+VA A+RTY EL +SGLE N+ TLSNM+VA+SW ++ +M R
Sbjct:  107 DDVAGLV---ERLNYLGTQNRDNSNRNNGASAAKEGLQLLQAARSRGTKDARLYKAVFKLLSVNTNAAA-ISSLSEQMKQDGIKPDVETYNLIIYGYASSKDVAGARRTYEELLSSGLEANETTLSNMVVANSWKDIDEMRR 244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1280.2332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FK81_ECTSI8.830e-20164.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK78_ECTSI1.100e-5232.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LG81_ECTSI1.230e-5128.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYF7_9PHAE1.240e-5128.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK82_ECTSI2.310e-2847.89Pentatricopeptide (PPR) repeat-containing protein ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 641..729
e-value: 2.4E-6
score: 29.3
coord: 124..257
e-value: 5.1E-14
score: 54.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 258..438
e-value: 1.1E-13
score: 53.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 174..219
e-value: 3.2E-6
score: 27.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 10.128
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..313
score: 8.78
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 568..602
score: 5.557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 677..711
score: 7.07
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 174..209
score: 8.736
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 604..638
score: 6.763
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 642..676
score: 7.695
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 611..712
coord: 259..388
coord: 172..253
coord: 384..598

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1280contigH-canaliculatus_F_contig1280:12500..24404 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1280.2332.1mRNA_H-canaliculatus_F_contig1280.2332.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1280 11826..24521 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1280.2332.1 ID=prot_H-canaliculatus_F_contig1280.2332.1|Name=mRNA_H-canaliculatus_F_contig1280.2332.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=732bp
MLRVRSLAIRKASVLVRAFVADTGTEGSKREQHHALDNKRRQCHRAHGGE
PSTFHARALRYLHSDAAANQGQRAEDLQEDTSVTFVATDADEKAEPLAKL
ERQVGTVQEEEHEDAQEQPHTSPAEQEHEADSAAGLVKGIERVTYATNSA
SNNPDAIQEALGLLEAGRAVGVNNLAVYNAIFRFLCMSTKASGTIAEVLE
QMKRDGITPDLETYNLIIFGYANGKEVASAQRTYGELEASGLEPNDITLS
NMIVAHSWGNVKDMMRIFYVLQSKEFKPTKTAYHSMMSGLRREEKWESIR
KVINALVEDGLIPTEAGFAFGFMSARRLCDPQLATMLLERRNQAGLTPRQ
DFFVNVMVTLGEAGKSDEVLDVWRQLVCLQGIEGVTIRPETFFLAMRHAV
KVKAWDEVEAIIGMIQDDGRPIDEKVHNVLLGRRQDITAVKDVERLLVVL
ENMEIQSGIELKPISQLHLAVLCADVKMHDRAMPLFDAARSAGVTLGKFH
RPALLSTLVAVGKLPEAKAEWTKATWAHKRDFTGSTLQLFMRVAERLGDA
DMALELHHESFKAQKRYARWFHPIALQVLAEAGRLEEAFGIAETLRSRGQ
PKLPPRSYDILCQCCKERGDKESIVKVVETMRKGNLSMYLPPPNVLGFVV
EAFIERGKAKELISLFDRMRAQRLQPDPEVYALLAGAAVDANDHEKAGIF
LEMARKGGLEPSPRAVAFAEGDAPRQAEGAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf