prot_H-canaliculatus_F_contig12793.2320.1 (polypeptide) Hapterophycus canaliculatus Oshoro5f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-canaliculatus_F_contig12793.2320.1
Unique Nameprot_H-canaliculatus_F_contig12793.2320.1
Typepolypeptide
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Sequence length226
Homology
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 361 bits (926), Expect = 1.490e-113
Identity = 180/224 (80.36%), Postives = 195/224 (87.05%), Query Frame = 0
Query:    1 GFELPELLSTDECCLDKALMNEIFEELSAEGHHFSVTNSAPEASECPVLLLPPDVKLGDPVKANQDSPCLKAAVDAIRTHALANGSIIGLDIEWEISAAGAPVNPPATIQLAAGKAVVIFHVLHGQRAVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRRGLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQK 224
            GF+LP L+STDECC DKAL+NEIFEEL++EGH FSVTNS P ASECPVL LPPDV LG+PVKANQDSPCLKAAVDAIR  A AN  ++ LDIEWEISAAGAP NPPATIQLAAGK VVIFHVLHGQR+VP ELP  LVDLLED KLTKTGVGIKGDCTRL+ FYGV+VA  VDLRSLAVERKVE+GLRRGLADLCVHLLG  LPKDP VR+S+WN   LS +QK
Sbjct:  167 GFKLPRLVSTDECCNDKALLNEIFEELASEGHQFSVTNSVPIASECPVLHLPPDVVLGEPVKANQDSPCLKAAVDAIRMQAEANNGLLALDIEWEISAAGAPANPPATIQLAAGKRVVIFHVLHGQRSVPAELPDPLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQK 390          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A6H5KFL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL9_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 8.950e-34
Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 0
Query:    1 GFELPELLSTDECCLDKALMNEIFEELSAEGHHFSVTNSAPEASECPVLLLPPDVKLGDPVKANQDSPCLKAAVDAIRTHA 81
            GF+LP L+STDECC DKAL+N+IFEEL++EGH FSVTNS P ASECPVL LPPDV LG+PVKANQDSPCLKAAVD  R  A
Sbjct:  188 GFKLPRLVSTDECCNDKALLNDIFEELASEGHQFSVTNSVPIASECPVLQLPPDVVLGEPVKANQDSPCLKAAVDTTRMQA 268          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A2I0BFU7_9ASPA (Werner Syndrome-like exonuclease n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0BFU7_9ASPA)

HSP 1 Score: 94.0 bits (232), Expect = 4.480e-20
Identity = 56/138 (40.58%), Postives = 78/138 (56.52%), Query Frame = 0
Query:   87 IIGLDIEWEISAAGAPVNPPATIQLAAGKAVVIFHVLHGQRAVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRR-GLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            I+GLD EW  S +    NP A +QL  G+  +IF +L+       E+P+ L+D L DD+ T  GVGIK D  RL D   ++V   VDL  +A E+     LRR GLADL + ++ V + K   V +SRW+   LS +Q
Sbjct:   53 IVGLDCEWRPSFSRVQ-NPVALLQLCVGRRCLIFQLLYAD-----EIPSSLLDFLNDDRFTFVGVGIKNDAERLYDERYLEVCNAVDLSEIAAEKMERPDLRRMGLADLAMEVVAVEVRKPKHVTMSRWDNYHLSLDQ 184          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.390e-18
Identity = 58/141 (41.13%), Postives = 78/141 (55.32%), Query Frame = 0
Query:   85 GSIIGLDIEWEISAAGAPVNPPATIQLAAGKAVV-IFHVLHGQRAV-PGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRRGLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            G ++G+D EWE    G+      T+QLA       +FH+  G R   P      L  LL D  +TK GV +KGD +RL   YGV+  G+VDLRS A    V++  R  LA +    LG SL K+P+VR SRW+ A+L+Q Q
Sbjct:   87 GHVLGMDCEWEPPFDGSSEGAVCTLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPCR-SLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQ 226          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A2N9HCJ7_FAGSY (3'-5' exonuclease domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9HCJ7_FAGSY)

HSP 1 Score: 90.1 bits (222), Expect = 1.410e-18
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 0
Query:   87 IIGLDIEWEISAAGAPVNPPATIQLAAGKAVVIFHVLHGQRAVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRRGLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            I+GLD+EW  +      NP AT+QL  G+  ++F +++         P  L+D L D++ T  GVGI  D  +L + YG++VA VVDLRSLAVE         GL  L   +LG+ + K  +V +SRW+   L+ EQ
Sbjct:   59 IVGLDVEWRPNNRHFE-NPAATLQLCVGRRCLVFQLIYASY-----FPDSLIDFLGDERFTFVGVGIASDVEKLLEDYGLKVANVVDLRSLAVEMGNRDLRNAGLKGLARAVLGMEIHKPRSVTLSRWDREFLTYEQ 189          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: F2EF68_HORVV (Predicted protein n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2EF68_HORVV)

HSP 1 Score: 90.1 bits (222), Expect = 1.440e-18
Identity = 55/138 (39.86%), Postives = 77/138 (55.80%), Query Frame = 0
Query:   87 IIGLDIEWEISAAGAPVNPPATIQLAAGKAVVIFHVLHGQRAVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRR-GLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            I+GLD+EW  S  G   NP A +QL  G+  +IF +LH        +P  L   L D      GVG++ D  RL+D +G++VA VVDLRSLA +      LR+ GL D+   ++G +L K   V +  W+  +LSQEQ
Sbjct:   47 IVGLDVEWRPSF-GRAQNPVALLQLCVGRRCLIFQLLHADF-----IPLALRRFLADPDFRFVGVGVQNDVDRLNDDHGLEVANVVDLRSLAADEMRRPWLRQAGLKDVAGVVMGANLHKPRRVTMGPWDACRLSQEQ 178          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A0L9U4N3_PHAAN (3'-5' exonuclease domain-containing protein n=3 Tax=Vigna TaxID=3913 RepID=A0A0L9U4N3_PHAAN)

HSP 1 Score: 87.8 bits (216), Expect = 1.490e-17
Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = 0
Query:   85 GSIIGLDIEWEISAAGAPVNPPATIQLAAGKAVVIFHVLHGQRAVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLR-------RGLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            G ++GLD+EW  +      NP AT+QL  G A ++F ++H            L   L+D  +T  GVGI+ D  +L   YG+ VA V DLRSLA     E  LR        GL  LC+H+LGV + K  ++  S W+  +L+ EQ
Sbjct:   69 GLMVGLDVEWRPNTQPNTQNPVATLQLCVGHACLVFQIIHSPF-----FSHSLDSFLQDPNVTFFGVGIRADAEKLLRDYGLYVANVYDLRSLA-----EAKLRGYPHLSQAGLKTLCLHVLGVDVEKPQSITRSFWDNTRLTAEQ 204          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A4D6NDC0_VIGUN (Werner syndrome ATP-dependent helicase n=2 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6NDC0_VIGUN)

HSP 1 Score: 84.7 bits (208), Expect = 2.170e-16
Identity = 55/146 (37.67%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   85 GSIIGLDIEWEISAAGAPVNPPATIQLAAGKAVVIFHVLHGQRAVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRR-------GLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            G ++GLDIEW         NP AT+QL  G A ++F ++H            L   L+D  +T  GVGI+ D  +L   YG+ VA V DLRSLA     EV L R       GL  LC+H+LG  + K  ++  S W+   L+ EQ
Sbjct:   70 GLMVGLDIEWRPITQPNTQNPVATLQLCVGNACLVFQIIHAPY-----FSHSLGSFLQDLNVTFLGVGIRADAEKLLRDYGLHVANVCDLRSLA-----EVKLWRYPHLRQAGLKTLCLHVLGAEVEKPQSISRSLWDNRCLTAEQ 205          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: A0A8C4QW69_EPTBU (Exonuclease 3'-5' domain containing 2 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QW69_EPTBU)

HSP 1 Score: 81.6 bits (200), Expect = 2.780e-14
Identity = 46/96 (47.92%), Postives = 58/96 (60.42%), Query Frame = 0
Query:  128 AVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRRGLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            AV   LPT L +LL DD + KTGVG+  D  RL   YG+ VAG VDLR +AV R+ ++    GL  L    LG+ L KD A+R S W+  +LS EQ
Sbjct:  173 AVRSSLPTSLCNLLGDDMVLKTGVGVWEDAARLERDYGLLVAGCVDLRHVAVRRRPQIS-GEGLKSLAQDELGIVLDKDLALRCSNWDAPELSPEQ 267          
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Match: UPI00081150E8 (exonuclease 3'-5' domain-containing protein 2-like n=1 Tax=Rhagoletis zephyria TaxID=28612 RepID=UPI00081150E8)

HSP 1 Score: 72.0 bits (175), Expect = 8.070e-12
Identity = 52/140 (37.14%), Postives = 75/140 (53.57%), Query Frame = 0
Query:   87 IIGLDIEWEISAAGAPVNPPATIQLAAGKAV-VIFHVLHGQRAVPGELPTELVDLLEDDKLTKTGVGIKGDCTRLSDFYGVQVAGVVDLRSLA--VERKVEVGLRRGLADLCVHLLGVSLPKDPAVRISRWNTAKLSQEQ 223
            ++G D EW     G    P A +QL++ K +  +F + + Q     ++P +L DLLEDDK+ K GVG + D  +L+  YGV VA  +DLR LA  V +K E     GLA +   LL V L K   +  S W    L+++Q
Sbjct:    7 VLGFDCEWVT--VGGKRRPVALLQLSSQKGLCALFRLCNLQ-----QIPKDLRDLLEDDKVIKVGVGTQDDAHKLAYDYGVGVASTLDLRYLAALVNQKPE-----GLAKMAKSLLDVHLDKHWRLSCSDWEAKVLNEKQ 134          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12793.2320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JET4_9PHAE1.490e-11380.363'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KFL9_9PHAE8.950e-3477.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2I0BFU7_9ASPA4.480e-2040.58Werner Syndrome-like exonuclease n=1 Tax=Apostasia... [more]
A0A6H5JRJ6_9PHAE1.390e-1841.133'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A2N9HCJ7_FAGSY1.410e-1838.693'-5' exonuclease domain-containing protein n=2 Ta... [more]
F2EF68_HORVV1.440e-1839.86Predicted protein n=2 Tax=Hordeum vulgare subsp. v... [more]
A0A0L9U4N3_PHAAN1.490e-1736.993'-5' exonuclease domain-containing protein n=3 Ta... [more]
A0A4D6NDC0_VIGUN2.170e-1637.67Werner syndrome ATP-dependent helicase n=2 Tax=Vig... [more]
A0A8C4QW69_EPTBU2.780e-1447.92Exonuclease 3'-5' domain containing 2 n=2 Tax=Epta... [more]
UPI00081150E88.070e-1237.14exonuclease 3'-5' domain-containing protein 2-like... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 81..223
e-value: 7.5E-8
score: 32.3
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 52..225
e-value: 9.6E-36
score: 124.8
NoneNo IPR availablePANTHERPTHR13620:SF55coord: 82..224
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 82..224
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 81..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig12793contigH-canaliculatus_F_contig12793:1032..1709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2022-09-29
Diamond blastp: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-16
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig12793.2320.1mRNA_H-canaliculatus_F_contig12793.2320.1Hapterophycus canaliculatus Oshoro5f femalemRNAH-canaliculatus_F_contig12793 1032..1709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-canaliculatus_F_contig12793.2320.1 ID=prot_H-canaliculatus_F_contig12793.2320.1|Name=mRNA_H-canaliculatus_F_contig12793.2320.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=226bp
GFELPELLSTDECCLDKALMNEIFEELSAEGHHFSVTNSAPEASECPVLL
LPPDVKLGDPVKANQDSPCLKAAVDAIRTHALANGSIIGLDIEWEISAAG
APVNPPATIQLAAGKAVVIFHVLHGQRAVPGELPTELVDLLEDDKLTKTG
VGIKGDCTRLSDFYGVQVAGVVDLRSLAVERKVEVGLRRGLADLCVHLLG
VSLPKDPAVRISRWNTAKLSQEQKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom