prot_H-canaliculatus_F_contig1280.2331.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig1280.2331.1
Unique Nameprot_H-canaliculatus_F_contig1280.2331.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length245
Homology
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BLAST of mRNA_H-canaliculatus_F_contig1280.2331.1 vs. uniprot
Match: D7FK97_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK97_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 4.480e-33
Identity = 115/175 (65.71%), Postives = 126/175 (72.00%), Query Frame = 0 
Query:    7 ETESSASASKVARVGDEDGVSAGVGAKAXXXXXXXXGNKRLCTFYLKGRCEKGEECTFSHDVERKHXXXXXXXXXXXXXXXXXXXXXXARDKARLEAGNTAADDGTASKXXXXXXXXXXXXXXXXXXXXXXXXKPTLLRKLLAPQVYRESSIALQAVRFIVQSNFFMDVADPTAG 181
            E + + S+ KVARVGDE  V  G G +         GNKRLCTFYLKGRC+KGE CTFSHDVERK+XXXXXXXXXXXXXXXXXXXXXXAR+KAR EAG+TAAD+    K            XXXXXXX     KPTLLRKLLAPQ++RESSIALQAVRFIVQS FF D A    G
Sbjct:  266 EEDGAGSSLKVARVGDESAVVQGEGTRKVAGAGG--GNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXXAREKARAEAGDTAADE----KLTKAEKSAKNKKXXXXXXXVSAASKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGG 434
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BLAST of mRNA_H-canaliculatus_F_contig1280.2331.1 vs. uniprot
Match: A0A6H5JLR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLR5_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.550e-31
Identity = 122/197 (61.93%), Postives = 134/197 (68.02%), Query Frame = 0 
Query:    7 ETESSASASKVARVGDEDGVSAGVGAKAXXXXXXXXGNKRLCTFYLKGRCEKGEECTFSHDVERKHXXXXXXXXXXXXXXXXXXXXXXARDKARLEAGNTAADDGTASKXXXXXXXXXXXXXXXXXXXXXXXXKPTLLRKLLAPQVYRESSIALQAVRFIVQSNFFMDVADPTAGD---------ATAPGEPPVSPS 194
            E + + S+ KVARV DE  V  G G           GNKRLCTFYLKGRC+KGE CTFSHDVERK+XXXXXXXXXXXXXXXXXXXXX AR+KAR EAG+ AAD+    K           XXXXXXXXXXXX KPTLLRKLLAPQ++RESSIALQAVRFIVQS FF D A    G          A+AP  P   P+
Sbjct:  249 EEDGAGSSLKVARVDDEGAVGQGEGTTKVAGAGG--GNKRLCTFYLKGRCDKGEACTFSHDVERKNXXXXXXXXXXXXXXXXXXXXXEAREKARAEAGDNAADE----KLTKTERSTSNKXXXXXXXXXXXXSKPTLLRKLLAPQLHRESSIALQAVRFIVQSKFFQDDAAAAGGXXXXXXXPETASAPPSPSSDPA 439
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1280.2331.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK97_ECTSI4.480e-3365.71Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5JLR5_9PHAE2.550e-3161.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 69..93
e-value: 1.2
score: 15.5
coord: 43..68
e-value: 1.2E-4
score: 31.4
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 42..69
score: 15.469
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 72..94
score: 11.657
IPR041367E3 ligase, CCCH-type zinc fingerPFAMPF18044zf-CCCH_4coord: 46..67
e-value: 1.0E-5
score: 25.2
NoneNo IPR availableGENE3D4.10.1000.10coord: 38..133
e-value: 5.6E-15
score: 57.1
NoneNo IPR availablePANTHERPTHR11224MAKORIN-RELATEDcoord: 45..235
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 44..67
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 70..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig1280contigH-canaliculatus_F_contig1280:8278..10153 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig1280.2331.1mRNA_H-canaliculatus_F_contig1280.2331.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig1280 7156..11675 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig1280.2331.1 ID=prot_H-canaliculatus_F_contig1280.2331.1|Name=mRNA_H-canaliculatus_F_contig1280.2331.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=245bp
MEGQEGETESSASASKVARVGDEDGVSAGVGAKAEPGAGAGAGNKRLCTF
YLKGRCEKGEECTFSHDVERKHCSYFISGRCHRGRACLFMHDTEARDKAR
LEAGNTAADDGTASKSTTTADKSAKHKKAAAAAVAAAASKPTLLRKLLAP
QVYRESSIALQAVRFIVQSNFFMDVADPTAGDATAPGEPPVSPSRSPPPS
SAPTAASSCAATAEEVDGLPSSSASPTSTIAPAEKAKSKDGAVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR041367Znf-CCCH_4
IPR000571Znf_CCCH